NCAPG2 (non-SMC condensin II complex subunit G2) - Rat Genome Database

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Gene: NCAPG2 (non-SMC condensin II complex subunit G2) Pan paniscus
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Symbol: NCAPG2
Name: non-SMC condensin II complex subunit G2
RGD ID: 11691802
Description: ENCODES a protein that exhibits bHLH transcription factor binding (inferred); enzyme activator activity (inferred); histone deacetylase regulator activity (inferred); INVOLVED IN erythrocyte differentiation (ortholog); inner cell mass cell proliferation (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Kahn-Kahn-Katsanis Syndrome (ortholog); Parkinson's disease (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: condensin-2 complex subunit G2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17161,905,762 - 161,977,093 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7161,905,762 - 161,977,093 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v07150,441,385 - 150,513,391 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
NCAPG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17161,905,762 - 161,977,093 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7161,905,762 - 161,977,093 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v07150,441,385 - 150,513,391 (-)NCBIMhudiblu_PPA_v0panPan3
NCAPG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387158,631,169 - 158,704,804 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl7158,631,169 - 158,704,804 (-)EnsemblGRCh38hg38GRCh38
GRCh377158,423,861 - 158,497,495 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367158,116,764 - 158,190,281 (-)NCBINCBI36hg18NCBI36
Celera7152,856,604 - 152,930,122 (-)NCBI
Cytogenetic Map7q36.3NCBI
HuRef7152,163,223 - 152,236,542 (-)NCBIHuRef
CHM1_17158,432,826 - 158,505,899 (-)NCBICHM1_1
CRA_TCAGchr7v27157,628,658 - 157,701,735 (-)NCBI
Ncapg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912116,368,969 - 116,427,152 (+)NCBIGRCm39mm39
GRCm39 Ensembl12116,369,022 - 116,427,351 (+)Ensembl
GRCm3812116,405,351 - 116,463,532 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12116,405,402 - 116,463,731 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712117,643,875 - 117,702,004 (+)NCBIGRCm37mm9NCBIm37
MGSCv3612116,847,398 - 116,905,738 (+)NCBImm8
Cytogenetic Map12F2NCBI
Ncapg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26137,342,449 - 137,418,083 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl6137,342,943 - 137,415,159 (+)Ensembl
Rnor_6.06144,291,313 - 144,362,454 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6144,291,974 - 144,363,947 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06153,219,779 - 153,291,396 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46143,693,508 - 143,751,084 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16143,699,694 - 143,748,409 (+)NCBI
Celera6135,005,891 - 135,080,045 (+)NCBICelera
Cytogenetic Map6q33NCBI
Ncapg2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955579895,249 - 955,517 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955579896,507 - 955,515 (-)NCBIChiLan1.0ChiLan1.0
NCAPG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11620,649,088 - 20,712,208 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1620,649,489 - 20,712,208 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1621,154,091 - 21,218,358 (-)NCBI
ROS_Cfam_1.01622,380,599 - 22,444,279 (-)NCBI
ROS_Cfam_1.0 Ensembl1622,380,583 - 22,444,286 (-)Ensembl
UMICH_Zoey_3.11620,747,809 - 20,812,041 (-)NCBI
UNSW_CanFamBas_1.01621,332,079 - 21,396,341 (-)NCBI
UU_Cfam_GSD_1.01621,386,219 - 21,450,501 (-)NCBI
Ncapg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118643,581 - 702,013 (+)NCBI
SpeTri2.0NW_004936856567,765 - 625,745 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NCAPG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl18653,224 - 717,205 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.118653,182 - 713,825 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
NCAPG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121126,658,802 - 126,731,005 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl21126,658,702 - 126,728,510 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607223,054,778 - 23,128,409 (-)NCBIVero_WHO_p1.0
Ncapg2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624800432,307 - 494,361 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000060823   ⟹   ENSPPAP00000037921
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7161,905,762 - 161,977,093 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000060826   ⟹   ENSPPAP00000037924
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7161,914,370 - 161,977,093 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000060833   ⟹   ENSPPAP00000037931
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7161,915,173 - 161,974,405 (-)Ensembl
RefSeq Acc Id: XM_003816335   ⟹   XP_003816383
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.17161,905,762 - 161,977,093 (-)NCBI
Mhudiblu_PPA_v07150,441,385 - 150,513,391 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008969402   ⟹   XP_008967650
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.17161,906,063 - 161,977,093 (-)NCBI
Mhudiblu_PPA_v07150,441,385 - 150,513,391 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034965371   ⟹   XP_034821262
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v07150,441,385 - 150,513,391 (-)NCBI
RefSeq Acc Id: XM_034965372   ⟹   XP_034821263
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v07150,454,478 - 150,513,391 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003816383 (Get FASTA)   NCBI Sequence Viewer  
  XP_008967650 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821262 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821263 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003816383   ⟸   XM_003816335
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008967650   ⟸   XM_008969402
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034821262   ⟸   XM_034965371
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034821263   ⟸   XM_034965372
- Peptide Label: isoform X4
RefSeq Acc Id: ENSPPAP00000037931   ⟸   ENSPPAT00000060833
RefSeq Acc Id: ENSPPAP00000037924   ⟸   ENSPPAT00000060826
RefSeq Acc Id: ENSPPAP00000037921   ⟸   ENSPPAT00000060823


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041688 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000037921 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000037924 UniProtKB/TrEMBL
  ENSPPAP00000037931 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000060823 UniProtKB/TrEMBL
  ENSPPAT00000060826 UniProtKB/TrEMBL
  ENSPPAT00000060833 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Condensin2_G2 UniProtKB/TrEMBL
KEGG Report pps:100977342 UniProtKB/TrEMBL
NCBI Gene NCAPG2 ENTREZGENE
Pfam Condensin2nSMC UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R9C7N1_PANPA UniProtKB/TrEMBL
  A0A2R9C7P1_PANPA UniProtKB/TrEMBL
  A0A2R9C7Y8_PANPA UniProtKB/TrEMBL