LOC108349133 (40S ribosomal protein S2 pseudogene) - Rat Genome Database

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Gene: LOC108349133 (40S ribosomal protein S2 pseudogene) Rattus norvegicus
Analyze
Symbol: LOC108349133
Name: 40S ribosomal protein S2 pseudogene
RGD ID: 11427362
Description:
Type: pseudo
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X72,759,304 - 72,768,328 (+)NCBIGRCr8
mRatBN7.2X68,693,555 - 68,702,580 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X74,546,669 - 74,555,739 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
CeleraX70,058,654 - 70,067,605 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in LOC108349133
20 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2005 BioCyc
NCBI Gene LOC108349133 ENTREZGENE
PhenoGen LOC108349133 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108349133  40S ribosomal protein S2 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL