Gamt (guanidinoacetate methyltransferase) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Gamt (guanidinoacetate methyltransferase) Mus musculus
Analyze
Symbol: Gamt
Name: guanidinoacetate methyltransferase
RGD ID: 10618
MGI Page MGI
Description: Predicted to enable guanidinoacetate N-methyltransferase activity and identical protein binding activity. Acts upstream of or within several processes, including creatine biosynthetic process; regulation of growth; and spermatogenesis. Predicted to be located in cytosol. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; future brain; hepatic primordium; liver; and pancreas. Used to study guanidinoacetate methyltransferase deficiency. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and guanidinoacetate methyltransferase deficiency. Orthologous to human GAMT (guanidinoacetate N-methyltransferase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA571402; guanidinoacetate N-methyltransferase; Spi; Spintz1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,093,985 - 80,096,846 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,093,985 - 80,096,846 (-)EnsemblGRCm39 Ensembl
GRCm381080,258,151 - 80,261,025 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,258,151 - 80,261,012 (-)EnsemblGRCm38mm10GRCm38
MGSCv371079,720,896 - 79,723,713 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361079,661,328 - 79,664,141 (-)NCBIMGSCv36mm8
Celera1081,273,024 - 81,275,841 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-chloropropane-1,2-diol  (EXP,ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP)
amiodarone  (ISO)
amitrole  (ISO)
ammonia  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (ISO)
butanal  (ISO)
carbon nanotube  (EXP)
carmustine  (ISO)
chlordecone  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP,ISO)
diiodine  (ISO)
diquat  (EXP)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethyl methanesulfonate  (ISO)
gentamycin  (ISO)
glycidol  (EXP)
glyphosate  (EXP)
Heliotrine  (ISO)
hydralazine  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
ivermectin  (ISO)
L-ascorbic acid  (EXP)
L-ethionine  (ISO)
lead(0)  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
N-nitrosodiethylamine  (ISO)
omeprazole  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
phenobarbital  (ISO)
phenylephrine  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propanal  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
Senkirkine  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
sodium perchlorate  (ISO)
sulfadimethoxine  (ISO)
tauroursodeoxycholic acid  (ISO)
testosterone  (EXP,ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
Triptolide  (EXP)
urethane  (ISO)
ursodeoxycholic acid  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cell projection  (IEA)
cytoplasm  (IBA)
cytosol  (TAS)
microvillus  (IEA)
nucleus  (IBA)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Homoarginine levels are regulated by L-arginine:glycine amidinotransferase and affect stroke outcome: results from human and murine studies. Choe CU, etal., Circulation. 2013 Sep 24;128(13):1451-61. doi: 10.1161/CIRCULATIONAHA.112.000580. Epub 2013 Sep 4.
2. The Effects of Early-Onset Pre-Eclampsia on Placental Creatine Metabolism in the Third Trimester. Ellery SJ, etal., Int J Mol Sci. 2020 Jan 26;21(3):806. doi: 10.3390/ijms21030806.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Guanidinoacetate methyltransferase deficiency: the first inborn error of creatine metabolism in man. Stockler S, etal., Am J Hum Genet. 1996 May;58(5):914-22.
Additional References at PubMed
PMID:8312439   PMID:8889548   PMID:9325156   PMID:9570966   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14660441  
PMID:14681479   PMID:15028668   PMID:15245487   PMID:15284341   PMID:15489334   PMID:15743892   PMID:15782199   PMID:15792821   PMID:15883212   PMID:16141072   PMID:16141073   PMID:17179051  
PMID:17347380   PMID:17588756   PMID:18602925   PMID:19570237   PMID:21267068   PMID:21873635   PMID:23026748   PMID:23325497   PMID:23715727   PMID:23792673   PMID:28069926   PMID:29209878  
PMID:31853708   PMID:31951021   PMID:32038270   PMID:32409787   PMID:33337958   PMID:34440375   PMID:34702858   PMID:37677999  


Genomics

Comparative Map Data
Gamt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,093,985 - 80,096,846 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,093,985 - 80,096,846 (-)EnsemblGRCm39 Ensembl
GRCm381080,258,151 - 80,261,025 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,258,151 - 80,261,012 (-)EnsemblGRCm38mm10GRCm38
MGSCv371079,720,896 - 79,723,713 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361079,661,328 - 79,664,141 (-)NCBIMGSCv36mm8
Celera1081,273,024 - 81,275,841 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
GAMT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38191,397,026 - 1,401,542 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl191,397,026 - 1,401,570 (-)EnsemblGRCh38hg38GRCh38
GRCh37191,397,025 - 1,401,541 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36191,348,088 - 1,352,552 (-)NCBINCBI36Build 36hg18NCBI36
Build 34191,349,607 - 1,352,552NCBI
Celera191,331,366 - 1,335,830 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef191,171,878 - 1,176,401 (-)NCBIHuRef
CHM1_1191,397,126 - 1,401,670 (-)NCBICHM1_1
T2T-CHM13v2.0191,367,024 - 1,371,540 (-)NCBIT2T-CHM13v2.0
Gamt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8710,099,267 - 10,102,083 (+)NCBIGRCr8
mRatBN7.279,448,590 - 9,451,413 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,448,628 - 9,451,778 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx712,331,403 - 12,334,202 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0714,206,743 - 14,209,542 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0712,068,078 - 12,070,877 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0712,314,848 - 12,317,998 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,314,848 - 12,317,998 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0712,484,097 - 12,487,698 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,959,990 - 10,962,720 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1710,959,989 - 10,962,720 (+)NCBI
Celera77,625,330 - 7,628,480 (+)NCBICelera
Cytogenetic Map7q11NCBI
Gamt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554956,536,544 - 6,539,424 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554956,536,541 - 6,539,424 (+)NCBIChiLan1.0ChiLan1.0
GAMT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2205,743,093 - 5,749,393 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,980,010 - 4,986,337 (-)NCBINHGRI_mPanPan1
PanPan1.1191,371,043 - 1,375,514 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl191,371,312 - 1,375,461 (-)Ensemblpanpan1.1panPan2
GAMT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12057,440,698 - 57,442,588 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2057,231,269 - 57,233,795 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02058,170,588 - 58,173,114 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2058,170,577 - 58,173,106 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12057,226,557 - 57,229,082 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02057,706,242 - 57,708,766 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02057,908,247 - 57,910,773 (+)NCBIUU_Cfam_GSD_1.0
Gamt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118217,110,293 - 217,113,339 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936588721,313 - 724,524 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936588721,436 - 724,475 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAMT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl277,076,566 - 77,079,759 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1277,076,566 - 77,079,751 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,968,844 - 77,972,039 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GAMT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.161,165,016 - 1,178,458 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl61,164,259 - 1,178,354 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660817,693,065 - 7,697,357 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gamt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248287,294,327 - 7,297,303 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248287,294,380 - 7,297,787 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gamt
