ZNF862 (zinc finger protein 862) - Rat Genome Database

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Gene: ZNF862 (zinc finger protein 862) Pan paniscus
Analyze
Symbol: ZNF862
Name: zinc finger protein 862
RGD ID: 11686289
Description: ENCODES a protein that exhibits protein dimerization activity (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH genetic disease (ortholog); gingival fibromatosis (ortholog); long QT syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,394,805 - 186,423,762 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,405,069 - 38,434,022 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,541,098 - 141,570,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17154,013,489 - 154,042,393 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7154,016,309 - 154,039,291 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ZNF862
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,394,805 - 186,423,762 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,405,069 - 38,434,022 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,541,098 - 141,570,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17154,013,489 - 154,042,393 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7154,016,309 - 154,039,291 (+)Ensemblpanpan1.1panPan2
ZNF862
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,838,375 - 149,867,479 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,838,375 - 149,867,479 (+)EnsemblGRCh38hg38GRCh38
GRCh377149,535,464 - 149,564,568 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,166,442 - 149,195,501 (+)NCBINCBI36Build 36hg18NCBI36
Celera7144,204,724 - 144,233,784 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,610,955 - 143,639,977 (+)NCBIHuRef
CHM1_17149,544,088 - 149,573,147 (+)NCBICHM1_1
T2T-CHM13v2.07151,020,282 - 151,049,591 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,873,528 - 148,902,587 (+)NCBI
Zfp862-ps
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,481,273 - 48,511,766 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,481,271 - 48,511,766 (+)EnsemblGRCm39 Ensembl
GRCm39 Ensembl648,481,308 - 48,509,057 (+)EnsemblGRCm39 Ensembl
GRCm38648,504,339 - 48,534,832 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,504,337 - 48,534,832 (+)EnsemblGRCm38mm10GRCm38
MGSCv37648,454,338 - 48,484,831 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36648,458,558 - 48,464,418 (+)NCBIMGSCv36mm8
MGSCv36648,869,664 - 48,875,524 (+)NCBIMGSCv36mm8
Celera649,008,009 - 49,045,486 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.48NCBI
Zfp862
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,783,833 - 78,812,884 (+)NCBIGRCr8
mRatBN7.2477,452,930 - 77,481,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl477,453,037 - 77,481,995 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0478,136,183 - 78,165,230 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04142,799,898 - 142,828,927 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,590,094 - 76,617,188 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera472,390,446 - 72,419,495 (+)NCBICelera
Cytogenetic Map4q24NCBI
Znf862
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,892,436 - 4,922,827 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,892,147 - 4,924,851 (+)NCBIChiLan1.0ChiLan1.0
ZNF862
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,604,106 - 14,641,952 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1614,604,288 - 14,639,077 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,212,987 - 15,250,640 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,319,185 - 16,356,857 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,363,411 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,699,143 - 14,736,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,280,045 - 15,317,710 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,330,252 - 15,368,376 (+)NCBIUU_Cfam_GSD_1.0
Znf862
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051186,988,297 - 7,020,417 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365275,882,773 - 5,915,319 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365275,883,034 - 5,915,132 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF862
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1855,849,196 - 55,874,157 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11855,842,970 - 55,883,476 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF862
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121118,404,425 - 118,433,456 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21118,404,579 - 118,430,412 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607214,364,086 - 14,393,114 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf862
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248006,170,952 - 6,186,971 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248006,168,965 - 6,193,093 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000060967   ⟹   ENSPPAP00000038064
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7154,016,309 - 154,039,291 (+)Ensembl
RefSeq Acc Id: XM_003815784   ⟹   XP_003815832
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,859 - 186,423,762 (+)NCBI
NHGRI_mPanPan1738,405,122 - 38,434,022 (+)NCBI
Mhudiblu_PPA_v07141,541,150 - 141,570,053 (+)NCBI
PanPan1.17154,013,489 - 154,042,393 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008968796   ⟹   XP_008967044
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,861 - 186,423,762 (+)NCBI
NHGRI_mPanPan1738,405,124 - 38,434,022 (+)NCBI
Mhudiblu_PPA_v07141,541,152 - 141,570,053 (+)NCBI
PanPan1.17154,013,497 - 154,042,393 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034965205   ⟹   XP_034821096
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,859 - 186,423,762 (+)NCBI
NHGRI_mPanPan1738,405,122 - 38,434,022 (+)NCBI
Mhudiblu_PPA_v07141,543,150 - 141,570,053 (+)NCBI
RefSeq Acc Id: XM_034965206   ⟹   XP_034821097
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,805 - 186,423,762 (+)NCBI
NHGRI_mPanPan1738,405,069 - 38,434,022 (+)NCBI
Mhudiblu_PPA_v07141,541,098 - 141,570,053 (+)NCBI
RefSeq Acc Id: XM_063606138   ⟹   XP_063462208
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,858 - 186,423,762 (+)NCBI
RefSeq Acc Id: XR_010112664
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,858 - 186,423,762 (+)NCBI
RefSeq Acc Id: XR_010112665
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,858 - 186,423,762 (+)NCBI
RefSeq Acc Id: XR_010112666
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,858 - 186,423,762 (+)NCBI
RefSeq Acc Id: XR_010112667
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26186,394,859 - 186,423,762 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003815832 (Get FASTA)   NCBI Sequence Viewer  
  XP_008967044 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821096 (Get FASTA)   NCBI Sequence Viewer  
  XP_034821097 (Get FASTA)   NCBI Sequence Viewer  
  XP_063462208 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000038064.1
Reference Protein Sequences
RefSeq Acc Id: XP_003815832   ⟸   XM_003815784
- Peptide Label: isoform X2
- UniProtKB: A0A2R9C8B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008967044   ⟸   XM_008968796
- Peptide Label: isoform X4
- UniProtKB: A0A2R9C8B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034821097   ⟸   XM_034965206
- Peptide Label: isoform X4
- UniProtKB: A0A2R9C8B2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034821096   ⟸   XM_034965205
- Peptide Label: isoform X3
- UniProtKB: A0A2R9C8B2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000038064   ⟸   ENSPPAT00000060967
RefSeq Acc Id: XP_063462208   ⟸   XM_063606138
- Peptide Label: isoform X1
Protein Domains
KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041754 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000060967.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
InterPro HATC_C_dom UniProtKB/TrEMBL
  KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/TrEMBL
  Znf_TTF UniProtKB/TrEMBL
NCBI Gene ZNF862 ENTREZGENE
PANTHER RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 862 UniProtKB/TrEMBL
Pfam Dimer_Tnp_hAT UniProtKB/TrEMBL
  KRAB UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_TTF UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF53098 UniProtKB/TrEMBL
UniProt A0A2R9C8B2 ENTREZGENE, UniProtKB/TrEMBL