Rrm2 (ribonucleotide reductase M2) - Rat Genome Database

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Gene: Rrm2 (ribonucleotide reductase M2) Mus musculus
Analyze
Symbol: Rrm2
Name: ribonucleotide reductase M2
RGD ID: 11248
MGI Page MGI
Description: Enables ferric iron binding activity; protein homodimerization activity; and ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor. Involved in 2'-deoxyribonucleotide biosynthetic process; protein heterotetramerization; and ribonucleoside diphosphate metabolic process. Acts upstream of or within deoxyribonucleotide metabolic process. Part of ribonucleoside-diphosphate reductase complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; limb; and sensory organ. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RRM2 (ribonucleotide reductase regulatory subunit M2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA407299; MGC113712; R; R2; ribonucleoside-diphosphate reductase M2 chain; ribonucleoside-diphosphate reductase subunit M2; ribonucleotide reductase small chain; ribonucleotide reductase small subunit
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm11485   Gm18384   Gm6593   Rrm2-ps1   Rrm2-ps2   Rrm2-ps3   Rrm2-ps4  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391224,758,253 - 24,764,145 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1224,758,240 - 24,764,145 (+)EnsemblGRCm39 Ensembl
GRCm381224,708,254 - 24,714,146 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1224,708,241 - 24,714,146 (+)EnsemblGRCm38mm10GRCm38
MGSCv371225,393,119 - 25,399,011 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361225,297,362 - 25,303,186 (+)NCBIMGSCv36mm8
Celera1226,164,274 - 26,170,181 (+)NCBICelera
Cytogenetic Map12A1.3NCBI
cM Map128.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,1-dichloroethene  (EXP)
1-chloro-2,4-dinitrobenzene  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2-butoxyethanol  (EXP)
2-palmitoylglycerol  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-hydroxyphenyl retinamide  (EXP)
4-nitroquinoline N-oxide  (EXP)
5-azacytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
8-Br-cAMP  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
amphetamine  (ISO)
antimycin A  (EXP,ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bicalutamide  (ISO)
biphenyl-4-amine  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
buspirone  (ISO)
butanal  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (EXP)
calcitriol  (ISO)
camptothecin  (EXP)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
celastrol  (ISO)
choline  (EXP)
chromium(6+)  (EXP)
chrysene  (EXP)
ciclopirox  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
cyanocob(III)alamin  (EXP)
cycloheximide  (EXP)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
cytarabine  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP,ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (EXP,ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
erythromycin estolate  (ISO)
ethanol  (ISO)
finasteride  (ISO)
fipronil  (ISO)
folic acid  (EXP,ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
gamma-tocopherol  (EXP)
gedunin  (ISO)
gemcitabine  (ISO)
genistein  (ISO)
glycidol  (ISO)
glycine betaine  (EXP,ISO)
hydroxyurea  (EXP)
indole-3-methanol  (ISO)
iron atom  (EXP)
iron dichloride  (ISO)
iron(0)  (EXP)
ivermectin  (ISO)
ketamine  (ISO)
ketoconazole  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
levofloxacin  (ISO)
lidocaine  (ISO)
lipopolysaccharide  (ISO)
lucanthone  (ISO)
LY294002  (EXP)
lycopene  (ISO)
MeIQx  (ISO)
metformin  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methotrexate  (EXP,ISO)
methyl methanesulfonate  (ISO)
methylseleninic acid  (ISO)
miconazole  (EXP)
mifepristone  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-Nitrosopyrrolidine  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
niclosamide  (ISO)
nimesulide  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paclitaxel  (ISO)
palbociclib  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
PhIP  (ISO)
phytoestrogen  (ISO)
picoxystrobin  (ISO)
pinosylvin  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (EXP,ISO)
propanal  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (EXP,ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tebufenpyrad  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP)
tetraphene  (EXP)
thalidomide  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
tocopherol  (EXP)
toluene 2,4-diisocyanate  (EXP)
topotecan  (ISO)
trans-pinosylvin  (ISO)
Tributyltin oxide  (EXP)
triclosan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
triticonazole  (ISO)
troglitazone  (ISO)
trovafloxacin  (EXP,ISO)
Tungsten carbide  (ISO)
tunicamycin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vincaleukoblastine  (ISO)
vincristine  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)
zoledronic acid  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Oncogene amplification in the proximal part of chromosome 6 in rat endometrial adenocarcinoma as revealed by combined BAC/PAC FISH, chromosome painting, zoo-FISH, and allelotyping. Adamovic T, etal., Genes Chromosomes Cancer. 2005 Oct;44(2):139-53.
2. Tumor BRCA1, RRM1 and RRM2 mRNA expression levels and clinical response to first-line gemcitabine plus docetaxel in non-small-cell lung cancer patients. Boukovinas I, etal., PLoS One. 2008;3(11):e3695. doi: 10.1371/journal.pone.0003695. Epub 2008 Nov 11.
3. A novel family of Cys-Cys, His-Cys zinc finger transcription factors expressed in developing nervous system and pituitary gland. Jiang Y, etal., J Biol Chem 1996 May 3;271(18):10723-30.
4. Cross-species comparison of orthologous gene expression in human bladder cancer and carcinogen-induced rodent models. Lu Y, etal., Am J Transl Res. 2010 Sep 20;3(1):8-27.
5. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
6. MGDs mouse GO annotations MGD data from the GO Consortium
7. Cloning of a third mammalian Na+-Ca2+ exchanger, NCX3. Nicoll DA, etal., J Biol Chem 1996 Oct 4;271(40):24914-21.
8. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
11. Gemcitabine-based chemogene therapy for pancreatic cancer using Ad-dCK::UMK GDEPT and TS/RR siRNA strategies. Rejiba S, etal., Neoplasia. 2009 Jul;11(7):637-50.
12. Mouse MP Annotation Import Pipeline RGD automated import pipeline
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Immunohistochemical detection of ribonucleotide reductase in human breast-tumors. Saeki T, etal., Int J Oncol. 1995 Mar;6(3):523-9.
15. Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Warden CH, etal., Genomics 1993 Nov;18(2):295-307.
Additional References at PubMed
PMID:1478665   PMID:2684652   PMID:3025593   PMID:3311968   PMID:7583667   PMID:7671812   PMID:8088780   PMID:8130196   PMID:8612737   PMID:8827514   PMID:8876648   PMID:8889548  
PMID:9021149   PMID:9990288   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11517226   PMID:11687289   PMID:11701955   PMID:11781084   PMID:11840336  
PMID:11854326   PMID:11900481   PMID:12087093   PMID:12477932   PMID:12578384   PMID:12655059   PMID:14610273   PMID:14681479   PMID:14688249   PMID:15322079   PMID:15489334   PMID:15782199  
PMID:15793261   PMID:16141072   PMID:16141073   PMID:16420439   PMID:16829694   PMID:16861739   PMID:16934000   PMID:17065333   PMID:18270576   PMID:18340042   PMID:18616928   PMID:19176520  
PMID:19492792   PMID:19639135   PMID:20724444   PMID:21267068   PMID:21275172   PMID:21677750   PMID:21873635   PMID:22403396   PMID:22922362   PMID:23530224   PMID:23552804   PMID:24194600  
PMID:25838540   PMID:26077802   PMID:26902285   PMID:27266874   PMID:27626380   PMID:28535371   PMID:29445148   PMID:30389914   PMID:31693903   PMID:32434143   PMID:32554809   PMID:33798452  
PMID:35204799   PMID:35414789   PMID:37482342   PMID:38124207   PMID:38286859  


Genomics

Comparative Map Data
Rrm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391224,758,253 - 24,764,145 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1224,758,240 - 24,764,145 (+)EnsemblGRCm39 Ensembl
GRCm381224,708,254 - 24,714,146 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1224,708,241 - 24,714,146 (+)EnsemblGRCm38mm10GRCm38
MGSCv371225,393,119 - 25,399,011 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361225,297,362 - 25,303,186 (+)NCBIMGSCv36mm8
Celera1226,164,274 - 26,170,181 (+)NCBICelera
Cytogenetic Map12A1.3NCBI
cM Map128.5NCBI
RRM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38210,122,568 - 10,211,010 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl210,120,698 - 10,211,725 (+)EnsemblGRCh38hg38GRCh38
GRCh37210,262,695 - 10,351,136 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36210,180,184 - 10,188,074 (+)NCBINCBI36Build 36hg18NCBI36
Build 34210,213,332 - 10,221,220NCBI
Celera210,178,748 - 10,187,595 (+)NCBICelera
Cytogenetic Map2p25.1NCBI
HuRef210,113,982 - 10,122,746 (+)NCBIHuRef
CHM1_1210,192,499 - 10,201,334 (+)NCBICHM1_1
T2T-CHM13v2.0210,151,280 - 10,239,549 (+)NCBIT2T-CHM13v2.0
Rrm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8647,044,755 - 47,075,370 (+)NCBIGRCr8
mRatBN7.2641,339,858 - 41,346,774 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl641,340,557 - 41,346,773 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx641,660,659 - 41,666,878 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0641,975,466 - 41,981,683 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0641,408,612 - 41,414,829 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0643,884,627 - 43,890,818 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl643,884,678 - 43,889,515 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0660,756,160 - 60,762,351 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4642,350,541 - 42,356,748 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera640,627,438 - 40,633,641 (+)NCBICelera
Cytogenetic Map6q16NCBI
Rrm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554875,476,954 - 5,483,049 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554875,477,097 - 5,481,422 (+)NCBIChiLan1.0ChiLan1.0
RRM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212116,388,124 - 116,396,941 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A116,392,095 - 116,400,912 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A10,119,508 - 10,128,318 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A10,275,598 - 10,284,640 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A10,275,598 - 10,284,640 (+)Ensemblpanpan1.1panPan2
RRM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1177,106,515 - 7,113,868 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl177,104,961 - 7,122,939 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha177,033,016 - 7,052,810 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0177,204,147 - 7,223,928 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl177,204,143 - 7,220,570 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1177,095,785 - 7,115,556 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0177,098,343 - 7,118,126 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0177,112,515 - 7,132,291 (+)NCBIUU_Cfam_GSD_1.0
Rrm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629251,592,999 - 51,596,629 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365326,348,041 - 6,390,144 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RRM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3126,347,819 - 126,365,644 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13126,357,198 - 126,367,145 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RRM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11497,512,690 - 97,519,734 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1497,512,832 - 97,521,932 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604514,794,522 - 14,803,100 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rrm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248654,985,620 - 4,990,120 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248654,984,353 - 4,990,187 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rrm2
276 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:539
Count of miRNA genes:424
Interacting mature miRNAs:465
Transcripts:ENSMUST00000020980, ENSMUST00000147789, ENSMUST00000153058, ENSMUST00000154588
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse

Markers in Region
RH124586  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381312,679,784 - 12,679,944UniSTSGRCm38
GRCm381224,712,926 - 24,713,191UniSTSGRCm38
MGSCv371312,772,051 - 12,772,211UniSTSGRCm37
MGSCv371225,397,791 - 25,398,056UniSTSGRCm37
Celera1313,238,959 - 13,239,119UniSTS
Celera1226,168,956 - 26,169,225UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map12A1.3UniSTS
UniSTS:236817  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381224,713,301 - 24,713,525UniSTSGRCm38
MGSCv371225,398,166 - 25,398,390UniSTSGRCm37
Celera1226,169,335 - 26,169,559UniSTS
Cytogenetic Map12A1.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_009104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC140262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF390547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF468116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M14223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X15666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X73581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020980   ⟹   ENSMUSP00000020980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1224,758,240 - 24,764,145 (+)Ensembl
GRCm38.p6 Ensembl1224,708,241 - 24,714,146 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1224,758,555 - 24,759,588 (+)Ensembl
GRCm38.p6 Ensembl1224,708,556 - 24,709,589 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153058   ⟹   ENSMUSP00000120893
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1224,758,751 - 24,761,768 (+)Ensembl
GRCm38.p6 Ensembl1224,708,752 - 24,711,769 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154588   ⟹   ENSMUSP00000119502
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1224,759,028 - 24,763,340 (+)Ensembl
GRCm38.p6 Ensembl1224,709,029 - 24,713,341 (+)Ensembl
RefSeq Acc Id: NM_009104   ⟹   NP_033130
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391224,758,253 - 24,764,145 (+)NCBI
GRCm381224,708,254 - 24,714,146 (+)ENTREZGENE
MGSCv371225,393,119 - 25,399,011 (+)RGD
Celera1226,164,274 - 26,170,181 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_033130   ⟸   NM_009104
- UniProtKB: Q3UI23 (UniProtKB/Swiss-Prot),   Q542E2 (UniProtKB/Swiss-Prot),   P11157 (UniProtKB/Swiss-Prot),   Q3THV8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000020980   ⟸   ENSMUST00000020980
RefSeq Acc Id: ENSMUSP00000119502   ⟸   ENSMUST00000154588
RefSeq Acc Id: ENSMUSP00000120893   ⟸   ENSMUST00000153058

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P11157-F1-model_v2 AlphaFold P11157 1-390 view protein structure

Promoters
RGD ID:8678016
Promoter ID:EPDNEW_M17039
Type:initiation region
Name:Rrm2_1
Description:Mus musculus ribonucleotide reductase M2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381224,708,283 - 24,708,343EPDNEW
RGD ID:6823373
Promoter ID:MM_KWN:11355
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000068102,   OTTMUST00000068103,   OTTMUST00000068104,   OTTMUST00000068105
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361225,392,186 - 25,393,662 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98181 AgrOrtholog
Ensembl Genes ENSMUSG00000020649 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020980 ENTREZGENE
  ENSMUST00000020980.12 UniProtKB/Swiss-Prot
  ENSMUST00000153058.8 UniProtKB/TrEMBL
  ENSMUST00000154588.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.620.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ferritin-like_SF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNR-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNR_small UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNR_small_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNR_small_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20135 UniProtKB/Swiss-Prot
MGD MGI:98181 ENTREZGENE
NCBI Gene 20135 ENTREZGENE
PANTHER PTHR23409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ribonuc_red_sm UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB RRM2 RGD
PhenoGen Rrm2 PhenoGen
PROSITE RIBORED_SMALL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47240 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z0D8_MOUSE UniProtKB/TrEMBL
  F6RUC3_MOUSE UniProtKB/TrEMBL
  P11157 ENTREZGENE
  Q3THV8 ENTREZGENE, UniProtKB/TrEMBL
  Q3UI23 ENTREZGENE
  Q542E2 ENTREZGENE
  RIR2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3UI23 UniProtKB/Swiss-Prot
  Q542E2 UniProtKB/Swiss-Prot