Pdgfrb (platelet derived growth factor receptor, beta polypeptide) - Rat Genome Database

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Gene: Pdgfrb (platelet derived growth factor receptor, beta polypeptide) Mus musculus
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Symbol: Pdgfrb
Name: platelet derived growth factor receptor, beta polypeptide
RGD ID: 11070
MGI Page MGI
Description: Enables platelet-derived growth factor-activated receptor activity and signaling receptor binding activity. Involved in several processes, including positive regulation of intracellular signal transduction; protein phosphorylation; and vasculature development. Acts upstream of or within several processes, including animal organ development; response to ceramide; and ruffle assembly. Located in cell surface; cytoplasm; and ruffle. Is expressed in several structures, including alimentary system; extraembryonic component; genitourinary system; nervous system; and sensory organ. Used to study basal ganglia calcification; infantile myofibromatosis; myeloproliferative neoplasm; and severe nonproliferative diabetic retinopathy. Human ortholog(s) of this gene implicated in basal ganglia calcification; glioblastoma; infantile myofibromatosis; myeloproliferative neoplasm (multiple); and renal cell carcinoma. Orthologous to human PDGFRB (platelet derived growth factor receptor beta); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; glioma pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI528809; beta platelet-derived growth factor receptor; beta-type platelet-derived growth factor receptor; CD140 antigen-like family member B; CD140b; Pdg; PDGF beta chain; PDGF-R-beta; Pdgfr; PDGFR-1; PDGFR-beta; platelet-derived growth factor receptor 1; platelet-derived growth factor receptor beta; platelet-derived growth factor receptor beta variant 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,178,194 - 61,218,139 (+)NCBIGRCm39mm39
GRCm39 Ensembl1861,178,222 - 61,218,133 (+)Ensembl
GRCm381861,045,127 - 61,085,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1861,045,150 - 61,085,061 (+)EnsemblGRCm38mm10GRCm38
MGSCv371861,204,804 - 61,244,721 (+)NCBIGRCm37mm9NCBIm37
MGSCv361861,170,810 - 61,210,428 (+)NCBImm8
Celera1862,332,161 - 62,372,066 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
atherosclerosis  (IMP)
basal ganglia calcification  (IEA,ISS)
basal ganglia disease  (ISO)
Brain Injuries  (ISO)
breast cancer  (ISO)
breast carcinoma  (ISO)
Breast Neoplasms  (IMP)
calcinosis  (ISO)
Cardiomegaly  (ISO)
choriocarcinoma  (ISO)
Chronic Allograft Nephropathy  (ISO)
Colonic Neoplasms  (IMP)
Dandy-Walker syndrome  (ISO)
Diabetic Nephropathies  (ISO)
Endometrioid Carcinomas  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Colitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
extrahepatic cholestasis  (ISO)
familial adenomatous polyposis 1  (ISO)
genetic disease  (ISO)
glioblastoma  (ISO)
Hereditary Neoplastic Syndromes  (ISO)
Hydatidiform Mole  (ISO)
Hyperoxia  (ISO)
hypertension  (ISO)
Idiopathic Basal Ganglia Calcification 1  (ISO)
Idiopathic Basal Ganglia Calcification 4  (ISO)
infantile myofibromatosis  (IEA,ISO)
Infantile Myofibromatosis 1  (ISO)
Intimal Hyperplasia  (ISO)
Kidney Reperfusion Injury  (ISO)
Kosaki Overgrowth Syndrome  (ISO)
Kuhnt-Junius degeneration  (ISO)
Leydig cell tumor  (ISO)
Lung Neoplasms  (IMP)
microcephaly  (ISO)
middle cerebral artery infarction  (ISO)
myeloproliferative disorder with eosinophilia  (ISO)
myeloproliferative neoplasm  (IEA,ISO)
Neointima  (ISO)
Neoplasm Metastasis  (ISO)
Neurodevelopmental Disorders  (ISO)
oligohydramnios  (ISO)
Ovarian Neoplasms  (ISO)
Parkinsonism  (ISO)
Penttinen-Aula Syndrome  (ISO)
prostate cancer  (ISO)
renal cell carcinoma  (ISO)
sciatic neuropathy  (ISO)
severe nonproliferative diabetic retinopathy  (IEA)
Subarachnoid Hemorrhage  (ISO)
Transplant Rejection  (ISO)
Wounds and Injuries  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dihydromyricetin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(R,R,R)-alpha-tocopherol  (ISO)
(S)-nicotine  (ISO)
1-naphthyl isothiocyanate  (ISO)
1-nitropyrene  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2-(2-Chlorophenyl-4'-chlorophenyl)-1,1-dichloroethene  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6,7-dimethoxy-2-phenylquinoxaline  (ISO)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (ISO)
acetamide  (ISO)
aldrin  (ISO)
all-trans-retinoic acid  (EXP,ISO)
allyl isothiocyanate  (EXP)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzoates  (ISO)
beta-carotene  (ISO)
beta-hexachlorocyclohexane  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bortezomib  (ISO)
bromobenzene  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calciol  (EXP)
captan  (EXP)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
chondroitin sulfate  (ISO)
chromium(6+)  (EXP)
cisplatin  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
curcumin  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
DDD  (ISO)
DDE  (ISO)
DDT  (ISO)
dermatan sulfate  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (EXP)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
diclofenac  (EXP)
dicrotophos  (ISO)
dieldrin  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (EXP)
disodium selenite  (ISO)
disulfiram  (ISO)
doxorubicin  (ISO)
emodin  (ISO)
endrin  (ISO)
entinostat  (EXP)
ethanol  (EXP,ISO)
fenamidone  (EXP)
flutamide  (ISO)
folic acid  (EXP,ISO)
fomepizole  (ISO)
furan  (ISO)
furosemide  (ISO)
gamma-hexachlorocyclohexane  (ISO)
genistein  (ISO)
glutathione  (ISO)
GW 4064  (EXP)
hemin  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (ISO)
indometacin  (ISO)
isotretinoin  (ISO)
L-ascorbic acid  (ISO)
L-cysteine  (ISO)
L-methionine  (EXP,ISO)
lercanidipine  (ISO)
leukotriene D4  (ISO)
lipopolysaccharide  (EXP)
lipoxin A4  (ISO)
losartan  (ISO)
masitinib  (ISO)
melittin  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
nicotine  (ISO)
nitrofen  (ISO)
Nonylphenol  (ISO)
olmesartan  (ISO)
orantinib  (ISO)
oxaliplatin  (ISO)
oxidopamine  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentane-2,3-dione  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
ponatinib  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP)
progesterone  (ISO)
raloxifene  (ISO)
reactive oxygen species  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
Salinomycin  (ISO)
simvastatin  (EXP,ISO)
sodium arsenite  (EXP)
sodium chloride  (ISO)
sorafenib  (ISO)
sulforaphane  (ISO)
tanespimycin  (ISO)
temozolomide  (ISO)
Tesaglitazar  (ISO)
tetrachloromethane  (EXP,ISO)
tetramethylpyrazine  (EXP,ISO)
tetraphene  (EXP)
tetrathiomolybdate(2-)  (ISO)
thiacloprid  (EXP)
thioacetamide  (ISO)
thiophanate-methyl  (EXP)
titanium dioxide  (EXP)
toluene  (ISO)
topotecan  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vitamin E  (ISO)
Y-27632  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
ziram  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adrenal gland development  (IGI)
aging  (ISO)
angiogenesis  (IBA)
aorta morphogenesis  (IGI)
blood vessel development  (IEP)
cardiac myofibril assembly  (IGI)
cardiac vascular smooth muscle cell differentiation  (TAS)
cell chemotaxis  (IBA,ISO)
cell migration  (ISO)
cell migration involved in coronary angiogenesis  (IMP)
cell migration involved in vasculogenesis  (IMP)
cellular response to hydrogen peroxide  (IMP)
chemotaxis  (IEA)
embryonic organ development  (IEP)
glycosaminoglycan biosynthetic process  (ISO)
hemopoiesis  (IMP)
in utero embryonic development  (IMP)
inner ear development  (ISO)
intracellular signal transduction  (ISO)
kidney development  (IMP)
lung growth  (ISO)
male gonad development  (ISO)
metanephric comma-shaped body morphogenesis  (ISO)
metanephric glomerular capillary formation  (IGI)
metanephric glomerular mesangial cell proliferation involved in metanephros development  (IMP)
metanephric glomerular mesangium development  (IEP)
metanephric glomerulus morphogenesis  (ISO)
metanephric mesenchymal cell migration  (ISO)
metanephric mesenchyme development  (ISO)
