Gene: LOC108351425 (uncharacterized LOC108351425) Rattus norvegicus |
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Analyze |
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Symbol: |
LOC108351425 |
Name: |
uncharacterized LOC108351425 |
RGD ID: |
11513165 |
Description: |
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Type: |
ncrna
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RefSeq Status: |
MODEL |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 22,755,957 - 22,771,388 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 20,868,429 - 20,891,059 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 7 | 26,984,524 - 26,996,285 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Celera | 7 | 18,048,301 - 18,060,062 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q13 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
2298550 | Neuinf6 | Neuroinflammation QTL 6 | 3.3 | | nervous system integrity trait (VT:0010566) | spinal cord RT1-B protein level (CMO:0002132) | 7 | 1 | 27829089 | Rat | 7411566 | Bw136 | Body weight QTL 136 | 10.4 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 7 | 1 | 31962314 | Rat | 9590142 | Scort5 | Serum corticosterone level QTL 5 | 24.4 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 7 | 1 | 31962314 | Rat | 724560 | Plsm3 | Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 | | 0.0003 | tibia length (VT:0004357) | tibia length (CMO:0000450) | 7 | 1 | 34000259 | Rat | 2317047 | Wbc4 | White blood cell count QTL 4 | | 0.01 | leukocyte quantity (VT:0000217) | white blood cell count (CMO:0000027) | 7 | 1 | 35342956 | Rat | 61410 | Bw19 | Body weight QTL 19 | 6.2 | 0.001 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 1 | 44782185 | Rat | 631503 | Bp102 | Blood pressure QTL 102 | 1.9 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 7 | 1 | 44822433 | Rat | 1300176 | Hrtrt10 | Heart rate QTL 10 | 3.19 | | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 7 | 664270 | 26029351 | Rat | 634336 | Anxrr17 | Anxiety related response QTL 17 | 3.66 | | locomotor behavior trait (VT:0001392) | number of entries into a discrete space in an experimental apparatus (CMO:0000960) | 7 | 924703 | 115097879 | Rat | 10755438 | Coatc9 | Coat color QTL 9 | | 0 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 7 | 3529280 | 48529280 | Rat | 9590102 | Sffal5 | Serum free fatty acids level QTL 5 | 8.62 | 0.001 | blood free fatty acid amount (VT:0001553) | plasma free fatty acids level (CMO:0000546) | 7 | 5329019 | 50329019 | Rat | 10755440 | Coatc10 | Coat color QTL 10 | | 0 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 7 | 7496499 | 52496499 | Rat | 10059592 | Kidm45 | Kidney mass QTL 45 | 3.95 | 0.025 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 7 | 7573985 | 52573985 | Rat | 2298547 | Neuinf5 | Neuroinflammation QTL 5 | 3.7 | | nervous system integrity trait (VT:0010566) | spinal cord Cd74 protein level (CMO:0002131) | 7 | 9462246 | 58265113 | Rat | 1643004 | Pain2 | Pain QTL 2 | 1 | | mechanical nociception trait (VT:0002734) | self mutilation severity score (CMO:0002145) | 7 | 9462246 | 98011544 | Rat | 1578652 | Bmd15 | Bone mineral density QTL 15 | 5.2 | | femur mineral mass (VT:0010011) | trabecular volumetric bone mineral density (CMO:0001729) | 7 | 9866467 | 60460686 | Rat | 738033 | Anxrr6 | Anxiety related response QTL 6 | 4.1 | | exploratory behavior trait (VT:0010471) | percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) | 7 | 15573889 | 60573889 | Rat | 1582260 | Bw72 | Body weight QTL 72 | 3.2 | 0.0043 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 15795565 | 38073970 | Rat | 1582261 | Bw69 | Body weight QTL 69 | 3.2 | 0.0048 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 15795565 | 38073970 | Rat | 1582262 | Bw75 | Body weight QTL 75 | 3 | 0.0038 | body mass (VT:0001259) | body weight (CMO:0000012) | 7 | 15795565 | 38073970 | Rat | 2317059 | Aia15 | Adjuvant induced arthritis QTL 15 | 2.46 | | joint integrity trait (VT:0010548) | right rear ankle joint diameter (CMO:0002150) | 7 | 17004598 | 62004598 | Rat | 10755451 | Coatc11 | Coat color QTL 11 | | 0 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 7 | 17944357 | 62944357 | Rat | 70207 | Niddm31 | Non-insulin dependent diabetes mellitus QTL 31 | 3.9 | | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 7 | 18169505 | 26029351 | Rat | 61369 | Mcs2 | Mammary carcinoma susceptibility QTL 2 | 3.38 | | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 7 | 19032807 | 35526300 | Rat | 1354637 | Scl30 | Serum cholesterol level QTL 30 | 3.7 | | blood cholesterol amount (VT:0000180) | blood total cholesterol level (CMO:0000051) | 7 | 19654317 | 49753746 | Rat | 1354644 | Spl4 | Serum phospholipid level QTL 4 | 4.9 | | blood phospholipid amount (VT:0006084) | blood phospholipid level (CMO:0001169) | 7 | 19654317 | 49753746 | Rat | 1354639 | Spl5 | Serum phospholipid level QTL 5 | 3.9 | | blood LDL phospholipid amount (VT:0010505) | blood low density lipoprotein phospholipid level (CMO:0001568) | 7 | 19654317 | 52888450 | Rat | 1300132 | Bp182 | Blood pressure QTL 182 | 3.49 | | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 7 | 19654317 | 84928080 | Rat | 2290372 | Gluco33 | Glucose level QTL 33 | 2.71 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 7 | 20555705 | 29891047 | Rat | |
Expression
Sequence
RefSeq Acc Id: |
XR_005486807 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,969 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486809 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,756,017 - 22,771,388 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,891,057 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486810 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,975 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,429 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486812 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,959 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486813 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,975 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486814 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,958 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486815 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,975 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486816 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,957 - 22,767,773 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_005486819 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,967 - 22,770,127 (+) | NCBI | mRatBN7.2 | 7 | 20,868,445 - 20,880,202 (+) | NCBI |
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RefSeq Acc Id: |
XR_010053198 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,968 - 22,767,773 (+) | NCBI |
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RefSeq Acc Id: |
XR_010053199 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,978 - 22,767,773 (+) | NCBI |
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RefSeq Acc Id: |
XR_010053200 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 7 | 22,755,957 - 22,767,773 (+) | NCBI |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2016-08-02 |
LOC108351425 |
uncharacterized LOC108351425 |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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