Rnf112 (ring finger protein 112) - Rat Genome Database

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Gene: Rnf112 (ring finger protein 112) Mus musculus
Analyze
Symbol: Rnf112
Name: ring finger protein 112
RGD ID: 11502
MGI Page MGI
Description: Enables several functions, including GTP binding activity; GTPase activity; and protein self-association. Involved in several processes, including embryonic brain development; protein autoubiquitination; and response to hydroperoxide. Acts upstream of or within G1 to G0 transition involved in cell differentiation; positive regulation of glial cell differentiation; and positive regulation of neuron differentiation. Located in several cellular components, including cytoplasmic vesicle; nuclear body; and postsynaptic density. Is expressed in several structures, including adrenal gland; alimentary system; brain; genitourinary system; and respiratory system. Orthologous to human RNF112 (ring finger protein 112).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI854096; bf; bfp; brain finger protein; neu; neurolastin; R75574; Zfp17; Zfp179; zinc finger protein 179; ZNF179
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,339,243 - 61,345,014 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1161,339,268 - 61,344,957 (-)EnsemblGRCm39 Ensembl
GRCm381161,448,417 - 61,454,188 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,448,442 - 61,454,131 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,261,944 - 61,267,388 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361161,264,637 - 61,270,081 (-)NCBIMGSCv36mm8
MGSCv361161,878,133 - 61,883,577 (-)NCBIMGSCv36mm8
Cytogenetic Map11B2NCBI
cM Map1137.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Chromosome mapping of human (ZNF179), mouse, and rat genes for brain finger protein (bfp), a member of the RING finger family. Matsuda Y, etal., Genomics 1996 Apr 15;33(2):325-7.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9615224   PMID:9806830   PMID:10049592   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12805289   PMID:16141072   PMID:16141073  
PMID:17273973   PMID:18287559   PMID:21124890   PMID:21566658   PMID:21873635   PMID:22988430   PMID:24194600   PMID:24359566   PMID:24788683   PMID:26212327   PMID:26792191   PMID:26951452  
PMID:27918959   PMID:28684796   PMID:30404641   PMID:30454900   PMID:31177092   PMID:31271872   PMID:33333713   PMID:34321999   PMID:38187761  


Genomics

Comparative Map Data
Rnf112
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,339,243 - 61,345,014 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1161,339,268 - 61,344,957 (-)EnsemblGRCm39 Ensembl
GRCm381161,448,417 - 61,454,188 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,448,442 - 61,454,131 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,261,944 - 61,267,388 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361161,264,637 - 61,270,081 (-)NCBIMGSCv36mm8
MGSCv361161,878,133 - 61,883,577 (-)NCBIMGSCv36mm8
Cytogenetic Map11B2NCBI
cM Map1137.96NCBI
RNF112
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381719,411,232 - 19,417,276 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1719,411,125 - 19,417,276 (+)EnsemblGRCh38hg38GRCh38
GRCh371719,314,545 - 19,320,589 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361719,255,116 - 19,261,181 (+)NCBINCBI36Build 36hg18NCBI36
Build 341719,255,229 - 19,261,179NCBI
Celera1716,727,296 - 16,733,394 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1718,694,050 - 18,700,147 (+)NCBIHuRef
CHM1_11719,323,239 - 19,329,336 (+)NCBICHM1_1
T2T-CHM13v2.01719,359,261 - 19,365,304 (+)NCBIT2T-CHM13v2.0
Rnf112
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81046,620,602 - 46,655,745 (-)NCBIGRCr8
mRatBN7.21046,121,146 - 46,126,691 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1046,121,148 - 46,126,699 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1050,824,412 - 50,829,957 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01050,314,931 - 50,320,476 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01045,818,358 - 45,823,903 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01047,719,034 - 47,726,050 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1047,719,014 - 47,725,172 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,491,743 - 47,499,277 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,599,958 - 47,605,503 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11047,613,582 - 47,619,126 (-)NCBI
Celera1045,373,245 - 45,378,798 (-)NCBICelera
Cytogenetic Map10q22NCBI
Rnf112
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955467349,256 - 355,922 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955467349,703 - 355,922 (-)NCBIChiLan1.0ChiLan1.0
RNF112
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21954,420,657 - 54,426,876 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11759,233,074 - 59,239,283 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01731,688,381 - 31,701,675 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11736,860,202 - 36,866,805 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1736,860,202 - 36,894,877 (-)Ensemblpanpan1.1panPan2
RNF112
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1540,792,049 - 40,798,534 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl540,793,107 - 40,806,073 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha540,933,257 - 40,939,715 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0540,899,694 - 40,906,152 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl540,899,694 - 40,913,767 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1540,868,052 - 40,874,510 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0540,814,840 - 40,821,295 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0541,006,920 - 41,013,378 (-)NCBIUU_Cfam_GSD_1.0
Rnf112
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560260,237,949 - 60,243,638 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936881343,604 - 349,848 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936881343,625 - 349,564 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF112
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,117,461 - 60,126,173 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,117,452 - 60,124,071 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RNF112
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,996,532 - 18,002,842 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1617,996,915 - 18,001,716 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660592,848,553 - 2,856,753 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnf112
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248495,699,839 - 5,706,826 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248495,698,937 - 5,706,316 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rnf112
159 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2081
Count of miRNA genes:575
Interacting mature miRNAs:716
Transcripts:ENSMUST00000054927, ENSMUST00000060255, ENSMUST00000102661, ENSMUST00000126859, ENSMUST00000130648, ENSMUST00000136966, ENSMUST00000152137
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5406567063319522Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115408094165103841Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse

Markers in Region
RH125264  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,448,516 - 61,448,597UniSTSGRCm38
MGSCv371161,262,018 - 61,262,099UniSTSGRCm37
Cytogenetic Map11B1.3UniSTS
AI854096  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,448,680 - 61,448,828UniSTSGRCm38
MGSCv371161,262,182 - 61,262,330UniSTSGRCm37
Cytogenetic Map11B1.3UniSTS
Whitehead/MRC_RH11824.02UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001291024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB013097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL604029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE945765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY237309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY599807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ148450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000054927   ⟹   ENSMUSP00000056464
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,339,268 - 61,344,831 (-)Ensembl
GRCm38.p6 Ensembl1161,448,442 - 61,454,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000060255   ⟹   ENSMUSP00000059903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,339,268 - 61,344,831 (-)Ensembl
GRCm38.p6 Ensembl1161,448,442 - 61,454,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000102661   ⟹   ENSMUSP00000099722
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,339,268 - 61,344,932 (-)Ensembl
GRCm38.p6 Ensembl1161,448,442 - 61,454,106 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126859
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,343,089 - 61,344,745 (-)Ensembl
GRCm38.p6 Ensembl1161,452,263 - 61,453,919 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,343,742 - 61,344,759 (-)Ensembl
GRCm38.p6 Ensembl1161,452,916 - 61,453,933 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,343,561 - 61,344,768 (-)Ensembl
GRCm38.p6 Ensembl1161,452,735 - 61,453,942 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152137
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1161,342,871 - 61,344,957 (-)Ensembl
GRCm38.p6 Ensembl1161,452,045 - 61,454,131 (-)Ensembl
RefSeq Acc Id: NM_001291024   ⟹   NP_001277953
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,243 - 61,344,818 (-)NCBI
GRCm381161,448,417 - 61,453,992 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359130   ⟹   NP_001346059
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,268 - 61,344,831 (-)NCBI
GRCm381161,448,442 - 61,454,005 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009548   ⟹   NP_033574
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,243 - 61,344,818 (-)NCBI
GRCm381161,448,417 - 61,453,992 (-)NCBI
MGSCv371161,261,944 - 61,267,388 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533178   ⟹   XP_006533241
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533180   ⟹   XP_006533243
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,014 (-)NCBI
GRCm381161,448,434 - 61,454,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533181   ⟹   XP_006533244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533182   ⟹   XP_006533245
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533183   ⟹   XP_006533246
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533184   ⟹   XP_006533247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533185   ⟹   XP_006533248
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314504   ⟹   XP_017169993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,014 (-)NCBI
GRCm381161,448,434 - 61,454,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314505   ⟹   XP_017169994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245933   ⟹   XP_030101793
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
GRCm381161,448,434 - 61,454,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156635   ⟹   XP_036012528
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,345,013 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156636   ⟹   XP_036012529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,339,260 - 61,344,490 (-)NCBI
Sequence:
RefSeq Acc Id: NP_033574   ⟸   NM_009548
- Peptide Label: isoform 1
- UniProtKB: Q8JZT5 (UniProtKB/Swiss-Prot),   Q5NCN2 (UniProtKB/Swiss-Prot),   Q3TNS6 (UniProtKB/Swiss-Prot),   Q9Z328 (UniProtKB/Swiss-Prot),   Q96DY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533246   ⟸   XM_006533183
- Peptide Label: isoform X7
- UniProtKB: Q96DY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533243   ⟸   XM_006533180
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006533245   ⟸   XM_006533182
- Peptide Label: isoform X5
- UniProtKB: Q8JZT5 (UniProtKB/Swiss-Prot),   Q5NCN2 (UniProtKB/Swiss-Prot),   Q3TNS6 (UniProtKB/Swiss-Prot),   Q9Z328 (UniProtKB/Swiss-Prot),   Q96DY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533241   ⟸   XM_006533178
- Peptide Label: isoform X1
- UniProtKB: Q96DY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533244   ⟸   XM_006533181
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006533248   ⟸   XM_006533185
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006533247   ⟸   XM_006533184
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: NP_001277953   ⟸   NM_001291024
- Peptide Label: isoform 2
- UniProtKB: Q96DY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017169993   ⟸   XM_017314504
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017169994   ⟸   XM_017314505
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_030101793   ⟸   XM_030245933
- Peptide Label: isoform X9
RefSeq Acc Id: NP_001346059   ⟸   NM_001359130
- Peptide Label: isoform 3
RefSeq Acc Id: ENSMUSP00000056464   ⟸   ENSMUST00000054927
RefSeq Acc Id: ENSMUSP00000059903   ⟸   ENSMUST00000060255
RefSeq Acc Id: ENSMUSP00000099722   ⟸   ENSMUST00000102661
RefSeq Acc Id: XP_036012528   ⟸   XM_036156635
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036012529   ⟸   XM_036156636
- Peptide Label: isoform X10
Protein Domains
GB1/RHD3-type G

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96DY5-F1-model_v2 AlphaFold Q96DY5 1-654 view protein structure

Promoters
RGD ID:6821736
Promoter ID:MM_KWN:7774
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000058348,   OTTMUST00000012946,   OTTMUST00000012947,   OTTMUST00000012948,   OTTMUST00000012949,   OTTMUST00000012950,   OTTMUST00000012951,   OTTMUST00000012952
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361161,267,356 - 61,267,856 (-)MPROMDB
RGD ID:8674932
Promoter ID:EPDNEW_M15496
Type:initiation region
Name:Rnf112_1
Description:Mus musculus ring finger protein 112 , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381161,453,935 - 61,453,995EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:106611 AgrOrtholog
Ensembl Genes ENSMUSG00000010086 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000054927 ENTREZGENE
  ENSMUST00000054927.14 UniProtKB/Swiss-Prot
  ENSMUST00000060255 ENTREZGENE
  ENSMUST00000060255.14 UniProtKB/Swiss-Prot
  ENSMUST00000102661 ENTREZGENE
  ENSMUST00000102661.4 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
  3.40.50.300 UniProtKB/Swiss-Prot
InterPro G_GB1_RHD3_dom UniProtKB/Swiss-Prot
  Guanylate-bd_N UniProtKB/Swiss-Prot
  P-loop_NTPase UniProtKB/Swiss-Prot
  Znf_C3HC4_RING-type UniProtKB/Swiss-Prot
  Znf_RING UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report mmu:22671 UniProtKB/Swiss-Prot
MGD MGI:106611 ENTREZGENE
NCBI Gene 22671 ENTREZGENE
PANTHER GUANYLATE BINDING PROTEIN UniProtKB/Swiss-Prot
  RING FINGER PROTEIN 112 UniProtKB/Swiss-Prot
Pfam GBP UniProtKB/Swiss-Prot
  zf-C3HC4 UniProtKB/Swiss-Prot
PhenoGen Rnf112 PhenoGen
PROSITE G_GB1_RHD3 UniProtKB/Swiss-Prot
  ZF_RING_2 UniProtKB/Swiss-Prot
SMART RING UniProtKB/Swiss-Prot
Superfamily-SCOP RING/U-box UniProtKB/Swiss-Prot
  SSF52540 UniProtKB/Swiss-Prot
UniProt Q3TNS6 ENTREZGENE
  Q5NCN2 ENTREZGENE
  Q8JZT5 ENTREZGENE
  Q96DY5 ENTREZGENE
  Q9Z328 ENTREZGENE
  RN112_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TNS6 UniProtKB/Swiss-Prot
  Q5NCN2 UniProtKB/Swiss-Prot
  Q8JZT5 UniProtKB/Swiss-Prot
  Q9Z328 UniProtKB/Swiss-Prot