metanephric S-shaped body morphogenesis  (ISO)
negative regulation of apoptotic process  (ISO)
nitrogen compound metabolic process  (IMP)
peptidyl-tyrosine phosphorylation  (IDA,ISO)
phosphatidylinositol metabolic process  (ISO)
phosphatidylinositol-mediated signaling  (ISO)
phosphorylation  (IEA)
platelet-derived growth factor receptor signaling pathway  (IMP,ISO)
platelet-derived growth factor receptor-beta signaling pathway  (ISO)
positive regulation of apoptotic process  (ISO)
positive regulation of calcium ion import  (IMP)
positive regulation of cell migration  (ISO)
positive regulation of cell population proliferation  (ISO)
positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway  (ISO)
positive regulation of chemotaxis  (IDA)
positive regulation of collagen biosynthetic process  (ISO)
positive regulation of DNA biosynthetic process  (IMP)
positive regulation of ERK1 and ERK2 cascade  (IDA,IMP,ISO)
positive regulation of fibroblast proliferation  (ISO)
positive regulation of hepatic stellate cell activation  (ISO)
positive regulation of kinase activity  (IBA)
positive regulation of MAP kinase activity  (IDA)
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway  (IMP)
positive regulation of mitotic nuclear division  (IDA)
positive regulation of phosphatidylinositol 3-kinase activity  (ISO)
positive regulation of phosphatidylinositol 3-kinase signaling  (IDA)
positive regulation of phospholipase C activity  (ISO)
positive regulation of phosphoprotein phosphatase activity  (ISO)
positive regulation of reactive oxygen species metabolic process  (IMP)
positive regulation of Rho protein signal transduction  (ISO)
positive regulation of smooth muscle cell migration  (IBA,IGI,IMP,ISO)
positive regulation of smooth muscle cell proliferation  (IMP,ISO)
protein autophosphorylation  (IDA,ISO)
protein phosphorylation  (IEA)
regulation of actin cytoskeleton organization  (IGI)
regulation of peptidyl-tyrosine phosphorylation  (IMP)
response to ceramide  (IMP)
response to estradiol  (ISO)
response to estrogen  (ISO)
response to fluid shear stress  (ISO)
response to hydrogen peroxide  (ISO)
response to hyperoxia  (ISO)
response to lipid  (ISO)
response to organic cyclic compound  (ISO)
response to retinoic acid  (ISO)
response to toxic substance  (ISO)
retina vasculature development in camera-type eye  (IGI,IMP)
ruffle assembly  (IDA)
signal transduction  (IDA,ISO)
skeletal system morphogenesis  (IMP)
smooth muscle cell chemotaxis  (IGI)
smooth muscle tissue development  (IMP)
tissue homeostasis  (IMP)
transmembrane receptor protein tyrosine kinase signaling pathway  (IBA)
wound healing  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal abdominal aorta morphology  (IAGP)
abnormal adipose tissue morphology  (IAGP)
abnormal adrenal cortex morphology  (IAGP)
abnormal adrenal gland morphology  (IAGP)
abnormal angiogenesis  (IAGP)
abnormal aorta morphology  (IAGP)
abnormal aorta tunica media morphology  (IAGP)
abnormal aortic arch morphology  (IAGP)
abnormal ascending aorta morphology  (IAGP)
abnormal basement membrane morphology  (IAGP)
abnormal blood vessel morphology  (IAGP)
abnormal blood-retinal barrier function  (IAGP)
abnormal brain vasculature morphology  (IAGP)
abnormal capillary morphology  (IAGP)
abnormal cardiac neural crest cell migration  (IAGP)
abnormal descending aorta morphology  (IAGP)
abnormal embryonic hematopoiesis  (IAGP)
abnormal erythrocyte morphology  (IAGP)
abnormal eye morphology  (IAGP)
abnormal fibroblast migration  (IAGP)
abnormal glomerular capillary thrombosis  (IAGP)
abnormal heart left ventricle morphology  (IAGP)
abnormal heart morphology  (IAGP)
abnormal hypodermis fat layer morphology  (IAGP)
abnormal inguinal fat pad morphology  (IAGP)
abnormal kidney blood vessel morphology  (IAGP)
abnormal kidney physiology  (IAGP)
abnormal left subclavian artery morphology  (IEA)
abnormal mesangial cell morphology  (IAGP)
abnormal mesenteric fat pad morphology  (IAGP)
abnormal nervous system electrophysiology  (IAGP)
abnormal pericyte morphology  (IAGP)
