F8 (coagulation factor VIII) - Rat Genome Database

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Gene: F8 (coagulation factor VIII) Pan paniscus
Analyze
Symbol: F8
Name: coagulation factor VIII
RGD ID: 11679387
Description: ENCODES a protein that exhibits copper ion binding (inferred); oxidoreductase activity (inferred); signaling receptor activity (inferred); INVOLVED IN blood coagulation, intrinsic pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); autoimmune disease (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X154,815,145 - 155,000,578 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X154,820,124 - 155,004,186 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X144,316,192 - 144,505,773 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X154,156,864 - 154,345,635 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX154,156,873 - 154,341,317 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
F8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X154,815,145 - 155,000,578 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X154,820,124 - 155,004,186 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X144,316,192 - 144,505,773 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X154,156,864 - 154,345,635 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX154,156,873 - 154,341,317 (-)Ensemblpanpan1.1panPan2
F8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X154,835,792 - 155,022,723 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX154,835,788 - 155,026,940 (-)EnsemblGRCh38hg38GRCh38
GRCh37X154,064,067 - 154,250,998 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X153,717,260 - 153,904,192 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X153,627,773 - 153,678,176NCBI
CeleraX154,222,608 - 154,409,733 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX142,607,715 - 142,796,096 (-)NCBIHuRef
CHM1_1X153,975,773 - 154,162,623 (-)NCBICHM1_1
T2T-CHM13v2.0X153,072,193 - 153,259,125 (-)NCBIT2T-CHM13v2.0
F8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X74,213,950 - 74,426,342 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX74,216,321 - 74,426,221 (-)EnsemblGRCm39 Ensembl
GRCm38X75,170,344 - 75,382,738 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX75,172,715 - 75,382,615 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X72,418,054 - 72,625,380 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X71,425,450 - 71,632,761 (-)NCBIMGSCv36mm8
CeleraX66,576,966 - 66,780,957 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX38.17NCBI
F8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr818155,237 - 187,186 (+)NCBIGRCr8
mRatBN7.218140,848 - 172,330 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18140,955 - 171,857 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx18158,788 - 190,293 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.018946,627 - 978,133 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018160,695 - 192,201 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.018367,862 - 399,242 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl18367,862 - 399,242 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.018413,447 - 444,491 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418121,134 - 162,008 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.118121,133 - 162,008 (+)NCBI
Celera18135,235 - 166,779 (+)NCBICelera
Cytogenetic Map18p13NCBI
F8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955594658,523 - 802,865 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955594658,686 - 800,101 (+)NCBIChiLan1.0ChiLan1.0
F8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X122,894,974 - 123,046,343 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX122,885,162 - 123,043,414 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX107,890,270 - 108,036,564 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X126,024,520 - 126,170,925 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX126,011,129 - 126,170,899 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X121,771,228 - 121,918,614 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X124,294,452 - 124,441,038 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X123,987,629 - 124,161,753 (-)NCBIUU_Cfam_GSD_1.0
F8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X119,830,886 - 119,943,339 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936927190,111 - 301,609 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936927189,359 - 301,791 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
F8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX125,229,450 - 125,350,853 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X125,265,330 - 125,350,853 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X143,132,160 - 143,217,828 (+)NCBISscrofa10.2Sscrofa10.2susScr3
F8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X129,090,140 - 129,315,343 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX129,088,611 - 129,312,909 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606567,072,999 - 67,292,423 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
F8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624963252,943 - 424,718 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000043383   ⟹   ENSPPAP00000020588
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX154,156,873 - 154,341,317 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000043386   ⟹   ENSPPAP00000020591
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX154,156,873 - 154,206,802 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000043390   ⟹   ENSPPAP00000020595
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX154,158,672 - 154,185,003 (-)Ensembl
RefSeq Acc Id: XM_003809957   ⟹   XP_003810005
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,815,145 - 155,000,578 (-)NCBI
NHGRI_mPanPan1X154,820,124 - 155,004,186 (-)NCBI
Mhudiblu_PPA_v0X144,316,624 - 144,501,553 (-)NCBI
PanPan1.1X154,156,864 - 154,341,317 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008962334   ⟹   XP_008960582
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,815,145 - 154,865,114 (-)NCBI
NHGRI_mPanPan1X154,820,124 - 154,868,722 (-)NCBI
Mhudiblu_PPA_v0X144,316,192 - 144,366,181 (-)NCBI
PanPan1.1X154,156,864 - 154,206,802 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003810005 (Get FASTA)   NCBI Sequence Viewer  
  XP_008960582 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000020588.1
  ENSPPAP00000020591.1
  ENSPPAP00000020595.1
RefSeq Acc Id: XP_003810005   ⟸   XM_003809957
- Peptide Label: isoform X1
- UniProtKB: A0A2R9ATQ4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960582   ⟸   XM_008962334
- Peptide Label: isoform X2
- UniProtKB: A0A2R9ATE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000020595   ⟸   ENSPPAT00000043390
RefSeq Acc Id: ENSPPAP00000020588   ⟸   ENSPPAT00000043383
RefSeq Acc Id: ENSPPAP00000020591   ⟸   ENSPPAT00000043386
Protein Domains
F5/8 type C


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033513 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000043383.1 UniProtKB/TrEMBL
  ENSPPAT00000043386.1 UniProtKB/TrEMBL
  ENSPPAT00000043390.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.420 UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/TrEMBL
InterPro Cu-oxidase_2 UniProtKB/TrEMBL
  Cu-oxidase_3 UniProtKB/TrEMBL
  Cu_oxidase_CS UniProtKB/TrEMBL
  Cupredoxin UniProtKB/TrEMBL
  FA58C UniProtKB/TrEMBL
  Factor_5/8-like UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/TrEMBL
KEGG Report pps:100992135 UniProtKB/TrEMBL
NCBI Gene F8 ENTREZGENE
PANTHER COAGULATION FACTOR VIII UniProtKB/TrEMBL
  F5/8 TYPE C DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam Cu-oxidase_2 UniProtKB/TrEMBL
  Cu-oxidase_3 UniProtKB/TrEMBL
  F5_F8_type_C UniProtKB/TrEMBL
PIRSF Factors_V_VIII UniProtKB/TrEMBL
PROSITE FA58C_1 UniProtKB/TrEMBL
  FA58C_2 UniProtKB/TrEMBL
  FA58C_3 UniProtKB/TrEMBL
  MULTICOPPER_OXIDASE1 UniProtKB/TrEMBL
SMART FA58C UniProtKB/TrEMBL
Superfamily-SCOP SSF49503 UniProtKB/TrEMBL
  SSF49785 UniProtKB/TrEMBL
UniProt A0A2R9ATE1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9ATQ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AXP1_PANPA UniProtKB/TrEMBL