AOX3P (aldehyde oxidase 3, pseudogene) - Rat Genome Database

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Gene: AOX3P (aldehyde oxidase 3, pseudogene) Homo sapiens
Analyze
Symbol: AOX3P
Name: aldehyde oxidase 3, pseudogene
RGD ID: 10755376
HGNC Page HGNC:19049
Description: Predicted to enable aldehyde oxidase activity; electron transfer activity; and molybdenum ion binding activity.
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: AOH1; AOX3
RGD Orthologs
Mouse
Alliance Genes
More Info more info ...
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382200,695,723 - 200,738,781 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2200,678,233 - 200,732,539 (+)EnsemblGRCh38hg38GRCh38
GRCh372201,560,446 - 201,603,504 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q33.1NCBI
CHM1_12201,566,489 - 201,609,542 (+)NCBICHM1_1
T2T-CHM13v2.02201,179,102 - 201,222,158 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10893244   PMID:23263164  


Genomics

Comparative Map Data
AOX3P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382200,695,723 - 200,738,781 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2200,678,233 - 200,732,539 (+)EnsemblGRCh38hg38GRCh38
GRCh372201,560,446 - 201,603,504 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q33.1NCBI
CHM1_12201,566,489 - 201,609,542 (+)NCBICHM1_1
T2T-CHM13v2.02201,179,102 - 201,222,158 (+)NCBIT2T-CHM13v2.0
Aox3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,152,294 - 58,241,380 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl158,152,289 - 58,239,857 (+)EnsemblGRCm39 Ensembl
GRCm38158,113,135 - 58,202,221 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,113,130 - 58,200,698 (+)EnsemblGRCm38mm10GRCm38
MGSCv37158,169,980 - 58,257,296 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36158,057,684 - 58,144,991 (+)NCBIMGSCv36mm8
Celera158,626,993 - 58,714,378 (+)NCBICelera
Cytogenetic Map1C1.3NCBI
cM Map128.96NCBI

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:663
Count of miRNA genes:516
Interacting mature miRNAs:559
Transcripts:ENST00000467633, ENST00000469595, ENST00000479041, ENST00000484406, ENST00000491025
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 6
Low 50 89 362 78 47 75 429 46 167 4 242 49 3 415 244
Below cutoff 1957 2065 1112 468 697 312 3397 1746 3064 162 922 1186 156 787 2337 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000467633
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2200,695,734 - 200,700,372 (+)Ensembl
RefSeq Acc Id: ENST00000469595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2200,728,926 - 200,734,109 (+)Ensembl
RefSeq Acc Id: ENST00000484406
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2200,695,839 - 200,731,315 (+)Ensembl
RefSeq Acc Id: ENST00000491025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2200,678,233 - 200,732,539 (+)Ensembl

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:19049 AgrOrtholog
COSMIC AOX3P COSMIC
Ensembl Genes ENSG00000244301 Ensembl
  ENSG00000290905 ENTREZGENE
GTEx ENSG00000244301 GTEx
  ENSG00000290905 GTEx
HGNC ID HGNC:19049 ENTREZGENE
Human Proteome Map AOX3P Human Proteome Map
NCBI Gene AOX3P ENTREZGENE