abnormal placenta vasculature  (IAGP)
abnormal placental labyrinth vasculature morphology  (IAGP)
abnormal pulmonary artery morphology  (IEA)
abnormal renal glomerulus morphology  (IAGP)
abnormal response to injury  (IAGP)
abnormal retinal blood vessel morphology  (IAGP)
abnormal retinal blood vessel pattern  (IAGP)
abnormal retinal layer morphology  (IAGP)
abnormal retinal vasculature morphology  (IAGP)
abnormal seminal vesicle morphology  (IEA)
abnormal skeleton morphology  (IAGP)
abnormal smooth muscle morphology  (IAGP)
abnormal social investigation  (IAGP)
abnormal testis morphology  (IAGP)
abnormal thoracic aorta morphology  (IAGP)
abnormal thymus development  (IAGP)
abnormal trophoblast layer morphology  (IAGP)
abnormal vascular endothelial cell morphology  (IAGP)
abnormal vascular smooth muscle physiology  (IAGP)
abnormal venule morphology  (IAGP)
abnormal vitreous body morphology  (IAGP)
abnormal white adipose tissue morphology  (IAGP)
abnormal white fat cell differentation  (IAGP)
absent mesangial cell  (IAGP)
absent podocytes  (IAGP)
anemia  (IAGP)
anisocytosis  (IAGP)
aorta dilation  (IAGP)
atrioventricular septal defect  (IEA)
cardiac fibrosis  (IAGP)
cleft palate  (IAGP)
clinodactyly  (IEA)
cyanosis  (IAGP)
decreased angiogenesis  (IAGP)
decreased body size  (IAGP)
decreased cell proliferation  (IAGP)
decreased circulating fructosamine level  (IEA)
decreased fibroblast apoptosis  (IAGP)
decreased fibroblast proliferation  (IAGP)
decreased glomerular capillary number  (IAGP)
decreased kidney cell proliferation  (IAGP)
decreased neuron number  (IAGP)
decreased prepulse inhibition  (IAGP)
decreased retinal ganglion cell number  (IAGP)
dilated heart atrium  (IAGP)
dilated heart right ventricle  (IAGP)
double outlet right ventricle  (IEA)
embryonic growth retardation  (IAGP)
enlarged heart  (IAGP)
eye hemorrhage  (IAGP)
eye opacity  (IAGP)
failure of chorioallantoic fusion  (IAGP)
female infertility  (IAGP)
fetal bleb  (IAGP)
glomerulosclerosis  (IAGP)
glomerulus hemorrhage  (IAGP)
hemorrhage  (IAGP)
hydrops fetalis  (IAGP)
impaired wound healing  (IAGP)
incomplete embryo turning  (IAGP)
increased aorta wall thickness  (IAGP)
increased apoptosis  (IAGP)
increased blood urea nitrogen level  (IAGP)
increased circulating triglyceride level  (IEA)
increased heart ventricle size  (IAGP)
increased nucleated erythrocyte cell number  (IAGP)
increased retinal apoptosis  (IAGP)
increased susceptibility to injury  (IAGP)
increased susceptibility to neuronal excitotoxicity  (IAGP)
increased vascular endothelial cell number  (IAGP)
increased vascular permeability  (IAGP)
increased white fat cell number  (IAGP)
intracranial hemorrhage  (IAGP)
kidney cysts  (IAGP)
kidney hemorrhage  (IAGP)
kidney microaneurysm  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
male infertility  (IAGP)
micrognathia  (IEA)
midline facial cleft  (IAGP)
muscular ventricular septal defect  (IEA)
myocardial fiber disarray  (IAGP)
no abnormal phenotype detected  (IAGP)
open neural tube  (IAGP)
overriding aortic valve  (IEA)
pallor  (IAGP)
perimembraneous ventricular septal defect  (IAGP)
perinatal lethality  (IAGP)
perinatal lethality, complete penetrance  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
persistent truncus arteriosis  (IAGP)
petechiae  (IEA)
poikilocytosis  (IAGP)
polychromatophilia  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
purpura  (IAGP)
reduced sensorimotor gating  (IAGP)
retinal detachment  (IAGP)
retinal ganglion cell degeneration  (IAGP)
retinal hemorrhage  (IAGP)
retroesophageal right subclavian artery  (IAGP)
rib fusion  (IAGP)
right aortic arch  (IEA)
schistocytosis  (IAGP)
short snout  (IEA)
skin hemorrhage  (IAGP)
small adrenal glands  (IAGP)
small testis  (IAGP)
testicular hemorrhage  (IAGP)
thrombocytopenia  (IAGP)
thymus hypoplasia  (IAGP)
vascular ring  (IEA)
vascular smooth muscle hyperplasia  (IAGP)
ventricular septal defect  (IAGP)
References

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44. Wilczynski SP, etal., Hum Pathol. 2005 Mar;36(3):242-9.
