Pim1 (proviral integration site 1) - Rat Genome Database

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Gene: Pim1 (proviral integration site 1) Mus musculus
Analyze
Symbol: Pim1
Name: proviral integration site 1
RGD ID: 11104
MGI Page MGI
Description: Enables ATP binding activity; manganese ion binding activity; and protein serine/threonine kinase activity. Involved in several processes, including positive regulation of brown fat cell differentiation; protein stabilization; and regulation of hematopoietic stem cell proliferation. Predicted to be located in cytosol; nuclear lumen; and plasma membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including brain; genitourinary system; primitive streak; sensory organ; and yolk sac. Orthologous to human PIM1 (Pim-1 proto-oncogene, serine/threonine kinase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Pim; Pim-1; pim-1 oncogene; proto-oncogene serine/threonine-protein kinase pim-1; serine/threonine-protein kinase pim-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391729,709,759 - 29,715,085 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1729,709,727 - 29,715,086 (+)EnsemblGRCm39 Ensembl
GRCm381729,490,785 - 29,496,111 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1729,490,753 - 29,496,112 (+)EnsemblGRCm38mm10GRCm38
MGSCv371729,627,990 - 29,632,410 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361729,217,824 - 29,222,468 (+)NCBIMGSCv36mm8
Celera1730,034,650 - 30,039,059 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1715.38NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(R)-pantothenic acid  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
1,4-dioxane  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,5-hexanedione  (ISO)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-vinylcyclohexene dioxide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
ageladine A  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
amidotrizoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
belinostat  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzoates  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
calix[6]arene  (ISO)
carbendazim  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpromazine  (ISO)
choline  (EXP)
chromium atom  (ISO)
chrysene  (EXP)
ciglitazone  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
flusilazole  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glucose  (ISO)
glycidol  (ISO)
glyphosate  (ISO)
hexaconazole  (EXP)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
ibrutinib  (ISO)
indole-3-methanol  (ISO)
iomeprol  (ISO)
iron atom  (ISO)
iron dichloride  (ISO)
iron(0)  (ISO)
ketoconazole  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
LY294002  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
mifepristone  (ISO)
N-acetyl-L-cysteine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
niclosamide  (ISO)
nitrofen  (ISO)
organoselenium compound  (ISO)
palbociclib  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (ISO)
phenol  (ISO)
PhIP  (EXP)
pirinixic acid  (EXP)
potassium dichromate  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
protein kinase inhibitor  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
sirolimus  (ISO)
sodium arsenite  (EXP,ISO)
sorafenib  (ISO)
succimer  (EXP)
sunitinib  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (EXP,ISO)
tetraphene  (EXP)
thalidomide  (ISO)
thioacetamide  (ISO)
tremolite asbestos  (EXP)
triadimefon  (EXP)
trichostatin A  (ISO)
troglitazone  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
zearalenone  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Genetic maps of mouse chromosome 17 including 12 new anonymous DNA loci and 25 anchor loci. Nadeau JH, etal., Genomics 1991 Jan;9(1):78-89.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Linkage map of mouse chromosome 17: localization of 27 new DNA markers. Vincek V, etal., Genomics 1989 Nov;5(4):773-86.
10. Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Warden CH, etal., Genomics 1993 Nov;18(2):295-307.
11. Chromosomal assignments of 17 structural genes and 11 related DNA fragments in rats (Rattus norvegicus) by Southern blot analysis of rat x mouse somatic cell hybrid clones. Yasue M, etal., Genomics 1992 Apr;12(4):659-64.
Additional References at PubMed
PMID:1337029   PMID:1347473   PMID:1349580   PMID:1350556   PMID:1360278   PMID:1387105   PMID:1559701   PMID:1673105   PMID:1676977   PMID:1676981   PMID:1677769   PMID:1774067  
PMID:1799792   PMID:1825810   PMID:1889746   PMID:1904008   PMID:1936961   PMID:1978715   PMID:2081600   PMID:2250720   PMID:2537153   PMID:2569442   PMID:2882487   PMID:2885372  
PMID:2992942   PMID:3003932   PMID:3015420   PMID:3505665   PMID:3692139   PMID:6327049   PMID:7487989   PMID:7504280   PMID:7558022   PMID:7588749   PMID:7683677   PMID:7689870  
PMID:7749235   PMID:7767003   PMID:7781606   PMID:7829069   PMID:7849408   PMID:7873877   PMID:7873878   PMID:7894168   PMID:7937086   PMID:8094303   PMID:8098710   PMID:8105016  
PMID:8228813   PMID:8233823   PMID:8302582   PMID:8361211   PMID:8390965   PMID:8405685   PMID:8406442   PMID:8499655   PMID:8601779   PMID:8622900   PMID:8660654   PMID:8662221  
PMID:8672143   PMID:8692692   PMID:8706013   PMID:8798769   PMID:8812413   PMID:8827514   PMID:8835526   PMID:8884266   PMID:9294606   PMID:9344654   PMID:9457670   PMID:9530632  
PMID:9570965   PMID:9585437   PMID:9600738   PMID:9722950   PMID:9745038   PMID:9864091   PMID:9922385   PMID:10197595   PMID:10349636   PMID:10366627   PMID:10369676   PMID:10444590  
PMID:10551889   PMID:10602986   PMID:10713710   PMID:10931201   PMID:11042159   PMID:11044607   PMID:11076861   PMID:11217851   PMID:11823475   PMID:11854514   PMID:12135666   PMID:12466851  
PMID:12477932   PMID:14610273   PMID:14706453   PMID:14764533   PMID:14982870   PMID:15199164   PMID:15642745   PMID:15705789   PMID:15798097   PMID:16123140   PMID:16141072   PMID:16141073  
PMID:16712793   PMID:17476689   PMID:17717068   PMID:17942753   PMID:18037896   PMID:18042805   PMID:18216297   PMID:18438430   PMID:18519946   PMID:18767071   PMID:18799693   PMID:18973680  
PMID:19215238   PMID:19528349   PMID:19687226   PMID:19711112   PMID:19895669   PMID:19898770   PMID:19934869   PMID:19965690   PMID:20140016   PMID:20203306   PMID:20663873   PMID:21048108  
PMID:21068407   PMID:21187426   PMID:21267068   PMID:21382889   PMID:21514445   PMID:21600215   PMID:21680901   PMID:21859846   PMID:21873635   PMID:21974958   PMID:22074702   PMID:22080570  
PMID:22101984   PMID:22201128   PMID:22385356   PMID:22466098   PMID:22623646   PMID:22915504   PMID:22944483   PMID:22970245   PMID:23131564   PMID:23202547   PMID:23360755   PMID:23495171  
PMID:23509290   PMID:23530233   PMID:23565217   PMID:23652800   PMID:23676498   PMID:23712827   PMID:23840532   PMID:24244200   PMID:24523322   PMID:24532689   PMID:24777602   PMID:24816488  
PMID:24916111   PMID:26453516   PMID:27099147   PMID:27287229   PMID:27765770   PMID:27779185   PMID:27923061   PMID:28334989   PMID:28659469   PMID:29544221   PMID:29781812   PMID:30816332  
PMID:31349016   PMID:31601787   PMID:32277959   PMID:32619930   PMID:32771000   PMID:32878131   PMID:34741118   PMID:36446848   PMID:37967691   PMID:37992447  


Genomics

Comparative Map Data
Pim1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391729,709,759 - 29,715,085 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1729,709,727 - 29,715,086 (+)EnsemblGRCm39 Ensembl
GRCm381729,490,785 - 29,496,111 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1729,490,753 - 29,496,112 (+)EnsemblGRCm38mm10GRCm38
MGSCv371729,627,990 - 29,632,410 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361729,217,824 - 29,222,468 (+)NCBIMGSCv36mm8
Celera1730,034,650 - 30,039,059 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1715.38NCBI
PIM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38637,170,152 - 37,175,428 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl637,170,152 - 37,175,428 (+)EnsemblGRCh38hg38GRCh38
GRCh37637,137,928 - 37,143,204 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36637,245,964 - 37,251,182 (+)NCBINCBI36Build 36hg18NCBI36
Build 34637,245,963 - 37,251,180NCBI
Celera638,693,003 - 38,698,282 (+)NCBICelera
Cytogenetic Map6p21.2NCBI
HuRef636,856,808 - 36,862,087 (+)NCBIHuRef
CHM1_1637,139,777 - 37,145,056 (+)NCBICHM1_1
T2T-CHM13v2.0636,993,698 - 36,998,970 (+)NCBIT2T-CHM13v2.0
Pim1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8207,556,496 - 7,560,747 (+)NCBIGRCr8
mRatBN7.2207,554,921 - 7,559,174 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl207,554,921 - 7,559,174 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx208,258,177 - 8,262,426 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0207,619,707 - 7,623,956 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0208,092,540 - 8,096,790 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0208,165,423 - 8,169,557 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl208,165,307 - 8,169,555 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02010,364,285 - 10,368,419 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4207,817,403 - 7,821,800 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1207,817,629 - 7,822,027 (+)NCBI
Celera209,096,543 - 9,100,794 (+)NCBICelera
Cytogenetic Map20p12NCBI
Pim1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554375,942,106 - 5,945,431 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554375,940,825 - 5,945,367 (-)NCBIChiLan1.0ChiLan1.0
PIM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2551,637,481 - 51,642,881 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1647,507,387 - 47,512,785 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0636,730,669 - 36,735,954 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1637,923,556 - 37,928,841 (+)NCBIpanpan1.1PanPan1.1panPan2
PIM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1126,213,504 - 6,217,933 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl126,211,867 - 6,217,933 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha126,231,727 - 6,236,155 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0126,677,872 - 6,682,310 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl126,562,116 - 6,682,883 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1126,215,069 - 6,219,497 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0126,296,443 - 6,300,872 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0126,395,246 - 6,399,674 (+)NCBIUU_Cfam_GSD_1.0
Pim1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494641,660,075 - 41,664,724 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647622,295,021 - 22,300,161 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647622,295,023 - 22,300,155 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl732,788,291 - 32,793,878 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1732,788,246 - 32,793,882 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2737,691,993 - 37,697,470 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11734,968,661 - 34,973,920 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1734,968,429 - 34,973,760 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604437,109,813 - 37,115,081 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pim1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475420,808,701 - 20,815,206 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475420,810,398 - 20,815,182 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pim1
155 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:329
Count of miRNA genes:259
Interacting mature miRNAs:270
Transcripts:ENSMUST00000024811
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302038Radpf1_mradiation pulmonary fibrosis 1 (mouse)Not determined171683545533819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
12904013Cfq12_mconditioned fear QTL 12 (mouse)172682878130664955Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172971116434754437Mouse

Markers in Region
Pim1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,491,529 - 29,492,015UniSTSGRCm38
MGSCv371729,628,474 - 29,628,960UniSTSGRCm37
Celera1730,035,133 - 30,035,619UniSTS
Cytogenetic Map17A3.3UniSTS
cM Map1716.4UniSTS
PMC133764P3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,491,387 - 29,491,537UniSTSGRCm38
MGSCv371729,628,332 - 29,628,482UniSTSGRCm37
Celera1730,034,991 - 30,035,141UniSTS
Cytogenetic Map17A3.3UniSTS
PMC133764P4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,491,408 - 29,491,537UniSTSGRCm38
MGSCv371729,628,353 - 29,628,482UniSTSGRCm37
Celera1730,035,012 - 30,035,141UniSTS
Cytogenetic Map17A3.3UniSTS
D17Mit23  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,492,190 - 29,492,323UniSTSGRCm38
MGSCv371729,629,135 - 29,629,268UniSTSGRCm37
Celera1730,035,794 - 30,035,933UniSTS
Cytogenetic Map17A3.3UniSTS
cM Map1717.0UniSTS
Whitehead Genetic176.6UniSTS
Whitehead_YAC17 UniSTS
PMC275438P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,491,156 - 29,491,941UniSTSGRCm38
MGSCv371729,628,101 - 29,628,886UniSTSGRCm37
Celera1730,034,760 - 30,035,545UniSTS
Cytogenetic Map17A3.3UniSTS
Pim1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381729,493,814 - 29,494,720UniSTSGRCm38
MGSCv371729,630,759 - 29,631,665UniSTSGRCm37
Celera1730,037,423 - 30,038,329UniSTS
Cytogenetic Map17A3.3UniSTS
cM Map1716.4UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000024811   ⟹   ENSMUSP00000024811
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,709,727 - 29,715,086 (+)Ensembl
GRCm38.p6 Ensembl1729,490,753 - 29,496,112 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234263
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,711,190 - 29,712,839 (+)Ensembl
GRCm38.p6 Ensembl1729,492,216 - 29,493,865 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234270   ⟹   ENSMUSP00000156987
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,712,381 - 29,713,938 (+)Ensembl
GRCm38.p6 Ensembl1729,493,407 - 29,494,964 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,710,279 - 29,714,419 (+)Ensembl
GRCm38.p6 Ensembl1729,491,305 - 29,495,445 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234478
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,711,170 - 29,714,416 (+)Ensembl
GRCm38.p6 Ensembl1729,492,196 - 29,495,442 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234650   ⟹   ENSMUSP00000157125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,710,130 - 29,712,737 (+)Ensembl
GRCm38.p6 Ensembl1729,491,156 - 29,493,763 (+)Ensembl
RefSeq Acc Id: ENSMUST00000234665   ⟹   ENSMUSP00000157217
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1729,712,011 - 29,715,082 (+)Ensembl
GRCm38.p6 Ensembl1729,493,037 - 29,496,108 (+)Ensembl
RefSeq Acc Id: NM_001364913   ⟹   NP_001351842
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391729,712,059 - 29,715,085 (+)NCBI
GRCm381729,493,085 - 29,496,111 (+)NCBI
Sequence:
RefSeq Acc Id: NM_008842   ⟹   NP_032868
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391729,709,759 - 29,715,085 (+)NCBI
GRCm381729,490,785 - 29,496,111 (+)NCBI
MGSCv371729,627,990 - 29,632,410 (+)RGD
Celera1730,034,650 - 30,039,059 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_032868   ⟸   NM_008842
- Peptide Label: isoform 1
- UniProtKB: P06803 (UniProtKB/Swiss-Prot),   F6XDQ5 (UniProtKB/Swiss-Prot),   Q8CFN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001351842   ⟸   NM_001364913
- Peptide Label: isoform 2
- UniProtKB: A0A3Q4EGX3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000024811   ⟸   ENSMUST00000024811
RefSeq Acc Id: ENSMUSP00000156987   ⟸   ENSMUST00000234270
RefSeq Acc Id: ENSMUSP00000157125   ⟸   ENSMUST00000234650
RefSeq Acc Id: ENSMUSP00000157217   ⟸   ENSMUST00000234665
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P06803-F1-model_v2 AlphaFold P06803 1-313 view protein structure

Promoters
RGD ID:13675420
Promoter ID:EPDNEW_M21859
Type:initiation region
Name:Pim1_1
Description:Mus musculus proviral integration site 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381729,493,002 - 29,493,062EPDNEW
RGD ID:6828466
Promoter ID:MM_KWN:22943
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000024811,   UC008BTA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361729,626,851 - 29,627,912 (+)MPROMDB
RGD ID:6828469
Promoter ID:MM_KWN:22944
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Lung,   MEF_B6,   Spleen
Transcripts:UC008BTB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361729,629,041 - 29,630,122 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97584 AgrOrtholog
Ensembl Genes ENSMUSG00000024014 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000024811 ENTREZGENE
  ENSMUST00000024811.9 UniProtKB/Swiss-Prot
  ENSMUST00000234270.2 UniProtKB/TrEMBL
  ENSMUST00000234650.2 UniProtKB/TrEMBL
  ENSMUST00000234665 ENTREZGENE
  ENSMUST00000234665.2 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PIM1/2/3 UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18712 UniProtKB/Swiss-Prot
MGD MGI:97584 ENTREZGENE
NCBI Gene 18712 ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE PIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE PIM-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pim1 PhenoGen
PIRSF STPK_Pim-1 UniProtKB/Swiss-Prot
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3Q4EGB5_MOUSE UniProtKB/TrEMBL
  A0A3Q4EGX3 ENTREZGENE, UniProtKB/TrEMBL
  F6XDQ5 ENTREZGENE
  P06803 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3TYQ0_MOUSE UniProtKB/TrEMBL
  Q3U4N9_MOUSE UniProtKB/TrEMBL
  Q8CFN8 ENTREZGENE
UniProt Secondary F6XDQ5 UniProtKB/Swiss-Prot
  Q8CFN8 UniProtKB/Swiss-Prot