TMEM126A (transmembrane protein 126A) - Rat Genome Database

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Gene: TMEM126A (transmembrane protein 126A) Pan paniscus
Analyze
Symbol: TMEM126A
Name: transmembrane protein 126A
RGD ID: 11692660
Description: INVOLVED IN mitochondrial protein quality control (ortholog); protein insertion into mitochondrial inner membrane from matrix (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH exudative vitreoretinopathy 1 (ortholog); genetic disease (ortholog); Hereditary Optic Atrophies (ortholog); FOUND IN mitochondrial inner membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2986,567,317 - 86,579,574 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11187,620,767 - 87,630,548 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,703,855 - 80,712,459 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,312,434 - 84,321,037 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1184,312,434 - 84,321,037 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TMEM126A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2986,567,317 - 86,579,574 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11187,620,767 - 87,630,548 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,703,855 - 80,712,459 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11184,312,434 - 84,321,037 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1184,312,434 - 84,321,037 (+)Ensemblpanpan1.1panPan2
TMEM126A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381185,647,967 - 85,656,542 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1185,647,967 - 85,656,547 (+)EnsemblGRCh38hg38GRCh38
GRCh371185,359,011 - 85,367,586 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361185,036,693 - 85,045,235 (+)NCBINCBI36Build 36hg18NCBI36
Celera1182,668,277 - 82,676,912 (+)NCBICelera
Cytogenetic Map11q14.1NCBI
HuRef1181,656,256 - 81,664,891 (+)NCBIHuRef
CHM1_11185,243,754 - 85,252,388 (+)NCBICHM1_1
T2T-CHM13v2.01185,584,644 - 85,593,220 (+)NCBIT2T-CHM13v2.0
Tmem126a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39790,099,908 - 90,106,411 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl790,099,908 - 90,106,437 (-)EnsemblGRCm39 Ensembl
GRCm38790,450,700 - 90,457,203 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl790,450,700 - 90,457,229 (-)EnsemblGRCm38mm10GRCm38
MGSCv37797,599,222 - 97,605,718 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36790,325,904 - 90,332,400 (-)NCBIMGSCv36mm8
Celera787,778,196 - 87,784,676 (-)NCBICelera
Cytogenetic Map7E1NCBI
cM Map750.59NCBI
Tmem126a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81153,837,015 - 153,843,192 (-)NCBIGRCr8
mRatBN7.21144,424,481 - 144,430,730 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,422,703 - 144,430,628 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1152,347,274 - 152,353,446 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01159,528,451 - 159,534,610 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01152,402,370 - 152,408,529 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01156,283,105 - 156,291,057 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1156,283,128 - 156,291,052 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01162,529,113 - 162,537,179 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41147,129,330 - 147,137,259 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11147,207,735 - 147,215,665 (-)NCBI
Celera1142,643,098 - 142,651,027 (-)NCBICelera
Cytogenetic Map1q32NCBI
Tmem126a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554147,216,286 - 7,224,475 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554147,214,408 - 7,224,499 (-)NCBIChiLan1.0ChiLan1.0
TMEM126A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12113,787,074 - 13,795,779 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2113,787,123 - 13,795,739 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2113,653,725 - 13,662,471 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02113,967,872 - 13,976,597 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2113,967,464 - 13,976,562 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12113,756,370 - 13,765,102 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02113,828,697 - 13,837,423 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02113,881,469 - 13,890,217 (-)NCBIUU_Cfam_GSD_1.0
Tmem126a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494771,938,905 - 71,945,739 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493649813,538,565 - 13,545,338 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM126A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl919,576,295 - 19,585,277 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1919,576,241 - 19,585,869 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2921,846,389 - 21,855,417 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM126A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1176,888,688 - 76,897,883 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl176,888,734 - 76,897,841 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604348,824,623 - 48,833,726 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem126a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248454,264,497 - 4,272,973 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000037200   ⟹   ENSPPAP00000014514
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1184,312,434 - 84,321,037 (+)Ensembl
RefSeq Acc Id: XM_003832963   ⟹   XP_003833011
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,567,317 - 86,579,574 (+)NCBI
NHGRI_mPanPan11187,620,767 - 87,630,548 (+)NCBI
Mhudiblu_PPA_v01180,703,879 - 80,712,459 (+)NCBI
PanPan1.11184,312,434 - 84,321,037 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034933479   ⟹   XP_034789370
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2986,570,997 - 86,579,574 (+)NCBI
NHGRI_mPanPan11187,621,970 - 87,630,548 (+)NCBI
Mhudiblu_PPA_v01180,703,855 - 80,712,459 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003833011 (Get FASTA)   NCBI Sequence Viewer  
  XP_034789370 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000014514
  ENSPPAP00000014514.1
Reference Protein Sequences
RefSeq Acc Id: XP_003833011   ⟸   XM_003832963
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AB75 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034789370   ⟸   XM_034933479
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000014514   ⟸   ENSPPAT00000037200


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030419 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000037200.1 UniProtKB/TrEMBL
InterPro TMEM126 UniProtKB/TrEMBL
KEGG Report pps:100978373 UniProtKB/TrEMBL
NCBI Gene TMEM126A ENTREZGENE
PANTHER PTHR16296 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 126A UniProtKB/TrEMBL
Pfam TMEM126 UniProtKB/TrEMBL
UniProt A0A2R9AB75 ENTREZGENE, UniProtKB/TrEMBL