46 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:930
Count of miRNA genes:420
Interacting mature miRNAs:475
Transcripts:ENSMUST00000020359, ENSMUST00000105363, ENSMUST00000144798, ENSMUST00000148615
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75338568109338767Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073506901107507047Mouse
4142107Obrq12_mobesity resistance QTL 12 (mouse)Not determined7398721682491121Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078381268112381268Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075338568109338767Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075338568109338767Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse

Markers in Region
RH124521  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381080,258,792 - 80,259,039UniSTSGRCm38
MGSCv371079,721,537 - 79,721,784UniSTSGRCm37
Celera1081,273,665 - 81,273,912UniSTS
Cytogenetic Map10C1UniSTS
cM Map1043.0UniSTS
PMC311070P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381080,258,337 - 80,259,218UniSTSGRCm38
MGSCv371079,721,082 - 79,721,963UniSTSGRCm37
Celera1081,273,210 - 81,274,091UniSTS
Cytogenetic Map10C1UniSTS
cM Map1043.0UniSTS
Gamt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10C1UniSTS
cM Map1043.0UniSTS
Gamt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10C1UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000020359   ⟹   ENSMUSP00000020359
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,093,998 - 80,096,802 (-)Ensembl
GRCm38.p6 Ensembl1080,258,164 - 80,260,968 (-)Ensembl
Ensembl Acc Id: ENSMUST00000105363   ⟹   ENSMUSP00000101002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,093,985 - 80,096,846 (-)Ensembl
GRCm38.p6 Ensembl1080,258,151 - 80,261,012 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144798
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,094,627 - 80,095,123 (-)Ensembl
GRCm38.p6 Ensembl1080,258,793 - 80,259,289 (-)Ensembl
Ensembl Acc Id: ENSMUST00000148615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,094,411 - 80,096,752 (-)Ensembl
GRCm38.p6 Ensembl1080,258,577 - 80,260,918 (-)Ensembl
RefSeq Acc Id: NM_001347119   ⟹   NP_001334048
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,093,985 - 80,096,846 (-)NCBI
GRCm381080,258,151 - 80,261,012 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010255   ⟹   NP_034385
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,093,985 - 80,096,846 (-)NCBI
GRCm381080,258,151 - 80,261,012 (-)NCBI
MGSCv371079,720,896 - 79,723,713 (-)RGD
Celera1081,273,024 - 81,275,841 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_034385   ⟸   NM_010255
- Peptide Label: isoform 1
- UniProtKB: Q3TZ58 (UniProtKB/Swiss-Prot),   Q3US90 (UniProtKB/Swiss-Prot),   O35969 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001334048   ⟸   NM_001347119
- Peptide Label: isoform 2
- UniProtKB: O35969 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000101002   ⟸   ENSMUST00000105363
Ensembl Acc Id: ENSMUSP00000020359   ⟸   ENSMUST00000020359
Protein Domains
RMT2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35969-F1-model_v2 AlphaFold O35969 1-236 view protein structure

Promoters
RGD ID:6819306
Promoter ID:MM_KWN:4852
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000045773
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361079,721,596 - 79,722,997 (-)MPROMDB
RGD ID:6819309
Promoter ID:MM_KWN:4853
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000105363,   OTTMUST00000045772,   OTTMUST00000045774,   OTTMUST00000045849
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361079,723,161 - 79,724,722 (-)MPROMDB
RGD ID:8672634
Promoter ID:EPDNEW_M14348
Type:initiation region
Name:Gamt_1
Description:Mus musculus guanidinoacetate methyltransferase , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381080,260,968 - 80,261,028EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098221 AgrOrtholog
Ensembl Genes ENSMUSG00000020150 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000020359 ENTREZGENE
  ENSMUST00000020359.7 UniProtKB/Swiss-Prot
  ENSMUST00000105363 ENTREZGENE
  ENSMUST00000105363.8 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.150 UniProtKB/Swiss-Prot
InterPro GuanidinoAc_N-MeTrfase UniProtKB/Swiss-Prot
  RMT2/GAMT_Mtase UniProtKB/Swiss-Prot
  RMT2_dom UniProtKB/Swiss-Prot
  SAM-dependent_MTases UniProtKB/Swiss-Prot
KEGG Report mmu:14431 UniProtKB/Swiss-Prot
MGD MGI:1098221 ENTREZGENE
NCBI Gene 14431 ENTREZGENE
PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE UniProtKB/Swiss-Prot
  GUANIDINOACETATE N-METHYLTRANSFERASE UniProtKB/Swiss-Prot
PhenoGen Gamt PhenoGen
PIRSF GAMT UniProtKB/Swiss-Prot
PROSITE SAM_RMT2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53335 UniProtKB/Swiss-Prot
UniProt GAMT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TZ58 ENTREZGENE
  Q3US90 ENTREZGENE
UniProt Secondary Q3TZ58 UniProtKB/Swiss-Prot
  Q3US90 UniProtKB/Swiss-Prot