ZNF483 (zinc finger protein 483) - Rat Genome Database

Name: ZNF483
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ZNF483 (zinc finger protein 483) Pan paniscus

Analyze

Symbol:

ZNF483

Name:

zinc finger protein 483

RGD ID:

11670063

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN cell fate commitment (inferred); cellular developmental process (inferred); negative regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	27,844,361 - 27,897,802 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	27,846,723 - 27,900,164 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	82,662,886 - 82,714,448 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	110,824,701 - 110,875,895 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	110,826,949 - 110,875,507 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell fate commitment (IEA)

cellular developmental process (IEA)

negative regulation of transcription by RNA polymerase II (IEA)

regulation of DNA-templated transcription (IEA)

Cellular Component

cytoplasm (IEA)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

sequence-specific DNA binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ZNF483
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	27,844,361 - 27,897,802 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	27,846,723 - 27,900,164 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	82,662,886 - 82,714,448 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	110,824,701 - 110,875,895 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	110,826,949 - 110,875,507 (+)	Ensembl	panpan1.1		panPan2

ZNF483
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	111,525,179 - 111,578,136 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	111,525,159 - 111,577,844 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	114,287,459 - 114,340,416 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	113,327,260 - 113,379,945 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	84,786,545 - 84,839,198 (+)	NCBI		Celera
Cytogenetic Map	9	q31.3	NCBI
HuRef	9	83,886,547 - 83,938,538 (+)	NCBI		HuRef
CHM1_1	9	114,433,891 - 114,486,596 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	123,696,561 - 123,749,515 (+)	NCBI		T2T-CHM13v2.0

Zkscan16
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	58,943,568 - 58,962,624 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	58,943,628 - 58,958,355 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	58,943,568 - 58,962,624 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	58,943,628 - 58,958,355 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	58,956,500 - 58,971,227 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	58,958,999 - 58,970,778 (+)	NCBI		MGSCv36	mm8
Celera	4	58,856,697 - 58,871,392 (+)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	32.36	NCBI

Zfp483
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	78,558,213 - 78,575,559 (+)	NCBI		GRCr8
mRatBN7.2	5	73,763,201 - 73,780,511 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	73,763,179 - 73,776,223 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	75,664,552 - 75,681,799 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	77,486,169 - 77,503,412 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	77,458,327 - 77,475,570 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	76,090,015 - 76,103,051 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	76,092,287 - 76,102,590 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	80,234,454 - 80,247,490 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	76,990,071 - 77,003,107 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	76,995,183 - 77,008,220 (+)	NCBI
Celera	5	72,586,427 - 72,599,341 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

Znf483
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	15,741,230 - 15,755,061 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	15,741,368 - 15,775,100 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF483
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	66,165,805 - 66,179,794 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	66,166,676 - 66,177,259 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	64,576,593 - 64,590,559 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	67,298,597 - 67,312,558 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	67,298,675 - 67,311,655 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	65,816,513 - 65,833,692 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	65,839,862 - 65,853,565 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	66,529,162 - 66,543,128 (+)	NCBI		UU_Cfam_GSD_1.0

LOC101956379
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	181,483,384 - 181,485,714 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936559	1,770,475 - 1,783,016 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF483
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	252,342,219 - 252,373,375 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	252,342,621 - 252,356,014 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ZNF483
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	28,025,828 - 28,042,018 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	28,025,952 - 28,044,244 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	14,734,313 - 14,759,741 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf483
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	6,055 - 14,917 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	2,472 - 19,700 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003810869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014346235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034967980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034967981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055117253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055117254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055117255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055117256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055117257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	DQ977193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JARIFH020000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000061369 ⟹ ENSPPAP00000038466

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	9	110,826,949 - 110,875,507 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000061378 ⟹ ENSPPAP00000038475

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	9	110,826,949 - 110,842,202 (+)	Ensembl

RefSeq Acc Id:

XM_003810869 ⟹ XP_003810917

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,869,193 - 27,897,802 (-)	NCBI
NHGRI_mPanPan1	9	27,871,555 - 27,900,164 (-)	NCBI
Mhudiblu_PPA_v0	9	82,662,886 - 82,689,265 (+)	NCBI
PanPan1.1	9	110,824,701 - 110,842,777 (+)	NCBI

