CFAP210 (cilia and flagella associated protein 210)

Gene: CFAP210 (cilia and flagella associated protein 210) Pan paniscus

Analyze

Symbol:

CFAP210

Name:

cilia and flagella associated protein 210

RGD ID:

11689355

Description:

ASSOCIATED WITH genetic disease (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CCDC173; cilia- and flagella- associated protein 210; coiled-coil domain containing 173; coiled-coil domain-containing protein 173

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	72,303,928 - 72,357,189 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	72,318,885 - 72,372,147 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	56,915,574 - 56,968,813 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	174,383,533 - 174,436,514 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	174,383,632 - 174,436,413 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

axonemal B tubule inner sheath (IEA,ISO)

axonemal microtubule (IEA)

References

Genomics

Comparative Map Data

CFAP210
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	72,303,928 - 72,357,189 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	72,318,885 - 72,372,147 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	56,915,574 - 56,968,813 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	174,383,533 - 174,436,514 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	174,383,632 - 174,436,413 (-)	Ensembl	panpan1.1		panPan2

CFAP210
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	169,645,425 - 169,694,405 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	169,645,425 - 169,694,405 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	170,501,935 - 170,550,915 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	170,210,181 - 170,259,177 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	164,120,771 - 164,169,738 (-)	NCBI		Celera
Cytogenetic Map	2	q31.1	NCBI
HuRef	2	162,392,410 - 162,441,586 (-)	NCBI		HuRef
CHM1_1	2	170,508,316 - 170,557,264 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	170,122,581 - 170,174,007 (-)	NCBI		T2T-CHM13v2.0

Cfap210
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	69,587,736 - 69,619,873 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	69,588,377 - 69,619,919 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	69,757,392 - 69,789,617 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	69,758,033 - 69,789,575 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	69,596,114 - 69,627,543 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	69,558,872 - 69,590,416 (-)	NCBI		MGSCv36	mm8
Celera	2	71,427,437 - 71,458,651 (-)	NCBI		Celera
Cytogenetic Map	2	C2	NCBI
cM Map	2	40.95	NCBI

Cfap210
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	74,928,368 - 74,962,508 (-)	NCBI		GRCr8
mRatBN7.2	3	54,520,455 - 54,554,677 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	54,520,458 - 54,554,607 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	57,920,956 - 57,955,471 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	66,504,548 - 66,539,061 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	64,266,919 - 64,301,440 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	55,995,728 - 56,030,763 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	55,996,499 - 56,030,744 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	62,608,051 - 62,667,564 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	51,903,511 - 51,937,671 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	51,799,878 - 51,834,043 (-)	NCBI
Celera	3	54,081,052 - 54,115,059 (-)	NCBI		Celera
Cytogenetic Map	3	q21	NCBI

Cfap210
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955449	4,886,220 - 4,911,377 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955449	4,886,108 - 4,912,371 (+)	NCBI	ChiLan1.0	ChiLan1.0

CFAP210
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	14,359,317 - 14,396,166 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	14,359,429 - 14,396,082 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	14,366,911 - 14,408,228 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	14,473,226 - 14,503,459 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	14,476,063 - 14,503,431 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	14,556,653 - 14,598,323 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	14,547,775 - 14,589,050 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	14,658,949 - 14,700,433 (-)	NCBI		UU_Cfam_GSD_1.0

Cfap210
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	131,625,188 - 131,663,846 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936509	179,203 - 218,018 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936509	178,969 - 217,648 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CFAP210
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	75,979,209 - 76,007,159 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	75,980,102 - 76,007,192 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	85,101,126 - 85,127,043 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CFAP210
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	55,174,757 - 55,220,295 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	55,174,315 - 55,220,298 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	144,310,482 - 144,356,034 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cfap210
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624787	7,183,408 - 7,205,619 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624787	7,183,073 - 7,214,625 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003824295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034954454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000058639 ⟹ ENSPPAP00000035750

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	2B	174,383,632 - 174,436,413 (-)	Ensembl

RefSeq Acc Id:

XM_003824295 ⟹ XP_003824343

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	13	72,303,928 - 72,357,189 (-)	NCBI
NHGRI_mPanPan1	2B	72,318,885 - 72,372,147 (-)	NCBI
Mhudiblu_PPA_v0	2B	56,915,574 - 56,968,813 (-)	NCBI
PanPan1.1	2B	174,383,533 - 174,436,514 (-)	NCBI

Sequence:

show sequence

CGGCGGCGTTGCCAAGCAACCGCGTGGTTCGAGTAACAACTCCACCGGCTGGCGTCCGCGGCGC
TTGGCGCCACAGTCACTTTTCCAGATCTAGGAGCACCATGGACACCTCGTCAGAGATGCTGGTA
CGGTTTGGACGGCGCTGTGGACGGGCGAAGGAAAGTACAGAAATAAGAAACTCTGAAGAAGATC
AAGTTCTCTATCTGCCTCTTCTACCTAACAAAGTAGATCTCCAGCAGGTCACCATAATTCCACA
CAATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGT
GCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGACTA
ATACATATGCAGGGATGAAAGAACAGAAACTTGAAGCCAAAAAGAAGCGTGATGAAGAAATAGA
GGCAGAAAGACAAATTCTTGATCTGGAAGAAGAAATATACAAACAAGGAAAAAGAAAAAAGGCC
ATTGAAAATGCAAAGCAATATCAATTTTACCAGACAGAAAGAGTGAAAAACTTTCATTCGGGAC
TTCTTCTTAGTAGAGTTATGAAAGAACGTGATGCCCAGATTGAATTCCGAAAGAGTAAGATAAA
ATCAGATAAAAAATGGGAGGAACAGTTGAAACTCAACATTGAAAAAGCTTTTAAAGAAGAACAA
GAAAAAGCAGAAAAACGACACAGAGAAAGGGTGGCTCTTGCCGAAGATCATCTAAAACAAATAA
AGGAACATGAGGAAGAAGAGGAAAGAAGGAAAAAACATGAAGAAAAAGATGCTGAGGAAATAAA
GCGACAGAATGCATTATATGAAATTGAAATGAGAAAAAAACTAGAAAAGAGAAGAGAAGAGATG
CATGAAAGCAGGAGACGGTTTCTTGAACATATGCAGGATAAACATATTATCAAAGCTGTAGAAC
AGCAGCAGCAAGAGGAAGAAGATGAAAAGATGAGAAAATTCATCAAAGCAAAAAAGCGTCTTAT
ACAAATGGGGAAAGAAAAAGAGGCTGAAACACACAGGCTTATGGAGAAACGAAGAGAAAGAATA
CATAACTTCCTGAGTGAACTGTTGAAAGAGAAACTTGACAATGAAGATATGATTATTGCTAGAG
ATATTGCAGAAGCTGAGGCTGAGTGGGAAAAAGAGAAAGAGAAAAGATGAAAAAACAAAGCAGA
ATTAAAAACAATTGCAGAATATCGAGCCATTGTGATGAAAAATAAGGAGGAAGAAGAAAGAAAA
AGAAAAATAGAGGCTAAAGAACAATTGCTGGCTGTCATGAAAGCAGATCAGATTTTCTGGGAAC
ATGAAAAGGAGAAAAAATGCAAAGCTGATAAAGAACATCAAGAGGTTCAAGATGCCCATATTCA
GCAAATGGCCAAAAATAAGTTTAATGCAAAGCAAGCAAAACAAGCAGAATTAGATTATTGCAGA
CTTACTGAAGCTCTTGTGGCTGAAAAGGAGAAAGAATTTCAGGACTATGCCAGAGAGGTAATTG
AACTTGAATCGGAAACAACAAATAAATATATTTACCCTCTTGTAAAAGCTGTACAGGAAGGACC
TGGAGGTGGCCGTGGACCAGTGTTTGTGGACAGAGGTGGATTAAGACCCAGCTATCAGGCAAAT
GATGTTACTGGAGTCCAGCTCCCTTTTTATAACTCTCAGGGACCAAAATATAATTTTCAAAAGT
CAAAGAGAAGGCTAGGTTTTACATGGTAGAAAAAAATTATTTTTAACATTGAGAAGACTAAGTT
GTAGCATATATGAGCTTCAAATATAAATGGATTTCTGTTAATAAAGCTGTTCTTCATCTAAGTA

hide sequence

RefSeq Acc Id:

XM_034954454 ⟹ XP_034810345

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	13	72,303,928 - 72,344,097 (-)	NCBI
NHGRI_mPanPan1	2B	72,318,886 - 72,359,070 (-)	NCBI
Mhudiblu_PPA_v0	2B	56,915,574 - 56,955,728 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003824343	(Get FASTA)	NCBI Sequence Viewer
	XP_034810345	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000035750.1

RefSeq Acc Id:	XP_003824343 ⟸ XM_003824295
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9CBL4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTSSEMLVRFGRRCGRAKESTEIRNSEEDQVLYLPLLPNKVDLQQVTIIPHNEWKRIQDSLDR LTREAACLRAERKAKKEMHLRSQEVVKHWTNTYAGMKEQKLEAKKKRDEEIEAERQILDLEEEI YKQGKRKKAIENAKQYQFYQTERVKNFHSGLLLSRVMKERDAQIEFRKSKIKSDKKWEEQLKLN IEKAFKEEQEKAEKRHRERVALAEDHLKQIKEHEEEEERRKKHEEKDAEEIKRQNALYEIEMRK KLEKRREEMHESRRRFLEHMQDKHIIKAVEQQQQEEEDEKMRKFIKAKKRLIQMGKEKEAETHR LMEKRRERIHNFLSELLKEKLDNEDMIIARDIAEAEAEWEKEKEKRXKNKAELKTIAEYRAIVM KNKEEEERKRKIEAKEQLLAVMKADQIFWEHEKEKKCKADKEHQEVQDAHIQQMAKNKFNAKQA KQAELDYCRLTEALVAEKEKEFQDYAREVIELESETTNKYIYPLVKAVQEGPGGGRGPVFVDRG GLRPSYQANDVTGVQLPFYNSQGPKYNFQKSKRRLGFTW hide sequence

RefSeq Acc Id:	XP_034810345 ⟸ XM_034954454
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9CBL4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000035750 ⟸ ENSPPAT00000058639

Protein Domains

Trichohyalin-plectin-homology

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000040665	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000058639.1	UniProtKB/TrEMBL
InterPro	CCDC173	UniProtKB/TrEMBL
	TPH_dom	UniProtKB/TrEMBL
NCBI Gene	CCDC173	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 173	UniProtKB/TrEMBL
	PTHR28663	UniProtKB/TrEMBL
Pfam	TPH	UniProtKB/TrEMBL
UniProt	A0A2R9CBL4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-08-24	CFAP210	cilia and flagella associated protein 210	CCDC173	coiled-coil domain containing 173	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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