PDLIM3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 183,236,644 - 183,270,599 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 183,584,749 - 183,618,714 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 177,664,420 - 177,698,364 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 189,880,930 - 189,914,707 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 189,880,938 - 189,914,707 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PDLIM3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 185,500,660 - 185,535,507 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 185,500,660 - 185,535,507 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 186,421,814 - 186,456,661 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 186,659,899 - 186,693,650 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 186,798,059 - 186,831,794 | NCBI | | | | | Celera | 4 | 183,749,238 - 183,781,710 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q35.1 | NCBI | | | | | HuRef | 4 | 182,175,438 - 182,209,519 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 186,398,441 - 186,430,909 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 188,844,192 - 188,876,603 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pdlim3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 46,338,524 - 46,372,672 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 46,338,498 - 46,372,585 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 45,885,487 - 45,919,635 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 45,885,461 - 45,919,548 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 46,970,839 - 47,004,900 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 47,384,302 - 47,418,363 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 48,569,007 - 48,602,415 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | B1.1 | NCBI | | | | | cM Map | 8 | 25.86 | NCBI | | | | |
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Pdlim3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 53,085,020 - 53,116,495 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 46,352,460 - 46,383,680 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 46,352,467 - 46,383,657 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 51,754,729 - 51,785,861 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 55,123,468 - 55,154,656 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 50,394,110 - 50,425,252 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 49,543,140 - 49,574,362 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 49,543,142 - 49,574,390 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 49,271,210 - 49,303,161 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 49,637,068 - 49,668,802 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 49,637,142 - 49,668,877 (-) | NCBI | | | | | Celera | 16 | 44,350,214 - 44,381,388 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | q11 | NCBI | | | | |
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Pdlim3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955403 | 23,546,291 - 23,579,975 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955403 | 23,546,291 - 23,579,975 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PDLIM3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 16 | 45,111,358 - 45,141,444 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 16 | 45,111,372 - 45,140,895 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 45,596,679 - 45,626,635 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 47,324,629 - 47,354,794 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 47,324,611 - 47,354,792 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 16 | 45,292,955 - 45,322,927 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 45,905,420 - 45,935,439 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 46,036,947 - 46,067,096 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pdlim3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404943 | 34,235,812 - 34,265,116 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936554 | 3,844,743 - 3,874,174 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936554 | 3,844,896 - 3,874,168 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PDLIM3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 15 | 46,513,449 - 46,546,507 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 46,516,178 - 46,546,658 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 53,297,824 - 53,328,219 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PDLIM3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 131,443,131 - 131,477,575 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 131,441,674 - 131,477,554 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 111,704,011 - 111,738,337 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pdlim3 (Heterocephalus glaber - naked mole-rat) |
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