Tnnt2 (troponin T2, cardiac) - Rat Genome Database

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Gene: Tnnt2 (troponin T2, cardiac) Mus musculus
Analyze
Symbol: Tnnt2
Name: troponin T2, cardiac
RGD ID: 11434
MGI Page MGI
Description: A structural constituent of cytoskeleton. Acts upstream of or within several processes, including cardiac muscle tissue morphogenesis; response to bacterium; and sarcomere organization. Located in sarcomere and sarcoplasm. Part of troponin complex. Is expressed in several structures, including alimentary system; embryo mesenchyme; heart; musculature; and urogenital sinus. Used to study dilated cardiomyopathy 1D. Human ortholog(s) of this gene implicated in intrinsic cardiomyopathy (multiple). Orthologous to human TNNT2 (troponin T2, cardiac type).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cardiac muscle troponin T; cardiac TnT; cTn; cTnT; Tn; Tnt; tnTc; troponin T, cardiac muscle
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391135,763,933 - 135,780,006 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1135,764,092 - 135,779,998 (+)EnsemblGRCm39 Ensembl
GRCm381135,836,315 - 135,852,268 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1135,836,354 - 135,852,260 (+)EnsemblGRCm38mm10GRCm38
MGSCv371137,732,963 - 137,748,838 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361137,652,816 - 137,668,671 (+)NCBIMGSCv36mm8
Celera1138,471,192 - 138,487,068 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map159.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (EXP)
(E)-thiamethoxam  (ISO)
1,2-dimethylhydrazine  (EXP)
1,3-benzothiazole-2-thiol  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-diaminotoluene  (EXP)
3-methyladenine  (ISO)
3-phenylprop-2-enal  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-azacytidine  (ISO)
5-methoxypsoralen  (ISO)
6-propyl-2-thiouracil  (ISO)
7beta-aminocephalosporanic acid  (ISO)
7H-xanthine  (ISO)
8-Br-cAMP  (ISO)
9H-xanthine  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (EXP,ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
ammonium hexachloroplatinate  (ISO)
amphetamine  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cantharidin  (EXP)
carbofuran  (ISO)
carbon nanotube  (EXP)
celastrol  (ISO)
chelerythrine  (EXP)
chloropicrin  (ISO)
choline  (EXP)
Citreoviridin  (EXP,ISO)
cobalt atom  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocin-1  (ISO)
cytarabine  (ISO)
D-glucose  (EXP)
daunorubicin  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (EXP)
disodium selenite  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
Echimidine  (ISO)
ellagic acid  (ISO)
endosulfan  (ISO)
epalrestat  (EXP)
epichlorohydrin  (ISO)
fenvalerate  (ISO)
ferruginol  (ISO)
folic acid  (EXP,ISO)
fonofos  (ISO)
FR900359  (ISO)
fructose  (ISO)
gallic acid  (ISO)
gentamycin  (ISO)
glucose  (EXP)
graphite  (ISO)
Heliotrine  (ISO)
hexamethylene diisocyanate  (ISO)
hydrogen peroxide  (EXP)
Indeno[1,2,3-cd]pyrene  (EXP)
isoprenaline  (ISO)
L-methionine  (EXP)
lutein  (ISO)
maraviroc  (EXP)
Mesaconitine  (ISO)
metaproterenol  (ISO)
methimazole  (ISO)
methoxychlor  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
naringin  (ISO)
nebivolol  (ISO)
nickel subsulfide  (ISO)
nitrofen  (ISO)
orciprenaline  (ISO)
ozone  (EXP)
paracetamol  (ISO)
paraquat  (ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
Pirarubicin  (ISO)
pravastatin  (EXP)
pregnenolone 16alpha-carbonitrile  (ISO)
pyridaben  (EXP)
quercetin  (ISO)
resveratrol  (EXP,ISO)
ribavirin  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
serpentine asbestos  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP)
sulfadimethoxine  (ISO)
sulforaphane  (EXP,ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
terbufos  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (EXP)
thiamethoxam  (ISO)
thiamine(1+) chloride  (EXP,ISO)
thiram  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triclosan  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
zaragozic acid A  (EXP,ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
dilated cardiomyopathy pathway  (IEA)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
hypertrophic cardiomyopathy pathway  (IEA)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Exposure to diesel exhaust particulates induces cardiac dysfunction and remodeling. Bradley JM, etal., J Appl Physiol (1985). 2013 Oct 1;115(7):1099-106. doi: 10.1152/japplphysiol.00343.2013. Epub 2013 Jul 25.
2. Hypertrophic cardiomyopathy: low frequency of mutations in the beta-myosin heavy chain (MYH7) and cardiac troponin T (TNNT2) genes among Spanish patients. Garcia-Castro M, etal., Clin Chem. 2003 Aug;49(8):1279-85.
3. Cardiac troponin T (cTnT) in hemodialysis patients with asymptomatic and symptomatic atherosclerosis. Hojs R, etal., Arch Med Res. 2005 Jul-Aug;36(4):367-71.
4. Novel cardiac troponin T mutation as a cause of familial dilated cardiomyopathy. Li D, etal., Circulation. 2001 Oct 30;104(18):2188-93.
5. Correlation Between Relative Nasopharyngeal Virus RNA Load and Lymphocyte Count Disease Severity in Patients with COVID-19. Liu Y, etal., Viral Immunol. 2020 Apr 10. doi: 10.1089/vim.2020.0062.
6. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
7. MGDs mouse GO annotations MGD data from the GO Consortium
8. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. Infantile restrictive cardiomyopathy resulting from a mutation in the cardiac troponin T gene. Peddy SB, etal., Pediatrics. 2006 May;117(5):1830-3.
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
13. Mouse MP Annotation Import Pipeline RGD automated import pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Mutations in the genes for cardiac troponin T and alpha-tropomyosin in hypertrophic cardiomyopathy. Watkins H, etal., N Engl J Med 1995 Apr 20;332(16):1058-64.
17. Usefulness of rapid quantitative measurement of myoglobin and troponin T in early diagnosis of acute myocardial infarction. Yamamoto M, etal., Circ J. 2004 Jul;68(7):639-44.
Additional References at PubMed
PMID:7575526   PMID:7958896   PMID:8654947   PMID:9637714   PMID:10021346   PMID:10231856   PMID:10349636   PMID:10449439   PMID:10562721   PMID:10594179   PMID:10700454   PMID:10731436  
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PMID:17556660   PMID:17585069   PMID:17766470   PMID:17959729   PMID:18061570   PMID:18256189   PMID:18296493   PMID:18349139   PMID:18448675   PMID:18480752   PMID:18548613   PMID:18554416  
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PMID:20079745   PMID:20130022   PMID:20185768   PMID:20418479   PMID:20453157   PMID:20551314   PMID:20881014   PMID:21267068   PMID:21364285   PMID:21601656   PMID:21639091   PMID:21663736  
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PMID:27036851   PMID:27049307   PMID:27106044   PMID:27114035   PMID:27166947   PMID:27266388   PMID:27348591   PMID:27390088   PMID:27439108   PMID:27694478   PMID:27725084   PMID:27752085  
PMID:27766308   PMID:27769999   PMID:27775552   PMID:27936050   PMID:27986432   PMID:27997827   PMID:28067668   PMID:28172500   PMID:28195173   PMID:28287088   PMID:28334964   PMID:28419739  
PMID:28512107   PMID:28580685   PMID:28653618   PMID:28655168   PMID:28698371   PMID:28735292   PMID:28797033   PMID:28834610   PMID:28846746   PMID:28890073   PMID:29021295   PMID:29078393  
PMID:29084269   PMID:29107716   PMID:29131159   PMID:29169900   PMID:29202929   PMID:29371594   PMID:29444209   PMID:29453456   PMID:29478089   PMID:29487191   PMID:29632206   PMID:29653945  
PMID:29654745   PMID:29700121   PMID:29727635   PMID:29791855   PMID:29920846   PMID:29956664   PMID:30087351   PMID:30121012   PMID:30128894   PMID:30297694   PMID:30307112   PMID:30445044  
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PMID:32883967   PMID:32994313   PMID:33397958   PMID:33574455   PMID:33632818   PMID:33665549   PMID:33758249   PMID:33760044   PMID:33822475   PMID:33913477   PMID:33968922   PMID:34052210  
PMID:34079011   PMID:34279605   PMID:34320366   PMID:34368133   PMID:34569705   PMID:34571841   PMID:34599161   PMID:34622152   PMID:34628272   PMID:34646377   PMID:34694145   PMID:34851661  
PMID:34970537   PMID:35082446   PMID:35103284   PMID:35237793   PMID:35364055   PMID:35472321   PMID:35656980   PMID:35817961   PMID:35905011   PMID:35970860   PMID:36057632   PMID:36094016  
PMID:36220812   PMID:36292593   PMID:36318802   PMID:36325906   PMID:36333314   PMID:36413948   PMID:36460641   PMID:36575170   PMID:36649430   PMID:36653444   PMID:36662623   PMID:36706168  
PMID:36736300   PMID:36745292   PMID:36877136   PMID:37002228   PMID:37023750   PMID:37037405   PMID:37037595   PMID:37254794   PMID:37458435   PMID:37468485   PMID:37543677   PMID:37669937  
PMID:37689753   PMID:37727504   PMID:37787076   PMID:37935281   PMID:37972593   PMID:38014633   PMID:38191655   PMID:38226173   PMID:38374152  


Genomics

Comparative Map Data
Tnnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391135,763,933 - 135,780,006 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1135,764,092 - 135,779,998 (+)EnsemblGRCm39 Ensembl
GRCm381135,836,315 - 135,852,268 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1135,836,354 - 135,852,260 (+)EnsemblGRCm38mm10GRCm38
MGSCv371137,732,963 - 137,748,838 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361137,652,816 - 137,668,671 (+)NCBIMGSCv36mm8
Celera1138,471,192 - 138,487,068 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map159.32NCBI
TNNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381201,359,014 - 201,377,680 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1201,359,008 - 201,377,764 (-)EnsemblGRCh38hg38GRCh38
GRCh371201,328,142 - 201,346,808 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361199,594,765 - 199,613,428 (-)NCBINCBI36Build 36hg18NCBI36
Build 341198,059,798 - 198,078,462NCBI
Celera1174,451,992 - 174,470,656 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1172,494,387 - 172,513,074 (-)NCBIHuRef
CHM1_11202,750,309 - 202,768,995 (-)NCBICHM1_1
T2T-CHM13v2.01200,616,823 - 200,635,489 (-)NCBIT2T-CHM13v2.0
Tnnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81349,819,123 - 49,837,125 (+)NCBIGRCr8
mRatBN7.21347,267,325 - 47,285,390 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1347,267,204 - 47,285,388 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1349,880,350 - 49,893,175 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01351,168,415 - 51,181,238 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01348,432,330 - 48,444,960 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01352,662,974 - 52,680,992 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1352,662,996 - 52,680,990 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01357,711,369 - 57,729,182 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41348,872,972 - 48,885,815 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11348,887,014 - 48,899,858 (+)NCBI
Celera1347,589,409 - 47,602,135 (+)NCBICelera
Cytogenetic Map13q13NCBI
Tnnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540637,487,154 - 37,507,639 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540637,491,462 - 37,507,360 (-)NCBIChiLan1.0ChiLan1.0
TNNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2148,009,649 - 48,022,660 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1147,974,336 - 47,987,350 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01176,957,298 - 176,976,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11181,258,314 - 181,277,048 (-)NCBIpanpan1.1PanPan1.1panPan2
TNNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.171,598,306 - 1,620,531 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl71,598,306 - 1,613,741 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha71,565,151 - 1,580,081 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.071,523,217 - 1,537,269 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl71,506,647 - 1,543,842 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.171,510,291 - 1,525,219 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.071,618,096 - 1,633,001 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.071,642,705 - 1,657,644 (+)NCBIUU_Cfam_GSD_1.0
Tnnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934473,817,529 - 73,834,405 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365673,056,845 - 3,068,887 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365673,052,167 - 3,069,077 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1023,749,335 - 23,763,396 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11023,749,528 - 23,759,696 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21028,159,010 - 28,173,145 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TNNT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12528,035,563 - 28,054,322 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2528,040,087 - 28,054,120 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605528,830,239 - 28,851,566 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnnt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248079,336,904 - 9,348,396 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248079,332,202 - 9,348,610 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tnnt2
654 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1183
Count of miRNA genes:159
Interacting mature miRNAs:165
Transcripts:ENSMUST00000027671, ENSMUST00000112085, ENSMUST00000112086, ENSMUST00000112087, ENSMUST00000178204, ENSMUST00000178854, ENSMUST00000179863
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194127725148775742Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1102968534136968667Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109495943143495943Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109638262143638479Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110553179144553298Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110553179144553298Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112131005146131085Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116290836150290937Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118099720152099816Mouse
27226714Metcl1_mmetatarsal-calcaneal length 1, 5 week (mouse)1121727729139727738Mouse
27226740Metcl13_mmetatarsal-calcaneal length 13, 16 week (mouse)1121727729153775746Mouse
27226743Metcl7_mmetatarsal-calcaneal length 7, 10 week (mouse)1121727729153875746Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1122927738156927738Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129130858163130993Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131156308165139464Mouse
14746980Manh50_mmandible shape 50 (mouse)1134131564168131564Mouse
13504831Bacszq1_mbaculum size QTL 1 (mouse)1134331161148128608Mouse

Markers in Region
Tnnt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371137,748,284 - 137,748,640UniSTSGRCm37
Celera1138,486,514 - 138,486,870UniSTS
Cytogenetic Map1E4UniSTS
cM Map160.0UniSTS
43.MMHAP26FRG10.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381135,839,300 - 135,839,474UniSTSGRCm38
MGSCv371137,735,877 - 137,736,051UniSTSGRCm37
Celera1138,474,106 - 138,474,280UniSTS
Cytogenetic Map1E4UniSTS
cM Map160.0UniSTS
Whitehead_YAC1 UniSTS
L47570  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381135,852,167 - 135,852,254UniSTSGRCm38
MGSCv371137,748,744 - 137,748,831UniSTSGRCm37
Celera1138,486,974 - 138,487,061UniSTS
Cytogenetic Map1E4UniSTS
cM Map160.0UniSTS
Whitehead/MRC_RH11930.95UniSTS
Tnnt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381135,851,707 - 135,852,063UniSTSGRCm38
MGSCv371137,748,284 - 137,748,640UniSTSGRCm37
Celera1138,486,514 - 138,486,870UniSTS
Cytogenetic Map1E4UniSTS
Tnnt2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1E4UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001130174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB052890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC162441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ554639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY060272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY064679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY067092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF437386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L46872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000027671   ⟹   ENSMUSP00000027671
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,613 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,875 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112085   ⟹   ENSMUSP00000107715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,613 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,875 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112086   ⟹   ENSMUSP00000107716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,613 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,875 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112087   ⟹   ENSMUSP00000107717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,595 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,857 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178204   ⟹   ENSMUSP00000137579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,124 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,836,386 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178854   ⟹   ENSMUSP00000136265
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,613 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,875 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179863   ⟹   ENSMUSP00000137093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,613 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,840,875 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000186225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,128 - 135,772,490 (+)Ensembl
GRCm38.p6 Ensembl1135,836,390 - 135,844,752 (+)Ensembl
RefSeq Acc Id: ENSMUST00000188028   ⟹   ENSMUSP00000140941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,092 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,836,354 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000188098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,777,188 - 135,777,479 (+)Ensembl
GRCm38.p6 Ensembl1135,849,450 - 135,849,741 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189355   ⟹   ENSMUSP00000139919
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,151 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,836,413 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189732   ⟹   ENSMUSP00000139669
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,148 - 135,779,998 (+)Ensembl
GRCm38.p6 Ensembl1135,836,410 - 135,852,260 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189826   ⟹   ENSMUSP00000140807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,768,437 - 135,777,197 (+)Ensembl
GRCm38.p6 Ensembl1135,840,699 - 135,849,459 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190451   ⟹   ENSMUSP00000140282
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,140 - 135,775,787 (+)Ensembl
GRCm38.p6 Ensembl1135,836,402 - 135,848,049 (+)Ensembl
RefSeq Acc Id: ENSMUST00000191055
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1135,764,128 - 135,767,457 (+)Ensembl
GRCm38.p6 Ensembl1135,836,390 - 135,839,719 (+)Ensembl
RefSeq Acc Id: NM_001130174   ⟹   NP_001123646
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130175   ⟹   NP_001123647
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130176   ⟹   NP_001123648
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,727 - 135,779,999 (+)NCBI
GRCm381135,836,989 - 135,852,261 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130177   ⟹   NP_001123649