45. Xu L, etal., Cancer Res. 2005 Jul 1;65(13):5711-9.
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Additional References at PubMed
PMID:1324805   PMID:1354640   PMID:1354644   PMID:1660841   PMID:1676978   PMID:2155144   PMID:2567264   PMID:2569767   PMID:3020426   PMID:7542761   PMID:7588258   PMID:7590978  
PMID:7622571   PMID:7649812   PMID:7651355   PMID:7720681   PMID:7730365   PMID:7798193   PMID:7873879   PMID:7958864   PMID:8011581   PMID:8018985   PMID:8096088   PMID:8107807  
PMID:8183548   PMID:8206913   PMID:8245788   PMID:8264620   PMID:8268657   PMID:8288218   PMID:8889548   PMID:8901196   PMID:9010229   PMID:9022058   PMID:9099730   PMID:9171349  
PMID:9210476   PMID:9211853   PMID:9233543   PMID:9242497   PMID:9374392   PMID:9693135   PMID:9734598   PMID:9843497   PMID:9843575   PMID:10347229   PMID:10349636   PMID:10375497  
PMID:10419690   PMID:10500190   PMID:10557054   PMID:10644978   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11114734   PMID:11124809   PMID:11171333   PMID:11217851   PMID:11239463  
PMID:11264163   PMID:11331305   PMID:11331881   PMID:11544480   PMID:11668599   PMID:11698278   PMID:11782318   PMID:11796577   PMID:11872838   PMID:11940581   PMID:12153142   PMID:12167641  
PMID:12181311   PMID:12351659   PMID:12368212   PMID:12370313   PMID:12466851   PMID:12477932   PMID:12586423   PMID:12588999   PMID:12598306   PMID:12614164   PMID:12771133   PMID:12794304  
PMID:12808090   PMID:12937138   PMID:14514732   PMID:14522834   PMID:14624252   PMID:14657000   PMID:14966296   PMID:14993293   PMID:14996938   PMID:15073150   PMID:15207855   PMID:15239958  
PMID:15254974   PMID:15265983   PMID:15284236   PMID:15322537   PMID:15377662   PMID:15454570   PMID:15510105   PMID:15525682   PMID:15541725   PMID:15579434   PMID:15580568   PMID:15590688  
PMID:15650217   PMID:15735755   PMID:15753096   PMID:15782199   PMID:15844178   PMID:15857912   PMID:15902258   PMID:15919073   PMID:15944146   PMID:16037818   PMID:16107612   PMID:16113679  
PMID:16141072   PMID:16141073   PMID:16224065   PMID:16413489   PMID:16456542   PMID:16498405   PMID:16602821   PMID:16690964   PMID:16805849   PMID:16807374   PMID:16846788   PMID:16875435  
PMID:16971512   PMID:16990448   PMID:17141159   PMID:17143286   PMID:17148686   PMID:17289920   PMID:17303670   PMID:17499702   PMID:17504976   PMID:17543594   PMID:17573050   PMID:17609376  
PMID:17616925   PMID:17620338   PMID:17625108   PMID:17656670   PMID:17942966   PMID:17951322   PMID:17971444   PMID:18076756   PMID:18085387   PMID:18159948   PMID:18180311   PMID:18184658  
PMID:18187612   PMID:18194151   PMID:18213577   PMID:18213589   PMID:18243733   PMID:18272822   PMID:18297729   PMID:18298801   PMID:18410236   PMID:18480752   PMID:18483410   PMID:18505839  
PMID:18515860   PMID:18539926   PMID:18559345   PMID:18586678   PMID:18606782   PMID:18627106   PMID:18632559   PMID:18687785   PMID:18762776   PMID:18804439   PMID:18814181   PMID:18817860  
PMID:18948621   PMID:19019919   PMID:19023080   PMID:19030102   PMID:19056881   PMID:19066283   PMID:19087347   PMID:19138992   PMID:19339492   PMID:19357198   PMID:19443644   PMID:19465598  
PMID:19528233   PMID:19531492   PMID:19690384   PMID:19710169   PMID:19742316   PMID:19801450   PMID:19853842   PMID:19998489   PMID:20036637   PMID:20071776   PMID:20299672   PMID:20371769  
PMID:20381543   PMID:20484220   PMID:20489144   PMID:20529858   PMID:20573823   PMID:20580638   PMID:20610572   PMID:20619341   PMID:20643125   PMID:20693161   PMID:20738866   PMID:20876357  
PMID:20944625   PMID:21040844   PMID:21071672   PMID:21089075   PMID:21252157   PMID:21256191   PMID:21267068   PMID:21343363   PMID:21421844   PMID:21427700   PMID:21437241   PMID:21444752  
PMID:21512159   PMID:21535294   PMID:21557454   PMID:21593423   PMID:21606590   PMID:21664579   PMID:21693521   PMID:21704027   PMID:21833587   PMID:21868707   PMID:21873635   PMID:21905163  
PMID:21952111   PMID:21997856   PMID:22027834   PMID:22138754   PMID:22144466   PMID:22158043   PMID:22188481   PMID:22205974   PMID:22264326   PMID:22340501   PMID:22387002   PMID:22431518  
PMID:22510988   PMID:22573622   PMID:22840396   PMID:22880115   PMID:22890161   PMID:22901751   PMID:22907756   PMID:22908324   PMID:22927028   PMID:22940072   PMID:22975322   PMID:22975327  
PMID:23020941   PMID:23091165   PMID:23320101   PMID:23322009   PMID:23349620   PMID:23371905   PMID:23431188   PMID:23441134   PMID:23454370   PMID:23477786   PMID:23529017   PMID:23559562  
PMID:23629811   PMID:23633653   PMID:23644466   PMID:23651497   PMID:23665474   PMID:23750244   PMID:23789091   PMID:23825366   PMID:23862012   PMID:23901112   PMID:23933587   PMID:23946446  
PMID:24029230   PMID:24086766   PMID:24190966   PMID:24194600   PMID:24284212   PMID:24298057   PMID:24319691   PMID:24336108   PMID:24353058   PMID:24367707   PMID:24383871   PMID:24498100  
PMID:24550361   PMID:24727670   PMID:24733830   PMID:24733895   PMID:24747080   PMID:24763086   PMID:24793170   PMID:24803182   PMID:24828040   PMID:24828044   PMID:24858485   PMID:24886827  
PMID:24952961   PMID:25100655   PMID:25249461   PMID:25358792   PMID:25377550   PMID:25380237   PMID:25391964   PMID:25510317   PMID:25516967   PMID:25576928   PMID:25600960   PMID:25708924  
PMID:25733312   PMID:25803852   PMID:25807483   PMID:26020233   PMID:26027930   PMID:26061019   PMID:26120030   PMID:26138478   PMID:26183159   PMID:26208383   PMID:26256287   PMID:26435273  
PMID:26436454   PMID:26437238   PMID:26438731   PMID:26439735   PMID:26455322   PMID:26479710   PMID:26481065   PMID:26511275   PMID:26542011   PMID:26569132   PMID:26599395   PMID:26626462  
PMID:26651999   PMID:26697723   PMID:26764350   PMID:26821812   PMID:26831065   PMID:26858344   PMID:26971580   PMID:26984772   PMID:27009605   PMID:27060598   PMID:27138650   PMID:27141870  
PMID:27165742   PMID:27184910   PMID:27198239   PMID:27338108   PMID:27432740   PMID:27436040   PMID:27516371   PMID:27546376   PMID:27569721   PMID:27608497   PMID:27619504   PMID:27626380  
PMID:27645114   PMID:27778377   PMID:27810956   PMID:27816607   PMID:27856617   PMID:28111199   PMID:28122789   PMID:28129672   PMID:28135240   PMID:28266561   PMID:28329690   PMID:28378742  
PMID:28424212   PMID:28426709   PMID:28441414   PMID:28527294   PMID:28535371   PMID:28535372   PMID:28649987   PMID:28684344   PMID:28752390   PMID:28827364   PMID:28835419   PMID:28924035  
PMID:28924218   PMID:28943241   PMID:29053761   PMID:29077526   PMID:29158445   PMID:29237738   PMID:29290586   PMID:29341790   PMID:29400711   PMID:29444905   PMID:29456135   PMID:29483282  
PMID:29497032   PMID:29514104   PMID:29532549   PMID:29629621   PMID:29667914   PMID:29724654   PMID:29806219   PMID:29901792   PMID:29950483   PMID:30111655   PMID:30121753   PMID:30269986  
PMID:30348676   PMID:30377232   PMID:30389913   PMID:30463880   PMID:30485861   PMID:30550785   PMID:30566624   PMID:30568578   PMID:30571485   PMID:30604742   PMID:30718289   PMID:30771302  
PMID:31036530   PMID:31125253   PMID:31125259   PMID:31185811   PMID:31287804   PMID:31323030   PMID:31336386   PMID:31340157   PMID:31405951   PMID:31543445   PMID:31543758   PMID:31672904  
PMID:31761722   PMID:31894448   PMID:31953387   PMID:31980640   PMID:31987006   PMID:32001436   PMID:32046118   PMID:32046974   PMID:32229310   PMID:32278722   PMID:32290105   PMID:32369449  
PMID:32402291   PMID:32541879   PMID:32648916   PMID:32735640   PMID:32737287   PMID:32737331   PMID:32857951   PMID:32882323   PMID:33113370   PMID:33224039   PMID:33253712   PMID:33619382  
PMID:33707239   PMID:33775822   PMID:33941693   PMID:34112692  


Genomics

Comparative Map Data
Pdgfrb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,178,194 - 61,218,139 (+)NCBIGRCm39mm39
GRCm39 Ensembl1861,178,222 - 61,218,133 (+)Ensembl
GRCm381861,045,127 - 61,085,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1861,045,150 - 61,085,061 (+)EnsemblGRCm38mm10GRCm38
MGSCv371861,204,804 - 61,244,721 (+)NCBIGRCm37mm9NCBIm37
MGSCv361861,170,810 - 61,210,428 (+)NCBImm8
Celera1862,332,161 - 62,372,066 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.41NCBI
PDGFRB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5150,113,839 - 150,155,872 (-)EnsemblGRCh38hg38GRCh38
GRCh385150,113,839 - 150,155,845 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375149,493,402 - 149,535,408 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365149,473,595 - 149,515,615 (-)NCBINCBI36hg18NCBI36
Build 345149,473,595 - 149,515,503NCBI
Celera5145,574,776 - 145,616,798 (-)NCBI
Cytogenetic Map5q32NCBI
HuRef5144,641,381 - 144,683,476 (-)NCBIHuRef
CHM1_15148,925,983 - 148,968,003 (-)NCBICHM1_1
Pdgfrb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21854,500,002 - 54,538,843 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1854,499,964 - 54,538,843 (+)Ensembl
Rnor_6.01856,364,586 - 56,406,381 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1856,364,620 - 56,406,381 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01855,596,682 - 55,637,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,014,475 - 57,053,581 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11857,086,706 - 57,125,813 (+)NCBI
Celera1852,652,411 - 52,691,218 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Pdgfrb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554154,365,743 - 4,403,587 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554154,365,848 - 4,403,317 (+)NCBIChiLan1.0ChiLan1.0
PDGFRB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15151,543,581 - 151,585,630 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5151,543,891 - 151,585,530 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05145,538,330 - 145,580,312 (-)NCBIMhudiblu_PPA_v0panPan3
PDGFRB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1458,925,922 - 58,963,639 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl458,926,351 - 58,962,283 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha458,692,327 - 58,728,259 (+)NCBI
ROS_Cfam_1.0459,406,388 - 59,444,135 (+)NCBI
UMICH_Zoey_3.1459,195,608 - 59,231,543 (+)NCBI
UNSW_CanFamBas_1.0459,310,188 - 59,346,130 (+)NCBI
UU_Cfam_GSD_1.0459,841,270 - 59,877,207 (+)NCBI
Pdgfrb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213143,188,255 - 143,225,815 (+)NCBI
SpeTri2.0NW_0049365044,762,251 - 4,799,789 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDGFRB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2151,155,754 - 151,192,647 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12151,155,753 - 151,192,818 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22158,113,430 - 158,121,798 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PDGFRB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12352,724,061 - 52,766,264 (-)NCBI
ChlSab1.1 Ensembl2352,724,005 - 52,766,234 (-)Ensembl
Vero_WHO_p1.0NW_02366603424,950,813 - 24,993,042 (+)NCBI
Pdgfrb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247749,432,765 - 9,469,690 (-)NCBI

Position Markers
AI528809  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381861,083,582 - 61,083,673UniSTSGRCm38
MGSCv371861,243,236 - 61,243,327UniSTSGRCm37
Celera1862,370,581 - 62,370,672UniSTS
Cytogenetic Map18E1UniSTS
cM Map1830.0UniSTS
Whitehead/MRC_RH18793.36UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185484280185496018Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185267220586672345Mouse
4141431Msmr2_mMSM lymphoma resistance 2 (mouse)Not determined5484280161105798Mouse
1302163Bmd16_mbone mineral density 16 (mouse)Not determined182953484763534993Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961139571Mouse
1302050Radpf4_mradiation pulmonary fibrosis 4 (mouse)Not determined185283308468645706Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185153522985535397Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185984762690702639Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183552556069525779Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184317804877178271Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181389696666965891Mouse
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185091908584919240Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183948686184620653Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183295797666958154Mouse
1300685Scc5_mcolon tumor susceptibility 5 (mouse)Not determined183185541365855562Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185742926790702639Mouse
1301400Lmr13_mleishmaniasis resistance 13 (mouse)Not determined182797631361976451Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184499753768645706Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185982648990702639Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5785721090702639Mouse
4141132Eae18_mexperimental allergic encephalomyelitis susceptibility 18 (mouse)Not determined5745748782586603Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183615795070158108Mouse
10412183Sstapa2_mSuseptibility to Staphylococus aureus infection 2 (mouse)Not determined185666155866819414Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185153522985535397Mouse
4142443Pgis1_mproteoglycan induced spondylitis 1 (mouse)Not determined185315795076826598Mouse
4141857Mhysq5_mmale hybrid sterility QTL 5 (mouse)Not determined2799753761997672Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184674183280741971Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183807349772073497Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185091908584919240Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185904702190702639Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185904702190702639Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183807349772073497Mouse
12910791Pwgrq8_mpre-weaning growth rate QTL 8 (mouse)185788832769216071Mouse
27226720Tibw5_mtibia width 5, proximal, 10 week (mouse)185030000062500000Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184629021680290216Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185904702190702639Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185630000090300000Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184674183280741971Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183807349772073497Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182476282478296340Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185730000090702639Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183807349772073497Mouse
38455998Cdtm1_mCD62L+ CD8 TM cells 1 (mouse)186000000080000000Mouse
12880412V125Dq12_mvitamin D active form serum level QTL 12 (mouse)183010000064100000Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183897060572970721Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185630000090300000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1479
Count of miRNA genes:441
Interacting mature miRNAs:525
Transcripts:ENSMUST00000025522, ENSMUST00000115274
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000025522   ⟹   ENSMUSP00000025522
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,178,222 - 61,218,133 (+)Ensembl
GRCm38.p6 Ensembl1861,045,150 - 61,085,061 (+)Ensembl
RefSeq Acc Id: ENSMUST00000115274   ⟹   ENSMUSP00000110929
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1861,178,272 - 61,218,128 (+)Ensembl
GRCm38.p6 Ensembl1861,045,200 - 61,085,056 (+)Ensembl
RefSeq Acc Id: NM_001146268   ⟹   NP_001139740
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,178,222 - 61,218,139 (+)NCBI
GRCm381861,045,150 - 61,085,067 (+)NCBI
MGSCv371861,204,804 - 61,244,721 (+)RGD
Celera1862,332,161 - 62,372,066 (+)RGD
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008809   ⟹   NP_032835
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,178,222 - 61,218,139 (+)NCBI
GRCm381861,045,150 - 61,085,067 (+)NCBI
MGSCv371861,204,804 - 61,244,721 (+)RGD
Celera1862,332,161 - 62,372,066 (+)RGD
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011246856   ⟹   XP_011245158
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,193,216 - 61,205,693 (+)NCBI
GRCm381861,060,144 - 61,072,623 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250361   ⟹   XP_030106221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391861,178,194 - 61,205,692 (+)NCBI
GRCm381861,045,127 - 61,072,622 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032835   ⟸   NM_008809
- Peptide Label: isoform 2 precursor
- UniProtKB: P05622 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001139740   ⟸   NM_001146268
- Peptide Label: isoform 1 precursor
- UniProtKB: P05622 (UniProtKB/Swiss-Prot),   E9QPE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011245158   ⟸   XM_011246856
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030106221   ⟸   XM_030250361
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000110929   ⟸   ENSMUST00000115274
RefSeq Acc Id: ENSMUSP00000025522   ⟸   ENSMUST00000025522
Protein Domains
Ig-like   Ig-like C2-type   Protein kinase

Promoters
RGD ID:13677928
Promoter ID:EPDNEW_M23113
Type:initiation region
Name:Pdgfrb_1
Description:Mus musculus platelet derived growth factor receptor, beta polypeptide, transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23114  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381861,045,166 - 61,045,226EPDNEW
RGD ID:13677930
Promoter ID:EPDNEW_M23114
Type:single initiation site
Name:Pdgfrb_2
Description:Mus musculus platelet derived growth factor receptor, beta polypeptide, transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23113  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381861,057,783 - 61,057,843EPDNEW
RGD ID:6829456
Promoter ID:MM_KWN:25415
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000115274,   NM_001146268,   NM_008809
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,204,759 - 61,205,259 (+)MPROMDB
RGD ID:6829457
Promoter ID:MM_KWN:25416
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Kidney,   Lung,   MEF_B6
Transcripts:UC008FBM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361861,224,366 - 61,225,812 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97531 AgrOrtholog
Ensembl Genes ENSMUSG00000024620 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000025522 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000110929 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000025522 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000115274 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PGFRB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_rcpt_3_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18596 UniProtKB/Swiss-Prot
MGD MGI:97531 ENTREZGENE
NCBI Gene 18596 ENTREZGENE
Pfam PF00047 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PDGFRB RGD
PhenoGen Pdgfrb PhenoGen
PIRSF Beta-PDGF_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_III UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TyrKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9QN12_MOUSE UniProtKB/TrEMBL
  E9QPE2 ENTREZGENE
  P05622 ENTREZGENE, UniProtKB/Swiss-Prot
  Q003I5_MOUSE UniProtKB/TrEMBL
  Q3TZ27_MOUSE UniProtKB/TrEMBL
  Q3UYC9_MOUSE UniProtKB/TrEMBL
  Q7TMR8_MOUSE UniProtKB/TrEMBL
UniProt Secondary E9QPE2 UniProtKB/Swiss-Prot