Sequence:

show sequence

GCAGGCGCAGTGGTCCCCGCAGGCTTGCGCGCGCACTCGCTGCGGGACAAGCTTCTGGAAGCTG
TTTGCGGTGGCGTTGGTGCTGTTTGCGGATGCTGATGCAGTTTCTGCAGGACTGTAAACTGGAT
TCCTGGAACCTTTGATATTCCTGGCTGTGTATGGTGCCTGTTGGTGGACTGTACTGATACTCAA
CTAGAGTGTGAAGGGACTGGATTCCTGCCCCTGAGACACAATGCAAGCTGTAGTGCCCTTGAAC
AAGATGACAGCCATCTCACCAGAACCTCAAACTCTGGCCTCGACTGAACAAAATGAGGTCCCAA
GAGTGGTTACTTCTGGGGAACAAGAAGCTATTTTAAGAGGAAATGCTGCTGATGCAGAGTCTTT
CAGACAGAGGTTTAGGTGGTTTTGTTACTCAGAAGTAGCTGGACCCAGGAAAGCTCTGAGTCAA
CTCTGGGAGCTCTGCAATCAGTGGCTGAGACCAGACATTCACACGAAAGAACAGATTTTAGAGC
TTCTGGTGTTTGAGCAGTTCCTGACCATTTTGCCTGGGGAGATCAGGATTTGGGTAAAGTCACA
ACATCCTGAGAGTAGTGAGGAAGTGGTGACCCTAATAGAAGATTTGACCCAGATGCTTGAAGAA
AAAGAAGATCCAGTCTCTCAAGATTCTACTGTTTCCCAAGAGGAGAACTCAAAAGAGGATAAAA
TGGTCACTGTTTGTCCCAATACTGAGTCCTGTGAATCTATAACATTGAAGGATGTAGCTGTGAC
CTTTTCAAGAGGAGAGTGGAAGAAGCTGGAGCCTTTTCAGAAGGAGCTATATAAGGAGGTGCTA
CTGGAAAACCTCAGGAACCTAGAATTTCTGGACTTTCCAGTTTCAAAATTAGAGTTGATTTCCC
AGCTAAAGTGGGTTGAATTGCCATGGCTGCTGGAAGAAGTCTCAAAAGGCTCCCGACTAGATGA
ATCAGCTTTAGATAAAATAATAGAAAGGTGCCTCAGGGATGATGATCATGGCTTGATGGAAGAA
TCCCAGCAATATTGTGGCAGCTCAGAGGAGGATCACGGTAATCAGGGAAATTCAAAAGGAAGAG
TCGCACAAAACAAAACTCTTGGGAGTGGCAGTAGGGGTAAGAAATTTGACCCAGATAAAAGCCC
CTTTGGACATAATTTCAAAGAAACTTCAGACTTAATTAAACATCTGAGAGTCTACTTGAGGAAG
AAATCTCGGAGGTATAATGAAAGCAAGAAACCCTTCAGTTTTCATTCAGACCTTGTTCTGAACC
GCAAGGAGAAAACCGCCGGAGAAAAGTCACGGAAATCTAATGATGGTGGGAAAGTCCTGAGTCA
CTCTTCAGCTCTTACTGAACATCAGAAACGTCAGAAGATTCATTTGGGGGATAGGTCCCAAAAA
TGCAGTAAGTGTGGGATAATCTTTATTAGAAGATCAACTCTTTCTAGGAGAAAAACCCCTATGT
GTGAGAAATGTCGGAAAGATTCATGTCAAGAAGCAGCCTTAAATAAAGATGAGGGAAATGAGAG
