Rpl31l14 (ribosomal protein L31 like 14) - Rat Genome Database

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Gene: Rpl31l14 (ribosomal protein L31 like 14) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Rpl31l14 (Ensembl: LOC108350671)
Name: ribosomal protein L31 like 14 (Ensembl:60S ribosomal protein L31 pseudogene)
RGD ID: 11431277
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L31 pseudogene; 60S ribosomal protein L31-like; large ribosomal subunit protein eL31-like; LOC108350671; ribosomal protein L31 like 5; Rpl31l5
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8435,269,044 - 35,277,346 (+)NCBIGRCr8
mRatBN7.2434,302,562 - 34,310,161 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl434,309,777 - 34,310,151 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0431,704,275 - 31,705,138 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera429,833,243 - 29,834,106 (+)NCBICelera
Cytogenetic Map4q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics

Variants

.
Variants in Rpl31l14
49 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4139505420Rat
634323Hc2Hypercalciuria QTL 22.15urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)421079645210796Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829465958103Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521917856647776Rat
631209Bw2Body weight QTL24.2retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)4994088544463908Rat
1300141Bp178Blood pressure QTL 178arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)41002490139524530Rat
6478724Anxrr35Anxiety related response QTL 350.00449defecation behavior trait (VT:0010462)defecation measurement (CMO:0000997)41008408955084089Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41008408955084089Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41008408955084089Rat
8694374Bw155Body weight QTL 1553.390.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)41008408955084089Rat
9590304Scort17Serum corticosterone level QTL 174.960.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)41008408955084089Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41008408955084089Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41467806559678065Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41793350862933508Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42133334339505420Rat
1354665Stl10Serum triglyceride level QTL 103.57blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42133334344463908Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42133334362278020Rat
8552803Bw144Body weight QTL 14416body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)42271068534430484Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
11530004Niddm71Non-insulin dependent diabetes mellitus QTL 710.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)43258419952754138Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000047850   ⟹   ENSRNOP00000046953
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl434,309,777 - 34,310,151 (+)Ensembl
RefSeq Acc Id: XM_039108602   ⟹   XP_038964530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,269,044 - 35,277,346 (+)NCBI
mRatBN7.2434,302,563 - 34,310,161 (+)NCBI
RefSeq Acc Id: XM_039108603   ⟹   XP_038964531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,275,126 - 35,277,346 (+)NCBI
mRatBN7.2434,309,049 - 34,310,161 (+)NCBI
RefSeq Acc Id: XM_063286822   ⟹   XP_063142892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,269,609 - 35,277,324 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038964530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964531 (Get FASTA)   NCBI Sequence Viewer  
  XP_063142892 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000046953
  ENSRNOP00000046953.2
  ENSRNOP00000049635.1
Reference Protein Sequences
RefSeq Acc Id: XP_038964530   ⟸   XM_039108602
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL),   D3ZU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964531   ⟸   XM_039108603
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL),   D3ZU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000046953   ⟸   ENSRNOT00000047850
RefSeq Acc Id: XP_063142892   ⟸   XM_063286822
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8W1-F1-model_v2 AlphaFold D3Z8W1 1-124 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-45697 BioCyc
Ensembl Genes ENSRNOG00000030296 UniProtKB/TrEMBL
  ENSRNOG00000064781 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042885.2 UniProtKB/TrEMBL
  ENSRNOT00000047850.4 UniProtKB/TrEMBL
Gene3D-CATH 3.10.440.10 UniProtKB/TrEMBL
InterPro Ribosomal_L31e UniProtKB/TrEMBL
  Ribosomal_L31e_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC108350671 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L31 UniProtKB/TrEMBL
  PTHR10956 UniProtKB/TrEMBL
Pfam Ribosomal_L31e UniProtKB/TrEMBL
PhenoGen Rpl31l14 PhenoGen
RatGTEx ENSRNOG00000030296 RatGTEx
  ENSRNOG00000064781 RatGTEx
SMART Ribosomal_L31e UniProtKB/TrEMBL
Superfamily-SCOP SSF54575 UniProtKB/TrEMBL
UniProt D3Z8W1 ENTREZGENE, UniProtKB/TrEMBL
  D3ZU04 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-13 Rpl31l14  ribosomal protein L31 like 14  Rpl31l5  ribosomal protein L31 like 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Rpl31l5  ribosomal protein L31 like 5  LOC108350671  60S ribosomal protein L31 pseudogene  Symbol and Name Changed 1299863 APPROVED
2016-08-02 LOC108350671  60S ribosomal protein L31 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL