ANK3 (ankyrin 3) - Rat Genome Database
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Gene: ANK3 (ankyrin 3) Pan paniscus
Analyze
Symbol: ANK3
Name: ankyrin 3
RGD ID: 11680536
Description: ENCODES a protein that exhibits cadherin binding (ortholog); cytoskeletal protein binding (ortholog); ion channel binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bipolar disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ankyrin-3; LOW QUALITY PROTEIN: ankyrin-3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11058,774,451 - 59,136,990 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1058,790,696 - 59,602,954 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01056,560,589 - 57,269,952 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
ANK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11058,774,451 - 59,136,990 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1058,790,696 - 59,602,954 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01056,560,589 - 57,269,952 (-)NCBIMhudiblu_PPA_v0panPan3
ANK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1060,026,298 - 60,733,490 (-)EnsemblGRCh38hg38GRCh38
GRCh381060,026,298 - 60,733,528 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371061,786,056 - 62,493,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361061,458,165 - 61,819,494 (-)NCBINCBI36hg18NCBI36
Build 341061,458,164 - 61,819,494NCBI
Celera1055,053,717 - 55,415,045 (-)NCBI
Cytogenetic Map10q21.2NCBI
HuRef1055,773,261 - 56,482,641 (-)NCBIHuRef
CHM1_11062,067,860 - 62,775,531 (-)NCBICHM1_1
Ank3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391069,234,608 - 69,863,266 (+)NCBIGRCm39mm39
GRCm39 Ensembl1069,234,603 - 69,863,268 (+)Ensembl
GRCm381069,533,486 - 70,027,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1069,398,773 - 70,027,438 (+)EnsemblGRCm38mm10GRCm38
MGSCv371068,996,456 - 69,490,184 (+)NCBIGRCm37mm9NCBIm37
MGSCv361068,929,206 - 69,420,423 (+)NCBImm8
Celera1070,624,257 - 71,118,490 (+)NCBICelera
Cytogenetic Map10B5.3NCBI
cM Map1036.1NCBI
Ank3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22018,602,267 - 19,225,831 (-)NCBI
Rnor_6.0 Ensembl2020,105,047 - 20,480,623 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02019,948,767 - 20,480,628 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02022,087,201 - 22,609,939 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42019,328,684 - 19,828,196 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12019,342,749 - 19,991,423 (-)NCBI
Celera2019,989,307 - 20,463,938 (-)NCBICelera
Cytogenetic Map20p11NCBI
Ank3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBIChiLan1.0ChiLan1.0
ANK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl412,167,550 - 12,827,037 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1412,166,275 - 12,827,175 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ank3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366142,664,594 - 2,976,174 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11463,416,154 - 63,809,220 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21468,392,391 - 68,782,101 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANK3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1970,549,665 - 71,253,928 (+)NCBI
ChlSab1.1 Ensembl970,893,260 - 71,254,245 (+)Ensembl
Ank3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247913,299,287 - 3,633,631 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003821182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034930623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000057115   ⟹   ENSPPAP00000034234
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,790,696 - 59,602,954 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057122   ⟹   ENSPPAP00000034241
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,790,696 - 59,439,383 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057132   ⟹   ENSPPAP00000034251
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,790,696 - 59,028,518 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057139   ⟹   ENSPPAP00000034258
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,790,696 - 59,027,206 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057141   ⟹   ENSPPAP00000034260
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,790,696 - 58,888,142 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057152   ⟹   ENSPPAP00000034271
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,803,603 - 59,030,828 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057157   ⟹   ENSPPAP00000034276
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,886,418 - 58,886,849 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057172   ⟹   ENSPPAP00000034291
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,886,706 - 58,914,658 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000057177   ⟹   ENSPPAP00000034296
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1058,947,936 - 59,027,206 (-)Ensembl
RefSeq Acc Id: XM_003821182   ⟹   XP_003821230
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11058,774,451 - 59,136,990 (-)NCBI
Mhudiblu_PPA_v01056,560,589 - 56,923,197 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034930608   ⟹   XP_034786499
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,197 (-)NCBI
RefSeq Acc Id: XM_034930609   ⟹   XP_034786500
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 57,269,886 (-)NCBI
RefSeq Acc Id: XM_034930610   ⟹   XP_034786501
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,197 (-)NCBI
RefSeq Acc Id: XM_034930611   ⟹   XP_034786502
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,197 (-)NCBI
RefSeq Acc Id: XM_034930612   ⟹   XP_034786503
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,196 (-)NCBI
RefSeq Acc Id: XM_034930613   ⟹   XP_034786504
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,196 (-)NCBI
RefSeq Acc Id: XM_034930615   ⟹   XP_034786506
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,196 (-)NCBI
RefSeq Acc Id: XM_034930616   ⟹   XP_034786507
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,195 (-)NCBI
RefSeq Acc Id: XM_034930617   ⟹   XP_034786508
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,195 (-)NCBI
RefSeq Acc Id: XM_034930618   ⟹   XP_034786509
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,195 (-)NCBI
RefSeq Acc Id: XM_034930619   ⟹   XP_034786510
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,923,183 (-)NCBI
RefSeq Acc Id: XM_034930620   ⟹   XP_034786511
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 57,106,562 (-)NCBI
RefSeq Acc Id: XM_034930621   ⟹   XP_034786512
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,922,983 (-)NCBI
RefSeq Acc Id: XM_034930622   ⟹   XP_034786513
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 57,269,952 (-)NCBI
RefSeq Acc Id: XM_034930623   ⟹   XP_034786514
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01056,560,589 - 56,674,193 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_003821230   ⟸   XM_003821182
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034786513   ⟸   XM_034930622
- Peptide Label: isoform X15
RefSeq Acc Id: XP_034786500   ⟸   XM_034930609
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034786511   ⟸   XM_034930620
- Peptide Label: isoform X13
RefSeq Acc Id: XP_034786502   ⟸   XM_034930611
- Peptide Label: isoform X5
RefSeq Acc Id: XP_034786501   ⟸   XM_034930610
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034786499   ⟸   XM_034930608
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034786506   ⟸   XM_034930615
- Peptide Label: isoform X8
RefSeq Acc Id: XP_034786503   ⟸   XM_034930612
- Peptide Label: isoform X6
RefSeq Acc Id: XP_034786504   ⟸   XM_034930613
- Peptide Label: isoform X7
RefSeq Acc Id: XP_034786508   ⟸   XM_034930617
- Peptide Label: isoform X10
RefSeq Acc Id: XP_034786507   ⟸   XM_034930616
- Peptide Label: isoform X9
RefSeq Acc Id: XP_034786509   ⟸   XM_034930618
- Peptide Label: isoform X11
RefSeq Acc Id: XP_034786510   ⟸   XM_034930619
- Peptide Label: isoform X12
RefSeq Acc Id: XP_034786512   ⟸   XM_034930621
- Peptide Label: isoform X14
RefSeq Acc Id: XP_034786514   ⟸   XM_034930623
- Peptide Label: isoform X16
RefSeq Acc Id: ENSPPAP00000034276   ⟸   ENSPPAT00000057157
RefSeq Acc Id: ENSPPAP00000034271   ⟸   ENSPPAT00000057152
RefSeq Acc Id: ENSPPAP00000034296   ⟸   ENSPPAT00000057177
RefSeq Acc Id: ENSPPAP00000034291   ⟸   ENSPPAT00000057172
RefSeq Acc Id: ENSPPAP00000034234   ⟸   ENSPPAT00000057115
RefSeq Acc Id: ENSPPAP00000034241   ⟸   ENSPPAT00000057122
RefSeq Acc Id: ENSPPAP00000034258   ⟸   ENSPPAT00000057139
RefSeq Acc Id: ENSPPAP00000034251   ⟸   ENSPPAT00000057132
RefSeq Acc Id: ENSPPAP00000034260   ⟸   ENSPPAT00000057141
Protein Domains
ANK_REP_REGION   Death   ZU5


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039668 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000034234 UniProtKB/TrEMBL
  ENSPPAP00000034241 UniProtKB/TrEMBL
  ENSPPAP00000034251 UniProtKB/TrEMBL
  ENSPPAP00000034258 UniProtKB/TrEMBL
  ENSPPAP00000034260 UniProtKB/TrEMBL
  ENSPPAP00000034271 UniProtKB/TrEMBL
  ENSPPAP00000034276 UniProtKB/TrEMBL
  ENSPPAP00000034291 UniProtKB/TrEMBL
  ENSPPAP00000034296 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000057115 UniProtKB/TrEMBL
  ENSPPAT00000057122 UniProtKB/TrEMBL
  ENSPPAT00000057132 UniProtKB/TrEMBL
  ENSPPAT00000057139 UniProtKB/TrEMBL
  ENSPPAT00000057141 UniProtKB/TrEMBL
  ENSPPAT00000057152 UniProtKB/TrEMBL
  ENSPPAT00000057157 UniProtKB/TrEMBL
  ENSPPAT00000057172 UniProtKB/TrEMBL
  ENSPPAT00000057177 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ank3_Death UniProtKB/TrEMBL
  Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_dom UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Ankyrin_UPA UniProtKB/TrEMBL
  DEATH-like_dom_sf UniProtKB/TrEMBL
  Death_domain UniProtKB/TrEMBL
  ZU5_dom UniProtKB/TrEMBL
NCBI Gene ANK3 ENTREZGENE
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_3 UniProtKB/TrEMBL
  Death UniProtKB/TrEMBL
  UPA_2 UniProtKB/TrEMBL
  ZU5 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  DEATH_DOMAIN UniProtKB/TrEMBL
  ZU5 UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  DEATH UniProtKB/TrEMBL
  ZU5 UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/TrEMBL
  SSF48403 UniProtKB/TrEMBL
UniProt A0A2R9BX47_PANPA UniProtKB/TrEMBL
  A0A2R9BXQ5_PANPA UniProtKB/TrEMBL
  A0A2R9BXR4_PANPA UniProtKB/TrEMBL
  A0A2R9BXS8_PANPA UniProtKB/TrEMBL
  A0A2R9BXU8_PANPA UniProtKB/TrEMBL
  A0A2R9BXW1_PANPA UniProtKB/TrEMBL
  A0A2R9BXW8_PANPA UniProtKB/TrEMBL
  A0A2R9C0I2_PANPA UniProtKB/TrEMBL
  A0A2R9C6S6_PANPA UniProtKB/TrEMBL