TGGAGAAAAAACTCATAAATGTAGTAAGTGTGGAAAAGCCTTTGGCTATAGCGCCTCACTCACC
AAACATCGGAGAATTCACACTGGAGAAAAACCCTATATGTGTAATGAATGTGGAAAAGCTTTTA
GTGATAGTTCATCGCTCACGCCACATCATAGAACTCATAGTGGAGAGAAACCCTTCAAATGTGA
TGACTGTGGGAAAGGTTTCACCCTAAGTGCTCACCTCATTAAACATCAGAGAATTCATACTGGA
GAAAAACCTTATAAATGTAAAGACTGTGGGAGACCCTTTAGTGACAGTTCATCTCTTATTCAAC
ATCAGCGAATTCATACTGGAGAAAAACCCTATACATGTAGCAATTGTGGAAAATCCTTCAGTCA
TAGCTCATCCCTTTCCAAACATCAGAGAATTCATACTGGAGAGAAACCCTATAAATGTGGCGAA
TGTGGAAAAGCCTTTAGGCAGAATTCATGCCTTACCCGGCATCAGAGAATTCACACTGGAGAAA
AACCATATTTGTGTAATGATTGCGGAATGACTTTTAGCCATTTTACGTCTGTGATTTATCATCA
AAGACTTCATTCAGGAGAAAAACCCTACAAATGTAACCAGTGTGAGAAAGCTTTCCCAACCCAT
TCACTGCTAAGTCGTCATCAGAGAATTCATACTGGTGTAAAACCTTATAAATGTAAAGAATGTG
GGAAGTCCTTCAGTCAGAGTTCATCTCTTAATGAGCACCACCGAATTCATACAGGAGAGAAACC
CTATGAGTGTAACTATTGTGGTGCAACCTTTAGTCGAAGCTCAATCCTTGTAGAACACCTAAAA
ATTCATACCGGAAGGAGAGAATATGAATGTAACGAATGTGAGAAGACATTTAAAAGTAATTCAG
GCCTCATTAGACATCGGGGATTTCACTCTGCAGAGTAATCCTGGAACTACATTAAAGTGGGGGG
AATTTAATTCAAATTGTCAGTTACTGAAACCCTGGGATGTAAACTTACAGTATTGATCAGTAGC
TGCAGCTTTCGTAAATTGGCAGTTAGGAAAAATATTCTTTTGCCCATTCATCCCTCTTCTTTTC
AAGGATGGCAACGACTGGTAAACAGTAATTAGTTGGTAAAGTCACTGGAAAGGGAAGAATGCAA
AATGATTCTGAGGCCAGACGAATTGGAAAAGCTCTTTTCTTCAGGGGATTTCTCTCTGATTTCT
TCCACTACCATGTAGTGTGATGGAGAGAACTTGACTGCAGTCAGATAACTTGGATTCTGTCCCA
GTTTGCCAACCAACTTGCTGTATACACCTTGGACAAGTCATTTGACCTTTCAGAATTTTATTTT
CGTCACCAGCAGAATGAAGGGATGGGATTAATGATTTTTGCCTTTTTTGGTTTTTTAGTTTTTT
ATTGGTATCCTGATAATCTCTGAAGCTGTGGACATAAGTTATTTTTTTTTATTTGTCATTACTT
TCAAGTTTCTCTAGTAAAAAATACCACTATTCAGGAT