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130178   ⟹   NP_001123650
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130179   ⟹   NP_001123651
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130180   ⟹   NP_001123652
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001130181   ⟹   NP_001123653
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011619   ⟹   NP_035749
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,072 - 135,780,006 (+)NCBI
GRCm381135,836,334 - 135,852,268 (+)NCBI
MGSCv371137,732,963 - 137,748,838 (+)RGD
Celera1138,471,140 - 138,487,075 (+)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529383   ⟹   XP_006529446
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,052 - 135,779,999 (+)NCBI
GRCm381135,836,315 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529385   ⟹   XP_006529448
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,052 - 135,779,999 (+)NCBI
GRCm381135,836,315 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529388   ⟹   XP_006529451
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,053 - 135,779,999 (+)NCBI
GRCm381135,836,315 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529390   ⟹   XP_006529453
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,053 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529391   ⟹   XP_006529454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,763,933 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529392   ⟹   XP_006529455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,053 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529393   ⟹   XP_006529456
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,763,933 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529394   ⟹   XP_006529457
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,053 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529395   ⟹   XP_006529458
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391135,764,054 - 135,779,999 (+)NCBI
GRCm381135,836,316 - 135,852,261 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001123646 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123647 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123648 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123649 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123650 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123651 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123652 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123653 (Get FASTA)   NCBI Sequence Viewer  
  NP_035749 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529446 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529448 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529451 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529453 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529454 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529455 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529456 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529457 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529458 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA85345 (Get FASTA)   NCBI Sequence Viewer  
  AAA85346 (Get FASTA)   NCBI Sequence Viewer  
  AAA85347 (Get FASTA)   NCBI Sequence Viewer  
  AAA85348 (Get FASTA)   NCBI Sequence Viewer  
  AAA85349 (Get FASTA)   NCBI Sequence Viewer  
  AAA85350 (Get FASTA)   NCBI Sequence Viewer  
  AAA85351 (Get FASTA)   NCBI Sequence Viewer  
  AAA85352 (Get FASTA)   NCBI Sequence Viewer  
  AAH63753 (Get FASTA)   NCBI Sequence Viewer  
  BAB19881 (Get FASTA)   NCBI Sequence Viewer  
  BAE27554 (Get FASTA)   NCBI Sequence Viewer  
  BAE37494 (Get FASTA)   NCBI Sequence Viewer  
  BAE40318 (Get FASTA)   NCBI Sequence Viewer  
  EDL39562 (Get FASTA)   NCBI Sequence Viewer  
  EDL39563 (Get FASTA)   NCBI Sequence Viewer  
  EDL39564 (Get FASTA)   NCBI Sequence Viewer  
  EDL39565 (Get FASTA)   NCBI Sequence Viewer  
  EDL39566 (Get FASTA)   NCBI Sequence Viewer  
  EDL39567 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000027671.6
  ENSMUSP00000107717
  ENSMUSP00000107717.3
  ENSMUSP00000136265.2
  ENSMUSP00000137093.2
  ENSMUSP00000139669
  ENSMUSP00000139669.2
  ENSMUSP00000139919
  ENSMUSP00000139919.2
  ENSMUSP00000140282.2
  ENSMUSP00000140807.2
  ENSMUSP00000140941
  ENSMUSP00000140941.2
GenBank Protein P50752 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_035749   ⟸   NM_011619
- Peptide Label: isoform f
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123646   ⟸   NM_001130174
- Peptide Label: isoform a
- UniProtKB: Q6P3Z7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123647   ⟸   NM_001130175
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001123649   ⟸   NM_001130177
- Peptide Label: isoform c
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123650   ⟸   NM_001130178
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001123651   ⟸   NM_001130179
- Peptide Label: isoform h
- Sequence:
RefSeq Acc Id: NP_001123652   ⟸   NM_001130180
- Peptide Label: isoform e
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123653   ⟸   NM_001130181
- Peptide Label: isoform i
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123648   ⟸   NM_001130176
- Peptide Label: isoform b
- UniProtKB: Q64360 (UniProtKB/Swiss-Prot),   Q64377 (UniProtKB/Swiss-Prot),   P50752 (UniProtKB/Swiss-Prot),   Q54AB6 (UniProtKB/TrEMBL),   Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529446   ⟸   XM_006529383
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006529448   ⟸   XM_006529385
- Peptide Label: isoform X2
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529451   ⟸   XM_006529388
- Peptide Label: isoform X3
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529453   ⟸   XM_006529390
- Peptide Label: isoform X4
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529454   ⟸   XM_006529391
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006529456   ⟸   XM_006529393
- Peptide Label: isoform X6
- UniProtKB: Q64360 (UniProtKB/Swiss-Prot),   Q64377 (UniProtKB/Swiss-Prot),   P50752 (UniProtKB/Swiss-Prot),   Q54AB6 (UniProtKB/TrEMBL),   Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529455   ⟸   XM_006529392
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006529457   ⟸   XM_006529394
- Peptide Label: isoform X6
- UniProtKB: Q64360 (UniProtKB/Swiss-Prot),   Q64377 (UniProtKB/Swiss-Prot),   P50752 (UniProtKB/Swiss-Prot),   Q54AB6 (UniProtKB/TrEMBL),   Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529458   ⟸   XM_006529395
- Peptide Label: isoform X7
- UniProtKB: Q3TH80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000027671   ⟸   ENSMUST00000027671
RefSeq Acc Id: ENSMUSP00000137579   ⟸   ENSMUST00000178204
RefSeq Acc Id: ENSMUSP00000136265   ⟸   ENSMUST00000178854
RefSeq Acc Id: ENSMUSP00000107716   ⟸   ENSMUST00000112086
RefSeq Acc Id: ENSMUSP00000107715   ⟸   ENSMUST00000112085
RefSeq Acc Id: ENSMUSP00000107717   ⟸   ENSMUST00000112087
RefSeq Acc Id: ENSMUSP00000137093   ⟸   ENSMUST00000179863
RefSeq Acc Id: ENSMUSP00000140282   ⟸   ENSMUST00000190451
RefSeq Acc Id: ENSMUSP00000140941   ⟸   ENSMUST00000188028
RefSeq Acc Id: ENSMUSP00000139669   ⟸   ENSMUST00000189732
RefSeq Acc Id: ENSMUSP00000140807   ⟸   ENSMUST00000189826
RefSeq Acc Id: ENSMUSP00000139919   ⟸   ENSMUST00000189355

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P50752-F1-model_v2 AlphaFold P50752 1-301 view protein structure

Promoters
RGD ID:6875084
Promoter ID:EPDNEW_M993
Type:initiation region
Name:Tnnt2_1
Description:Mus musculus troponin T2, cardiac , transcript variant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M994  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381135,836,390 - 135,836,450EPDNEW
RGD ID:6875086
Promoter ID:EPDNEW_M994
Type:multiple initiation site
Name:Tnnt2_2
Description:Mus musculus troponin T2, cardiac , transcript variant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M993  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381135,845,407 - 135,845,467EPDNEW
RGD ID:6818615
Promoter ID:MM_KWN:2222
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Spleen
Transcripts:NM_001130174,   NM_001130175,   NM_001130177,   NM_001130178,   NM_001130179,   NM_001130180,   NM_001130181,   NM_011619,   UC007CTU.1,   UC007CTV.1,   UC007CTW.1,   UC007CTY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361137,732,106 - 137,732,832 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104597 AgrOrtholog
Ensembl Genes ENSMUSG00000026414 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027671.12 UniProtKB/Swiss-Prot
  ENSMUST00000112087 ENTREZGENE
  ENSMUST00000112087.9 UniProtKB/Swiss-Prot
  ENSMUST00000178854.8 UniProtKB/Swiss-Prot
  ENSMUST00000179863.8 UniProtKB/TrEMBL
  ENSMUST00000188028 ENTREZGENE
  ENSMUST00000188028.7 UniProtKB/TrEMBL
  ENSMUST00000189355 ENTREZGENE
  ENSMUST00000189355.7 UniProtKB/Swiss-Prot
  ENSMUST00000189732 ENTREZGENE
  ENSMUST00000189732.7 UniProtKB/Swiss-Prot
  ENSMUST00000189826.7 UniProtKB/TrEMBL
  ENSMUST00000190451.7 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro TNNT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Troponin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Troponin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:21956 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:104597 ENTREZGENE
NCBI Gene 21956 ENTREZGENE
PANTHER PTHR11521 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TROPONIN T, CARDIAC MUSCLE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Troponin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tnnt2 PhenoGen
Superfamily-SCOP SSF90250 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WQP1_MOUSE UniProtKB/TrEMBL
  A0A087WRX3_MOUSE UniProtKB/TrEMBL
  P50752 ENTREZGENE
  Q3TH80 ENTREZGENE, UniProtKB/TrEMBL
  Q3TQ90_MOUSE UniProtKB/TrEMBL
  Q54AB6 ENTREZGENE, UniProtKB/TrEMBL
  Q64360 ENTREZGENE
  Q64377 ENTREZGENE
  Q6P3Z7 ENTREZGENE, UniProtKB/TrEMBL
  TNNT2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q64360 UniProtKB/Swiss-Prot
  Q64377 UniProtKB/Swiss-Prot