Slc18a2 (solute carrier family 18 (vesicular monoamine), member 2) - Rat Genome Database

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Gene: Slc18a2 (solute carrier family 18 (vesicular monoamine), member 2) Mus musculus
Analyze
Symbol: Slc18a2
Name: solute carrier family 18 (vesicular monoamine), member 2
RGD ID: 11300
MGI Page MGI
Description: Predicted to enable several functions, including amine transmembrane transporter activity; heat shock protein binding activity; and serotonin:sodium symporter activity. Involved in neurotransmitter loading into synaptic vesicle. Acts upstream of or within several processes, including locomotory behavior; response to amphetamine; and response to toxic substance. Is active in dopaminergic synapse. Is expressed in several structures, including adrenal gland; alimentary system; eye; integumental system; and nervous system. Human ortholog(s) of this gene implicated in Parkinson's disease and type 1 diabetes mellitus. Orthologous to human SLC18A2 (solute carrier family 18 member A2); PARTICIPATES IN dopamine biosynthetic pathway; epinephrine biosynthetic pathway; norepinephrine biosynthetic pathway; INTERACTS WITH (S)-amphetamine; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1110037L13Rik; 9330105E13; MGC90556; monoamine transporter; solute carrier family 18 member 2; synaptic vesicular amine transporter; VAT2; vesicular amine transporter 2; vesicular monoamine transporter 2; Vma; Vmat2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391959,249,310 - 59,284,444 (+)NCBIGRCm39mm39
GRCm39 Ensembl1959,249,328 - 59,284,444 (+)Ensembl
GRCm381959,260,878 - 59,296,012 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1959,260,896 - 59,296,012 (+)EnsemblGRCm38mm10GRCm38
MGSCv371959,335,368 - 59,370,502 (+)NCBIGRCm37mm9NCBIm37
MGSCv361959,314,177 - 59,348,927 (+)NCBImm8
Celera1961,459,915 - 61,496,491 (+)NCBICelera
Cytogenetic Map19D3NCBI
cM Map1954.64NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(R)-noradrenaline  (ISO)
(S)-amphetamine  (EXP,ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
6-propyl-2-thiouracil  (ISO)
9,10-dimethoxy-3-isobutyl-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one  (EXP,ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
aldehydo-D-glucose  (EXP)
alendronic acid  (ISO)
ammonium chloride  (ISO)
amphetamine  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
antimycin A  (ISO)
arsenite(3-)  (EXP)
Asiaticoside  (ISO)
atrazine  (ISO)
b-Dihydrotetrabenazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
chlordecone  (EXP)
chlorpyrifos  (ISO)
choline  (EXP)
clozapine  (ISO)
cocaine  (EXP,ISO)
curcumin  (ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
D-glucose  (EXP)
dabigatran  (ISO)
DDD  (EXP)
DDT  (EXP)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dieldrin  (EXP)
dopamine  (EXP,ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
estrone  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
fucoxanthin  (EXP)
ganglioside GM1  (ISO)
genistein  (EXP)
geraniol  (EXP)
glucose  (EXP)
haloperidol  (ISO)
heptachlor  (EXP)
Heptachlor epoxide  (ISO)
herbicide  (ISO)
histamine  (ISO)
hydroquinone O-beta-D-glucopyranoside  (ISO)
ketoconazole  (EXP)
L-methionine  (EXP)
lead diacetate  (EXP)
leflunomide  (ISO)
maneb  (EXP)
manganese atom  (ISO)
manganese(0)  (ISO)
Mazindol  (ISO)
melatonin  (EXP)
mercury atom  (EXP)
mercury dibromide  (ISO)
mercury(0)  (EXP)
methamphetamine  (EXP,ISO)
methoxychlor  (EXP)
methylphenidate  (EXP,ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
nomifensine  (ISO)
oxaliplatin  (ISO)
oxidopamine  (EXP)
paracetamol  (ISO)
paraquat  (EXP,ISO)
PCB138  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
probenecid  (EXP)
pyrroloquinoline quinone  (ISO)
quinpirole  (EXP)
rabeprazole  (ISO)
raloxifene  (ISO)
reserpine  (EXP,ISO)
rotenone  (ISO)
rottlerin  (EXP)
S-methyl-L-thiocitrulline  (ISO)
SB 431542  (ISO)
SCH 23390  (EXP)
serotonin  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
simazine  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sulpiride  (EXP)
telmisartan  (EXP)
tetrabenazine  (EXP,ISO)
topotecan  (ISO)
tributylstannane  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
valinomycin  (ISO)
valproic acid  (ISO)
vanoxerine dihydrochloride  (ISO)
zinc sulfate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal associative learning  (IAGP)
abnormal catecholamine level  (IAGP)
abnormal circadian behavior  (IAGP)
abnormal corticosterone level  (IAGP)
abnormal dopamine level  (IAGP)
abnormal dopaminergic neuron morphology  (IAGP)
abnormal emotion/affect behavior  (IAGP)
abnormal enzyme/coenzyme activity  (IAGP)
abnormal liquid preference  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal neurotransmitter level  (IAGP)
abnormal neurotransmitter secretion  (IAGP)
abnormal neurotransmitter uptake  (IAGP)
abnormal noradrenaline level  (IAGP)
abnormal response to new environment  (IAGP)
abnormal response to novel odor  (IAGP)
abnormal response to novelty  (IAGP)
abnormal serotonin level  (IAGP)
abnormal sleep pattern  (IAGP)
abnormal synaptic vesicle morphology  (IAGP)
absent gastric milk in neonates  (IAGP)
alpha-synuclein inclusion body  (IAGP)
bradykinesia  (IAGP)
decreased alcohol consumption  (IAGP)
decreased anxiety-related response  (IAGP)
decreased birth body size  (IAGP)
decreased body size  (IAGP)
decreased body temperature  (IAGP)
decreased body weight  (IAGP)
decreased coping response  (IAGP)
decreased dopamine level  (IAGP)
decreased dopaminergic neuron number  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased serotonin level  (IAGP)
decreased vertical activity  (IAGP)
enhanced behavioral response to addictive substance  (IAGP)
enhanced long term potentiation  (IAGP)
hypoactivity  (IAGP)
impaired behavioral response to cocaine  (IAGP)
impaired conditioned place preference behavior  (IAGP)
impaired coordination  (IAGP)
impaired gastric peristalsis  (IAGP)
impaired olfaction  (IAGP)
increased anxiety-related response  (IAGP)
increased defecation amount  (IAGP)
increased susceptibility to dopaminergic neuron neurotoxicity  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
neuron degeneration  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prolonged QT interval  (IAGP)
stereotypic behavior  (IAGP)
References

Additional References at PubMed
PMID:8661734   PMID:8889548   PMID:9303529   PMID:9387858   PMID:9427250   PMID:9427251   PMID:9434961   PMID:9572281   PMID:9826275   PMID:10051314   PMID:10087057   PMID:10349636  
PMID:10357937   PMID:10436056   PMID:10521591   PMID:10618388   PMID:11042159   PMID:11060242   PMID:11076861   PMID:11099463   PMID:11517274   PMID:11793338   PMID:12351197   PMID:12428733  
PMID:12435414   PMID:12477932   PMID:12546819   PMID:12604601   PMID:12655306   PMID:12716422   PMID:12900932   PMID:12915123   PMID:12949782   PMID:14602809   PMID:14610273   PMID:14622207  
PMID:14681479   PMID:14973278   PMID:14973295   PMID:14980210   PMID:15496457   PMID:15820695   PMID:16141072   PMID:16141073   PMID:16396906   PMID:16419078   PMID:16554742   PMID:16602821  
PMID:17100850   PMID:17101029   PMID:17151281   PMID:17287506   PMID:17307644   PMID:17592014   PMID:17652604   PMID:17664021   PMID:17974627   PMID:18006238   PMID:18041582   PMID:18515015  
PMID:18533255   PMID:18643795   PMID:19144721   PMID:19357284   PMID:19515692   PMID:19553450   PMID:19615345   PMID:19780901   PMID:19835933   PMID:20016108   PMID:20610757   PMID:20815037  
PMID:20818386   PMID:21267068   PMID:21677750   PMID:21699982   PMID:21814181   PMID:21873635   PMID:22013016   PMID:22069189   PMID:22483304   PMID:22537018   PMID:22768297   PMID:22889265  
PMID:23106268   PMID:23336056   PMID:23365218   PMID:23404442   PMID:23410751   PMID:23555309   PMID:23591430   PMID:23786406   PMID:23841816   PMID:23978383   PMID:24025942   PMID:24952961  
PMID:24972638   PMID:24979780   PMID:25496994   PMID:25915474   PMID:26297811   PMID:26428905   PMID:26505143   PMID:26542012   PMID:26681446   PMID:26878672   PMID:26879466   PMID:26912775  
PMID:27238716   PMID:27287315   PMID:27693414   PMID:27917116   PMID:28174244   PMID:28219675   PMID:28246328   PMID:28257461   PMID:28560316   PMID:28963508   PMID:30456369   PMID:30578339  
PMID:30635555   PMID:30718509   PMID:30954223   PMID:31097625   PMID:31898856   PMID:32410942   PMID:32826296   PMID:32928885  


Genomics

Comparative Map Data
Slc18a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391959,249,310 - 59,284,444 (+)NCBIGRCm39mm39
GRCm39 Ensembl1959,249,328 - 59,284,444 (+)Ensembl
GRCm381959,260,878 - 59,296,012 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1959,260,896 - 59,296,012 (+)EnsemblGRCm38mm10GRCm38
MGSCv371959,335,368 - 59,370,502 (+)NCBIGRCm37mm9NCBIm37
MGSCv361959,314,177 - 59,348,927 (+)NCBImm8
Celera1961,459,915 - 61,496,491 (+)NCBICelera
Cytogenetic Map19D3NCBI
cM Map1954.64NCBI
SLC18A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl10117,241,093 - 117,279,430 (+)EnsemblGRCh38hg38GRCh38
GRCh3810117,241,114 - 117,279,430 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710119,000,625 - 119,038,941 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610118,990,706 - 119,027,085 (+)NCBINCBI36hg18NCBI36
Build 3410118,991,172 - 119,027,085NCBI
Celera10112,730,694 - 112,769,064 (+)NCBI
Cytogenetic Map10q25.3NCBI
HuRef10112,628,076 - 112,666,635 (+)NCBIHuRef
CHM1_110119,284,792 - 119,323,133 (+)NCBICHM1_1
Slc18a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21258,413,748 - 258,449,143 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1258,413,959 - 258,448,325 (+)Ensembl
Rnor_6.01280,397,831 - 280,457,968 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1280,423,079 - 280,457,148 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01287,782,713 - 287,818,452 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41265,789,917 - 265,824,551 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11266,000,961 - 266,035,596 (+)NCBI
Celera1254,067,617 - 254,102,150 (+)NCBICelera
RH 3.4 Map11709.1RGD
Cytogenetic Map1q55NCBI
Slc18a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543121,949,576 - 21,979,679 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543121,949,553 - 21,979,679 (+)NCBIChiLan1.0ChiLan1.0
SLC18A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.110117,250,639 - 117,290,064 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10117,250,639 - 117,290,064 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v010113,823,005 - 113,862,451 (+)NCBIMhudiblu_PPA_v0panPan3
SLC18A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12827,731,709 - 27,809,341 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2827,731,004 - 27,767,993 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2827,875,180 - 27,989,296 (+)NCBI
ROS_Cfam_1.02828,261,416 - 28,375,583 (+)NCBI
UMICH_Zoey_3.12827,822,412 - 27,937,317 (+)NCBI
UNSW_CanFamBas_1.02827,836,195 - 27,950,801 (+)NCBI
UU_Cfam_GSD_1.02828,030,658 - 28,145,734 (+)NCBI
Slc18a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721318,450,220 - 18,486,469 (-)NCBI
SpeTri2.0NW_0049364867,075,373 - 7,108,984 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC18A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14127,357,555 - 127,396,533 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114127,357,605 - 127,394,242 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214138,758,819 - 138,800,217 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC18A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19110,039,783 - 110,078,822 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl9110,040,391 - 110,076,647 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604871,296,614 - 71,335,781 (+)NCBIVero_WHO_p1.0
Slc18a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473729,356,590 - 29,388,099 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
Slc18a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19D3UniSTS
cM Map1953.0UniSTS
cM Map1953.0UniSTS
AV329468  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381959,296,113 - 59,296,195UniSTSGRCm38
MGSCv371959,370,603 - 59,370,685UniSTSGRCm37
Celera1961,496,592 - 61,496,674UniSTS
Cytogenetic Map19D3UniSTS
cM Map1953.0UniSTS
Whitehead/MRC_RH19638.31UniSTS
AW228944  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381959,297,219 - 59,297,333UniSTSGRCm38
GRCm383149,932,318 - 149,932,429UniSTSGRCm38
MGSCv373149,595,282 - 149,595,393UniSTSGRCm37
MGSCv371959,371,709 - 59,371,823UniSTSGRCm37
Celera1961,497,704 - 61,497,818UniSTS
Celera3156,397,513 - 156,397,624UniSTS
Cytogenetic Map19D3UniSTS
cM Map1953.0UniSTS
Whitehead/MRC_RH19638.26UniSTS
Slc18a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19D3UniSTS
Slc18a2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19D3UniSTS
cM Map1953.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301451Ath16_matherosclerosis 16 (mouse)Not determined192543847859438566Mouse
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192739715561397266Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2815190961431566Mouse
4141562Pas3b_mpulmonary adenoma susceptibility 3b (mouse)Not determined2977296261431566Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193015278561431566Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193015279261431566Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193015279261431566Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193090944161431566Mouse
1301741Lith2_mlithogenic gene 2 (mouse)Not determined193300371961431566Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193396351461431566Mouse
4141019Tgq29_mtriglyceride QTL 29 (mouse)Not determined3460834861431566Mouse
1302170Tanidd1_mtally ho associated non-insulin dependednt diabetes mellitus 1 (mouse)Not determined193676416661431566Mouse
4141650Chldq9_mcholesterol and HDL QTL 9 (mouse)Not determined193789455061431566Mouse
1301466T2dm2_mtype 2 diabetes mellitus 2 (mouse)Not determined193838761861431566Mouse
1302104Lfp1_mlong free running period 1 (mouse)Not determined193919563261431566Mouse
10043896Bw21_mbody weight QTL 21 (mouse)Not determined193960763461431566Mouse
1300585Pgia12_mproteoglycan induced arthritis 12 (mouse)Not determined194259842761431566Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:649
Count of miRNA genes:391
Interacting mature miRNAs:473
Transcripts:ENSMUST00000026084
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000026084   ⟹   ENSMUSP00000026084
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1959,249,328 - 59,284,444 (+)Ensembl
GRCm38.p6 Ensembl1959,260,896 - 59,296,012 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236270
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1959,249,391 - 59,283,675 (+)Ensembl
GRCm38.p6 Ensembl1959,260,959 - 59,295,243 (+)Ensembl
RefSeq Acc Id: NM_172523   ⟹   NP_766111
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391959,249,310 - 59,284,444 (+)NCBI
GRCm381959,260,878 - 59,296,012 (+)NCBI
MGSCv371959,335,368 - 59,370,502 (+)RGD
Celera1961,459,915 - 61,496,491 (+)RGD
cM Map19 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_766111   ⟸   NM_172523
- UniProtKB: Q8BRU6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000026084   ⟸   ENSMUST00000026084
Protein Domains
MFS

Promoters
RGD ID:13679892
Promoter ID:EPDNEW_M24095
Type:multiple initiation site
Name:Slc18a2_1
Description:Mus musculus solute carrier family 18 , member 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381959,260,923 - 59,260,983EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:106677 AgrOrtholog
Ensembl Genes ENSMUSG00000025094 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000026084 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000026084 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Multidrug-R UniProtKB/Swiss-Prot
KEGG Report mmu:214084 UniProtKB/Swiss-Prot
MGD MGI:106677 ENTREZGENE
NCBI Gene 214084 ENTREZGENE
Pfam MFS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB SLC18A2 RGD
PhenoGen Slc18a2 PhenoGen
PROSITE MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs 2_A_01_02 UniProtKB/Swiss-Prot
UniProt Q66L40_MOUSE UniProtKB/TrEMBL
  Q8BRU6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8CC55 UniProtKB/Swiss-Prot