Ppia (peptidylprolyl isomerase A) - Rat Genome Database

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Gene: Ppia (peptidylprolyl isomerase A) Mus musculus
Analyze
Symbol: Ppia
Name: peptidylprolyl isomerase A
RGD ID: 11131
MGI Page MGI
Description: Enables integrin binding activity and peptidyl-prolyl cis-trans isomerase activity. Involved in platelet aggregation. Acts upstream of or within neuron differentiation. Located in extracellular space. Is expressed in several structures, including early conceptus; gonad; hemolymphoid system gland; liver; and skeletal muscle. Human ortholog(s) of this gene implicated in cholangiocarcinoma and human immunodeficiency virus infectious disease. Orthologous to human PPIA (peptidylprolyl isomerase A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2700098C05; Cp; Cphn; Cy; cyclophilin A; cyclosporin A-binding protein; CyP-1; CyP-18; CypA; peptidyl-prolyl cis-trans isomerase A; PPIase A; rotamase A; SP18
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm10123   Gm11469   Gm11700   Gm12071   Gm12632   Gm12728   Gm12842   Gm13400   Gm13454   Gm13493   Gm13679   Gm13750   Gm14046   Gm14485   Gm14534   Gm15621   Gm4824   Gm4828   Gm5199   Gm5238   Gm53055   Gm5497   Gm5558   Gm5711   Gm5777   Gm5791   Gm5826   Gm5876   Gm5883   Gm5967   Gm5973   Gm5981   Gm6043   Gm6044   Gm6045   Gm6050   Gm6052   Gm6056   Gm6060   Gm6061   Gm6062   Gm6063   Gm6064   Gm6065   Gm6066   Gm6067   Gm6068   Gm6069   Gm6070   Gm6071   Gm6072   Gm6073   Gm6074   Gm6075   Gm6076   Gm6077   Gm6078   Gm6079   Gm6080   Gm6081   Gm6082   Gm6702   Ppia-ps1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,365,867 - 6,369,817 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl116,365,443 - 6,369,817 (+)EnsemblGRCm39 Ensembl
GRCm38116,415,867 - 6,419,817 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,415,443 - 6,419,817 (+)EnsemblGRCm38mm10GRCm38
MGSCv37116,315,873 - 6,319,813 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36116,315,873 - 6,319,813 (+)NCBIMGSCv36mm8
Celera116,899,520 - 6,903,460 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(1->4)-beta-D-glucan  (EXP)
(R,R,R)-alpha-tocopherol  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2,2-tetramine  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
alprazolam  (ISO)
ammonium chloride  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
Bandrowski's base  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bleomycin A2  (ISO)
bucladesine  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (EXP)
cumene hydroperoxide  (ISO)
cyclosporin A  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dihydroartemisinin  (ISO)
disulfiram  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
fenvalerate  (ISO)
ferric ammonium citrate  (ISO)
fipronil  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
fumonisin B1  (EXP)
genistein  (ISO)
gentamycin  (ISO)
glyphosate  (EXP)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
indometacin  (ISO)
iodide salt  (ISO)
iron(III) nitrilotriacetate  (ISO)
ivermectin  (ISO)
L-glutamic acid  (ISO)
limonene  (ISO)
lipopolysaccharide  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
medroxyprogesterone acetate  (ISO)
megestrol acetate  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
morphine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-ethyl-N-nitrosourea  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel sulfate  (ISO)
okadaic acid  (ISO)
ozone  (EXP)
paracetamol  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
picoxystrobin  (ISO)
potassium dichromate  (ISO)
Propiverine  (ISO)
quercetin  (ISO)
Rebamipide  (ISO)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP,ISO)
sulfadimethoxine  (ISO)
T-2 toxin  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
torcetrapib  (ISO)
trichostatin A  (ISO)
uranium atom  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Regulatory polymorphisms in the cyclophilin A gene, PPIA, accelerate progression to AIDS. An P, etal., PLoS Pathog. 2007 Jun;3(6):e88. doi: 10.1371/journal.ppat.0030088.
2. Cyclophillin A deficiency accelerates RML-induced prion disease. Bouybayoune I, etal., Neurobiol Dis. 2019 Oct;130:104498. doi: 10.1016/j.nbd.2019.104498. Epub 2019 Jun 8.
3. Concentrations of Serum Cyclophilin A in Patients With Bell Palsy. Demir B, etal., J Craniofac Surg. 2020 Jun;31(4):e368-e370. doi: 10.1097/SCS.0000000000006308.
4. Completion of the entire hepatitis C virus life cycle in genetically humanized mice. Dorner M, etal., Nature. 2013 Sep 12;501(7466):237-41. doi: 10.1038/nature12427. Epub 2013 Jul 31.
5. Evaluation of gingival crevicular fluid cyclophilin a and extracellular matrix metalloproteinase inducer levels in different periodontal diseases. Eren G, etal., Arch Oral Biol. 2016 Aug;68:162-6. doi: 10.1016/j.archoralbio.2016.05.004. Epub 2016 May 4.
6. Clonorchis sinensis cyclophilin A immunization protected mice from CLP-induced sepsis. Jiang J, etal., Int Immunopharmacol. 2018 Jun;59:347-353. doi: 10.1016/j.intimp.2018.03.039. Epub 2018 Apr 19.
7. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
8. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
9. Cyclophilin A protects mice against infection by influenza A virus. Li J, etal., Sci Rep. 2016 Jun 29;6:28978. doi: 10.1038/srep28978.
10. Exosomal cyclophilin A as a novel noninvasive biomarker for Epstein-Barr virus associated nasopharyngeal carcinoma. Liu L, etal., Cancer Med. 2019 Jun;8(6):3142-3151. doi: 10.1002/cam4.2185. Epub 2019 May 7.
11. Cyclophilin A-regulated ubiquitination is critical for RIG-I-mediated antiviral immune responses. Liu W, etal., Elife. 2017 Jun 8;6. doi: 10.7554/eLife.24425.
12. Uncaria rhynchophylla upregulates the expression of MIF and cyclophilin A in kainic acid-induced epilepsy rats: A proteomic analysis. Lo WY, etal., Am J Chin Med. 2010;38(4):745-59.
13. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
14. MGDs mouse GO annotations MGD data from the GO Consortium
15. MGD IEA MGD IEA
16. Cyclophilin A enhances cell proliferation and tumor growth of liver fluke-associated cholangiocarcinoma. Obchoei S, etal., Mol Cancer. 2011 Aug 26;10:102. doi: 10.1186/1476-4598-10-102.
17. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
18. Mouse MP Annotation Import Pipeline RGD automated import pipeline
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Cyclophilin A affects inflammation, virus elimination and myocardial fibrosis in coxsackievirus B3-induced myocarditis. Seizer P, etal., J Mol Cell Cardiol. 2012 Jul;53(1):6-14. doi: 10.1016/j.yjmcc.2012.03.004. Epub 2012 Mar 15.
21. P31, a mammalian housekeeping protein encoded by a multigene family containing a high proportion of pseudogenes. Theodor L, etal., Biochim Biophys Acta 1985 Nov 13;826(2-3):137-46.
Additional References at PubMed
PMID:1497882   PMID:1565646   PMID:1618811   PMID:2197604   PMID:2492638   PMID:2644542   PMID:3558374   PMID:6238408   PMID:6457647   PMID:7588571   PMID:7664883   PMID:8203464  
PMID:9013788   PMID:9149906   PMID:9272636   PMID:9465090   PMID:9501024   PMID:9559670   PMID:10349636   PMID:10545201   PMID:10864470   PMID:10922068   PMID:10964515   PMID:11042159  
PMID:11076861   PMID:12410230   PMID:12477932   PMID:12676565   PMID:12904583   PMID:12907752   PMID:12927782   PMID:14507777   PMID:14610273   PMID:14664809   PMID:15047706   PMID:15111303  
PMID:15130913   PMID:15234001   PMID:15259033   PMID:15308100   PMID:15489334   PMID:15496417   PMID:15648052   PMID:15817462   PMID:15879096   PMID:16141072   PMID:16141073   PMID:16352598  
PMID:16602821   PMID:16978589   PMID:17071620   PMID:17261592   PMID:17366632   PMID:17553872   PMID:17611540   PMID:17634366   PMID:17635954   PMID:17675555   PMID:17768378   PMID:18082675  
PMID:18307411   PMID:18541741   PMID:18718866   PMID:18776938   PMID:18787698   PMID:18799693   PMID:19423573   PMID:19430489   PMID:19758589   PMID:20185768   PMID:20644252   PMID:21057089  
PMID:21173104   PMID:21330604   PMID:21383078   PMID:21441138   PMID:21677750   PMID:21782974   PMID:21824865   PMID:21873635   PMID:22179611   PMID:22566683   PMID:22622580   PMID:22642569  
PMID:22740452   PMID:23201430   PMID:23303713   PMID:23665500   PMID:23846495   PMID:24006456   PMID:24293519   PMID:24429998   PMID:24457600   PMID:24520398   PMID:24668750   PMID:24807872  
PMID:24904115   PMID:25115246   PMID:25119989   PMID:25149188   PMID:25550208   PMID:25678563   PMID:25870110   PMID:26590968   PMID:26932182   PMID:27113764   PMID:27133068   PMID:27507650  
PMID:27825172   PMID:28011744   PMID:28450293   PMID:28663368   PMID:28671696   PMID:28981554   PMID:29382714   PMID:29921611   PMID:29959151   PMID:30196744   PMID:30550785   PMID:30595499  
PMID:30713523   PMID:30949512   PMID:31227743   PMID:31790981   PMID:31926558   PMID:32325033   PMID:32455976   PMID:32554809   PMID:32581705   PMID:32858039   PMID:32931486   PMID:33083747  
PMID:34010655   PMID:34133714   PMID:34611276   PMID:34944106   PMID:34972208   PMID:35103284   PMID:35163387   PMID:35291561   PMID:35294882   PMID:36114006   PMID:36293380   PMID:36417873  
PMID:36656901   PMID:37669129   PMID:38427624  


Genomics

Comparative Map Data
Ppia
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,365,867 - 6,369,817 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl116,365,443 - 6,369,817 (+)EnsemblGRCm39 Ensembl
GRCm38116,415,867 - 6,419,817 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,415,443 - 6,419,817 (+)EnsemblGRCm38mm10GRCm38
MGSCv37116,315,873 - 6,319,813 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36116,315,873 - 6,319,813 (+)NCBIMGSCv36mm8
Celera116,899,520 - 6,903,460 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.97NCBI
PPIA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38744,796,681 - 44,803,117 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl744,796,680 - 44,824,564 (+)EnsemblGRCh38hg38GRCh38
GRCh37744,836,280 - 44,842,716 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36744,802,766 - 44,809,241 (+)NCBINCBI36Build 36hg18NCBI36
Build 34744,609,504 - 44,615,343NCBI
Celera744,935,095 - 44,941,571 (+)NCBICelera
Cytogenetic Map7p13NCBI
HuRef744,721,292 - 44,727,768 (+)NCBIHuRef
CHM1_1744,840,586 - 44,847,069 (+)NCBICHM1_1
T2T-CHM13v2.0744,957,232 - 44,963,670 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2744,875,748 - 44,882,224 (+)NCBI
Ppia
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81485,491,223 - 85,496,884 (+)NCBIGRCr8
mRatBN7.21481,279,292 - 81,282,960 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1481,275,091 - 81,299,601 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1485,680,216 - 85,683,897 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01486,920,016 - 86,923,697 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01483,369,616 - 83,373,297 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01486,673,775 - 86,677,443 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,673,775 - 86,677,443 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01480,306,923 - 80,310,652 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,165,998 - 87,169,995 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11487,185,142 - 87,189,140 (+)NCBI
Celera1480,161,152 - 80,164,810 (+)NCBICelera
Cytogenetic Map14q21NCBI
Ppia
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554567,381,923 - 7,383,203 (-)NCBIChiLan1.0ChiLan1.0
PPIA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2649,708,848 - 49,714,864 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1798,034,551 - 98,039,602 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0745,510,450 - 45,515,448 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1745,578,764 - 45,583,516 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl745,578,765 - 45,605,545 (+)Ensemblpanpan1.1panPan2
LOC403581
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1780,937,433 - 80,938,175 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0781,027,063 - 81,027,805 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1780,741,873 - 80,742,615 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01764,379,529 - 64,380,271 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0781,058,591 - 81,059,333 (-)NCBIUU_Cfam_GSD_1.0
Ppia
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118100,457,966 - 100,461,621 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647819,669,727 - 19,673,355 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPIA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11850,563,130 - 50,566,857 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21855,286,994 - 55,290,557 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPIA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12113,876,099 - 13,883,546 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2113,876,099 - 13,883,462 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660628,652,515 - 8,658,073 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppia
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247407,447,554 - 7,450,641 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247407,447,554 - 7,450,707 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ppia
182 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:379
Count of miRNA genes:245
Interacting mature miRNAs:262
Transcripts:ENSMUST00000090749, ENSMUST00000132846, ENSMUST00000135789, ENSMUST00000137829, ENSMUST00000155824
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse

Markers in Region
RH125522  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19AUniSTS
Cytogenetic Map7F2UniSTS
Cytogenetic Map11A1UniSTS
cM Map111.0UniSTS
Ppia  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37116,316,750 - 6,317,313UniSTSGRCm37
Celera116,900,397 - 6,900,960UniSTS
Cytogenetic Map7F2UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map11A1UniSTS
cM Map111.0UniSTS
Ppi-rs  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19AUniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map7F2UniSTS
cM Map82.0UniSTS
Ppia  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38116,416,747 - 6,417,310UniSTSGRCm38
MGSCv37116,316,750 - 6,317,313UniSTSGRCm37
Celera116,900,397 - 6,900,960UniSTS
Cytogenetic Map11A1UniSTS
cM Map111.0UniSTS
Ppia  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A1UniSTS
Cytogenetic Map7F2UniSTS
Ppia  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map19AUniSTS
Ppia  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A1UniSTS
Cytogenetic Map7F2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF171073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL607152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC087928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ985731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X52803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000090749   ⟹   ENSMUSP00000149662
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,365,870 - 6,369,815 (+)Ensembl
GRCm38.p6 Ensembl116,415,870 - 6,419,815 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132846   ⟹   ENSMUSP00000117987
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,365,443 - 6,369,817 (+)Ensembl
GRCm38.p6 Ensembl116,415,443 - 6,419,817 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,365,868 - 6,368,437 (+)Ensembl
GRCm38.p6 Ensembl116,415,868 - 6,418,437 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,365,876 - 6,369,663 (+)Ensembl
GRCm38.p6 Ensembl116,415,876 - 6,419,663 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,365,876 - 6,369,812 (+)Ensembl
GRCm38.p6 Ensembl116,415,876 - 6,419,812 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213200   ⟹   ENSMUSP00000150020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,366,312 - 6,369,804 (+)Ensembl
GRCm38.p6 Ensembl116,416,312 - 6,419,804 (+)Ensembl
RefSeq Acc Id: NM_008907   ⟹   NP_032933
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,365,867 - 6,369,817 (+)NCBI
GRCm38116,415,867 - 6,419,817 (+)NCBI
MGSCv37116,315,873 - 6,319,813 (+)RGD
Celera116,899,520 - 6,903,460 (+)RGD
cM Map11 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_032933 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD50996 (Get FASTA)   NCBI Sequence Viewer  
  AAH83076 (Get FASTA)   NCBI Sequence Viewer  
  AAH87928 (Get FASTA)   NCBI Sequence Viewer  
  AAH94272 (Get FASTA)   NCBI Sequence Viewer  
  AAH94632 (Get FASTA)   NCBI Sequence Viewer  
  AAH99478 (Get FASTA)   NCBI Sequence Viewer  
  ABL77398 (Get FASTA)   NCBI Sequence Viewer  
  BAB21954 (Get FASTA)   NCBI Sequence Viewer  
  BAB25387 (Get FASTA)   NCBI Sequence Viewer  
  BAB27089 (Get FASTA)   NCBI Sequence Viewer  
  BAB28276 (Get FASTA)   NCBI Sequence Viewer  
  BAB28300 (Get FASTA)   NCBI Sequence Viewer  
  BAB28392 (Get FASTA)   NCBI Sequence Viewer  
  BAC25817 (Get FASTA)   NCBI Sequence Viewer  
  BAE20888 (Get FASTA)   NCBI Sequence Viewer  
  BAE23129 (Get FASTA)   NCBI Sequence Viewer  
  BAE30323 (Get FASTA)   NCBI Sequence Viewer  
  BAE30523 (Get FASTA)   NCBI Sequence Viewer  
  BAE31662 (Get FASTA)   NCBI Sequence Viewer  
  BAE35927 (Get FASTA)   NCBI Sequence Viewer  
  BAE36004 (Get FASTA)   NCBI Sequence Viewer  
  BAE40018 (Get FASTA)   NCBI Sequence Viewer  
  BAE41385 (Get FASTA)   NCBI Sequence Viewer  
  CAA36989 (Get FASTA)   NCBI Sequence Viewer  
  EDL40590 (Get FASTA)   NCBI Sequence Viewer  
  EDL40591 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000117987
  ENSMUSP00000117987.2
  ENSMUSP00000149662.2
  ENSMUSP00000150020.2
GenBank Protein P17742 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_032933   ⟸   NM_008907
- UniProtKB: Q9CWJ5 (UniProtKB/Swiss-Prot),   Q9R137 (UniProtKB/Swiss-Prot),   P17742 (UniProtKB/Swiss-Prot),   Q5SVY2 (UniProtKB/TrEMBL),   Q3TE63 (UniProtKB/TrEMBL),   Q3UAJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000149662   ⟸   ENSMUST00000090749
RefSeq Acc Id: ENSMUSP00000117987   ⟸   ENSMUST00000132846
RefSeq Acc Id: ENSMUSP00000150020   ⟸   ENSMUST00000213200
Protein Domains
PPIase cyclophilin-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P17742-F1-model_v2 AlphaFold P17742 1-164 view protein structure

Promoters
RGD ID:6821592
Promoter ID:MM_KWN:6360
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000001541,   OTTMUST00000001542,   OTTMUST00000001543,   OTTMUST00000001544,   OTTMUST00000001545,   UC007HYO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36116,314,996 - 6,318,067 (+)MPROMDB
RGD ID:6848590
Promoter ID:MM_TRO:1321
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   Brain,   ES_Cell,   MEF_B6
Transcripts:MTR000518.11.142.10,   MTR000518.11.142.9
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36116,318,591 - 6,319,227 (+)MPROMDB
RGD ID:8673902
Promoter ID:EPDNEW_M14981
Type:multiple initiation site
Name:Ppia_1
Description:Mus musculus peptidylprolyl isomerase A , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38116,415,868 - 6,415,928EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97749 AgrOrtholog
Ensembl Genes ENSMUSG00000071866 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000090749.13 UniProtKB/TrEMBL
  ENSMUST00000132846 ENTREZGENE
  ENSMUST00000132846.2 UniProtKB/Swiss-Prot
  ENSMUST00000213200.2 UniProtKB/TrEMBL
Gene3D-CATH 2.40.100.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cyclophilin-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyclophilin-type_PPIase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyclophilin-type_PPIase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyclophilin-type_PPIase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:268373 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:97749 ENTREZGENE
NCBI Gene 268373 ENTREZGENE
PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pro_isomerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ppia PhenoGen
PIRSF Peptidylpro_ismrse UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS CSAPPISMRASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CSA_PPIASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CSA_PPIASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50891 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1L1SRX5_MOUSE UniProtKB/TrEMBL
  A0A1L1SST0_MOUSE UniProtKB/TrEMBL
  P17742 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3TE63 ENTREZGENE, UniProtKB/TrEMBL
  Q3UAJ1 ENTREZGENE, UniProtKB/TrEMBL
  Q5SVY2 ENTREZGENE, UniProtKB/TrEMBL
  Q9CWJ5 ENTREZGENE
  Q9CZK9_MOUSE UniProtKB/TrEMBL
  Q9R137 ENTREZGENE
UniProt Secondary Q9CWJ5 UniProtKB/Swiss-Prot
  Q9R137 UniProtKB/Swiss-Prot