hide sequence

RefSeq Acc Id:

XM_014346235 ⟹ XP_014201721

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,844,361 - 27,897,802 (-)	NCBI
NHGRI_mPanPan1	9	27,846,723 - 27,900,164 (-)	NCBI
Mhudiblu_PPA_v0	9	82,662,886 - 82,714,448 (+)	NCBI
PanPan1.1	9	110,824,701 - 110,875,895 (+)	NCBI

Sequence:

show sequence

GCAGGCGCAGTGGTCCCCGCAGGCTTGCGCGCGCACTCGCTGCGGGACAAGCTTCTGGAAGCTG
TTTGCGGTGGCGTTGGTGCTGTTTGCGGATGCTGATGCAGTTTCTGCAGGACTGTAAACTGGAT
TCCTGGAACCTTTGATATTCCTGGCTGTGTATGGTGCCTGTTGGTGGACTGTACTGATACTCAA
CTAGAGTGTGAAGGGACTGGATTCCTGCCCCTGAGACACAATGCAAGCTGTAGTGCCCTTGAAC
AAGATGACAGCCATCTCACCAGAACCTCAAACTCTGGCCTCGACTGAACAAAATGAGGTCCCAA
GAGTGGTTACTTCTGGGGAACAAGAAGCTATTTTAAGAGGAAATGCTGCTGATGCAGAGTCTTT
CAGACAGAGGTTTAGGTGGTTTTGTTACTCAGAAGTAGCTGGACCCAGGAAAGCTCTGAGTCAA
CTCTGGGAGCTCTGCAATCAGTGGCTGAGACCAGACATTCACACGAAAGAACAGATTTTAGAGC
TTCTGGTGTTTGAGCAGTTCCTGACCATTTTGCCTGGGGAGATCAGGATTTGGGTAAAGTCACA
ACATCCTGAGAGTAGTGAGGAAGTGGTGACCCTAATAGAAGATTTGACCCAGATGCTTGAAGAA
AAAGAAGATCCAGTCTCTCAAGATTCTACTGTTTCCCAAGAGGAGAACTCAAAAGAGGATAAAA
TGGTCACTGTTTGTCCCAATACTGAGTCCTGTGAATCTATAACATTGAAGGATGTAGCTGTGAC
CTTTTCAAGAGGAGAGTGGAAGAAGCTGGAGCCTTTTCAGAAGGAGCTATATAAGGAGGTGCTA
CTGGAAAACCTCAGGAACCTAGAATTTCTGGACTTTCCAGTTTCAAAATTAGAGTTGATTTCCC
AGCTAAAGTGGGTTGAATTGCCATGGCTGCTGGAAGAAGTCTCAAAAGGCTCCCGACTAGACAT
ACATGGAGCAGTAAAAAAGATGCAGATGTTCTCTGAGGCTGAATAAGACCATGCTCTGCCTTCT
TGTTTCAACTGTTACACAGAGATGACCAGAGGATGGGGCCACTGCAGTGCAGTTCAAGAGGCTC
TGGTTCGGGGAAGAGTTGGATGGGGTATGAATCCCAACTCTGGGGGTATTAGCTAGTGGAGTGG
CCATAGGCAAGTTACTTAACACTTCTTAACCTCCCTTTGTCTTTCATAAAATAAAAGCTACTAG
GATGAGTTGTTTTAAGGATTTCAGATTATAGTCTATGTGAGATATGTGCAAACATGTACATATT
TCCCCTAGAAGCAATGGTTTTCAGCCTTGGTGGTGACCTTATAGAACATAAATATTGCGAATAA
TGAAAATCCACTGAATCTAATAAGGGACTTGTATCGGTAAGATGTAAAGA

hide sequence

RefSeq Acc Id:

XM_034967980 ⟹ XP_034823871

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,869,193 - 27,897,791 (-)	NCBI
NHGRI_mPanPan1	9	27,871,555 - 27,900,153 (-)	NCBI
Mhudiblu_PPA_v0	9	82,662,886 - 82,689,265 (+)	NCBI

RefSeq Acc Id:

XM_034967981 ⟹ XP_034823872

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,881,292 - 27,897,126 (-)	NCBI
NHGRI_mPanPan1	9	27,883,653 - 27,899,490 (-)	NCBI
Mhudiblu_PPA_v0	9	82,662,886 - 82,677,372 (+)	NCBI

RefSeq Acc Id:

XM_055117253 ⟹ XP_054973228

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,869,193 - 27,897,133 (-)	NCBI
NHGRI_mPanPan1	9	27,871,555 - 27,899,495 (-)	NCBI

RefSeq Acc Id:

XM_055117254 ⟹ XP_054973229

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,853,359 - 27,897,802 (-)	NCBI
NHGRI_mPanPan1	9	27,855,398 - 27,900,164 (-)	NCBI

RefSeq Acc Id:

XM_055117255 ⟹ XP_054973230

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,857,025 - 27,897,128 (-)	NCBI
NHGRI_mPanPan1	9	27,855,398 - 27,899,491 (-)	NCBI

RefSeq Acc Id:

XM_055117256 ⟹ XP_054973231

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,845,255 - 27,897,128 (-)	NCBI
NHGRI_mPanPan1	9	27,846,723 - 27,899,491 (-)	NCBI

RefSeq Acc Id:

XM_055117257 ⟹ XP_054973232

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	27,845,255 - 27,897,791 (-)	NCBI
NHGRI_mPanPan1	9	27,846,723 - 27,900,153 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003810917	(Get FASTA)	NCBI Sequence Viewer
	XP_014201721	(Get FASTA)	NCBI Sequence Viewer
	XP_034823871	(Get FASTA)	NCBI Sequence Viewer
	XP_034823872	(Get FASTA)	NCBI Sequence Viewer
	XP_054973228	(Get FASTA)	NCBI Sequence Viewer
	XP_054973229	(Get FASTA)	NCBI Sequence Viewer
	XP_054973230	(Get FASTA)	NCBI Sequence Viewer
	XP_054973231	(Get FASTA)	NCBI Sequence Viewer
	XP_054973232	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABM54229	(Get FASTA)	NCBI Sequence Viewer
	ABM54230	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000038466
	ENSPPAP00000038466.1
	ENSPPAP00000038475.1

RefSeq Acc Id:	XP_014201721 ⟸ XM_014346235
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCYSEVA GPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIE DLTQMLEEKEDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVTFSRGEWKKLEPFQ KELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKGSRLDIHGAVKKMQMFSEA E hide sequence

RefSeq Acc Id:

XP_003810917 ⟸ XM_003810869

- Peptide Label:

isoform X1

- Sequence:

show sequence

MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCYSEVA
GPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIE
DLTQMLEEKEDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVTFSRGEWKKLEPFQ
KELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKGSRLDESALDKIIERCLRD
DDHGLMEESQQYCGSSEEDHGNQGNSKGRVAQNKTLGSGSRGKKFDPDKSPFGHNFKETSDLIK
HLRVYLRKKSRRYNESKKPFSFHSDLVLNRKEKTAGEKSRKSNDGGKVLSHSSALTEHQKRQKI
HLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGEKTHKCSKCGKA
FGYSASLTKHRRIHTGEKPYMCNECGKAFSDSSSLTPHHRTHSGEKPFKCDDCGKGFTLSAHLI
KHQRIHTGEKPYKCKDCGRPFSDSSSLIQHQRIHTGEKPYTCSNCGKSFSHSSSLSKHQRIHTG
EKPYKCGECGKAFRQNSCLTRHQRIHTGEKPYLCNDCGMTFSHFTSVIYHQRLHSGEKPYKCNQ
CEKAFPTHSLLSRHQRIHTGVKPYKCKECGKSFSQSSSLNEHHRIHTGEKPYECNYCGATFSRS
SILVEHLKIHTGRREYECNECEKTFKSNSGLIRHRGFHSAE

hide sequence

RefSeq Acc Id:	XP_034823871 ⟸ XM_034967980
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_034823872 ⟸ XM_034967981
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000038475 ⟸ ENSPPAT00000061378

RefSeq Acc Id:

ENSPPAP00000038466 ⟸ ENSPPAT00000061369

RefSeq Acc Id:	XP_054973232 ⟸ XM_055117257
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054973231 ⟸ XM_055117256
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054973229 ⟸ XM_055117254
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054973230 ⟸ XM_055117255
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054973228 ⟸ XM_055117253
- Peptide Label:	isoform X1

Protein Domains

C2H2-type KRAB SCAN box

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000041938	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000061369.1	UniProtKB/TrEMBL
	ENSPPAT00000061378.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.4020.10	UniProtKB/TrEMBL
	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB	UniProtKB/TrEMBL
	KRAB_dom_sf	UniProtKB/TrEMBL
	PRDM1	UniProtKB/TrEMBL
	SCAN_dom	UniProtKB/TrEMBL
	SCAN_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	ZNF483	ENTREZGENE
PANTHER	IP01015P-RELATED	UniProtKB/TrEMBL
	PROTEIN ZBED8-RELATED	UniProtKB/TrEMBL
	SCAN DOMAIN-CONTAINING PROTEIN SCAND2P-RELATED	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 141-RELATED	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	SCAN	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PIRSF	PRDM1	UniProtKB/TrEMBL
PROSITE	KRAB	UniProtKB/TrEMBL
	SCAN_BOX	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	KRAB	UniProtKB/TrEMBL
	SCAN	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Retrovirus capsid dimerization domain-like	UniProtKB/TrEMBL
	SSF109640	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A2R9C946	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9C947_PANPA	UniProtKB/TrEMBL
	A1YG04_PANPA	UniProtKB/TrEMBL
	A1YG05_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar