Cyp11b1 (cytochrome P450, family 11, subfamily b, polypeptide 1) - Rat Genome Database

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Gene: Cyp11b1 (cytochrome P450, family 11, subfamily b, polypeptide 1) Mus musculus
Analyze
No known orthologs.
Symbol: Cyp11b1
Name: cytochrome P450, family 11, subfamily b, polypeptide 1
RGD ID: 10428
MGI Page MGI
Description: Enables corticosterone 18-monooxygenase activity. Acts upstream of or within glucocorticoid biosynthetic process. Located in mitochondrion. Is expressed in adrenal gland; gland; lung; and testis. Used to study congenital adrenal hyperplasia. Human ortholog(s) of this gene implicated in several diseases, including congenital adrenal hyperplasia; corticosterone methyloxidase deficiency 1; diabetes mellitus (multiple); hypertension (multiple); and primary hyperaldosteronism (multiple). Orthologous to human CYP11B1 (cytochrome P450 family 11 subfamily B member 1) and CYP11B2 (cytochrome P450 family 11 subfamily B member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA389061; CPN1; Cyp11; Cyp11b; Cyp11b-; Cyp11b-1; FHI; steroid-11-beta-hydroxylase
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391574,706,741 - 74,713,492 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1574,705,974 - 74,713,492 (-)EnsemblGRCm39 Ensembl
GRCm381574,834,892 - 74,841,643 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1574,834,125 - 74,841,643 (-)EnsemblGRCm38mm10GRCm38
MGSCv371574,665,322 - 74,672,073 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361574,662,150 - 74,668,874 (-)NCBIMGSCv36mm8
Celera1576,341,146 - 76,348,165 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1534.29NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Fetal adrenal gland alterations in a rat model of adverse intrauterine environment. Bibeau K, etal., Am J Physiol Regul Integr Comp Physiol. 2010 Apr;298(4):R899-911. Epub 2009 Nov 18.
2. Quantitative assessment of CYP11B1 and CYP11B2 expression in aldosterone-producing adenomas. Fallo F, etal., Eur J Endocrinol. 2002 Dec;147(6):795-802.
3. Aldosterone synthesis in the brain contributes to Dahl salt-sensitive rat hypertension. Gomez-Sanchez EP, etal., Exp Physiol. 2010 Jan;95(1):120-30. Epub 2009 Oct 16.
4. Frame shift by insertion of 2 basepairs in codon 394 of CYP11B1 causes congenital adrenal hyperplasia due to steroid 11 beta-hydroxylase deficiency. Helmberg A, etal., J Clin Endocrinol Metab 1992 Nov;75(5):1278-81.
5. A chimaeric 11 beta-hydroxylase/aldosterone synthase gene causes glucocorticoid-remediable aldosteronism and human hypertension. Lifton RP, etal., Nature. 1992 Jan 16;355(6357):262-5.
6. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
7. MGDs mouse GO annotations MGD data from the GO Consortium
8. Cardiac steroidogenesis and glucocorticoid in the development of cardiac hypertrophy during the progression to heart failure. Ohtani T, etal., J Hypertens. 2009 May;27(5):1074-83.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. Overview of steroidogenic enzymes in the pathway from cholesterol to active steroid hormones. Payne AH and Hales DB, Endocr Rev. 2004 Dec;25(6):947-70.
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
13. Genetic variation in aldosterone synthase predicts plasma glucose levels. Ranade K, etal., Proc Natl Acad Sci U S A. 2001 Nov 6;98(23):13219-24. Epub 2001 Oct 30.
14. Mouse MP Annotation Import Pipeline RGD automated import pipeline
15. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. Single strand conformation polymorphism (SSCP) analysis for the detection of mutations in the CYP11B1 gene. Skinner CA, etal., J Clin Endocrinol Metab. 1996 Jun;81(6):2389-93.
18. An aldosterone synthase gene variant is associated with improvement in left ventricular ejection fraction in dilated cardiomyopathy. Tiago AD, etal., Cardiovasc Res. 2002 Jun;54(3):584-9.
Additional References at PubMed
PMID:1686470   PMID:2233742   PMID:2546938   PMID:7588219   PMID:7590346   PMID:7628695   PMID:7669222   PMID:7750493   PMID:7956345   PMID:8111631   PMID:8543156   PMID:8645611  
PMID:10029587   PMID:10224232   PMID:10349636   PMID:10861000   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12231255   PMID:12466851   PMID:12477932   PMID:14681479   PMID:15289436  
PMID:16141072   PMID:16141073   PMID:16466956   PMID:16949566   PMID:17890294   PMID:18162527   PMID:18614015   PMID:18651133   PMID:18801336   PMID:19029289   PMID:19955443   PMID:21256921  
PMID:21873635   PMID:22580128   PMID:22919064   PMID:23376610   PMID:23471215   PMID:23685333   PMID:24135228   PMID:24580729   PMID:25668066   PMID:25933105   PMID:26108225   PMID:26141512  
PMID:27798095   PMID:28378742   PMID:28893949   PMID:28911199   PMID:29212953   PMID:29440508   PMID:29879378   PMID:30917317   PMID:32243503   PMID:34905510   PMID:36861295   PMID:37727456  


Genomics

Variants

.
Variants in Cyp11b1
219 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:297
Count of miRNA genes:257
Interacting mature miRNAs:272
Transcripts:ENSMUST00000170259
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156158420095584200Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156316390397163995Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156338964681086436Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564306334103425899Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156481182698811946Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156533657899341028Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156552537699525499Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567270698101270847Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570345653104073951Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570349271104073951Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570349271104073951Mouse
25671381Hrsq3_mhost response to SARS QTL 3, eosinophilia (mouse)157214453975844833Mouse
1300844Emo2_memotionality 2 (mouse)Not determined157237245976794493Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157237245979899178Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572382669104073951Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573430144104073951Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157410054082674156Mouse
13442492Mecth2_mmechanosensation threshold 2 (mouse)157466284979387201Mouse

Markers in Region
Cyp11b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15D3UniSTS
cM Map1544.9UniSTS
cM Map1544.9UniSTS
cM Map1544.9UniSTS
cM Map1544.9UniSTS
UniSTS:237323  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381574,835,211 - 74,835,415UniSTSGRCm38
MGSCv371574,665,641 - 74,665,845UniSTSGRCm37
Celera1576,341,465 - 76,341,669UniSTS
Cytogenetic Map15D3UniSTS
cM Map1544.9UniSTS
Cyp11b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15D3UniSTS
cM Map1544.9UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000170259   ⟹   ENSMUSP00000127888
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1574,705,974 - 74,713,492 (-)Ensembl
GRCm38.p6 Ensembl1574,834,125 - 74,841,643 (-)Ensembl
RefSeq Acc Id: NM_001033229   ⟹   NP_001028401
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391574,706,741 - 74,713,492 (-)NCBI
GRCm381574,834,892 - 74,841,643 (-)ENTREZGENE
MGSCv371574,665,322 - 74,672,073 (-)RGD
Celera1576,341,146 - 76,348,165 (-)RGD
cM Map15 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001028401 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI39249 (Get FASTA)   NCBI Sequence Viewer  
  AAI39251 (Get FASTA)   NCBI Sequence Viewer  
  BAE25066 (Get FASTA)   NCBI Sequence Viewer  
  BAE37185 (Get FASTA)   NCBI Sequence Viewer  
  BAE40662 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000127888
  ENSMUSP00000127888.2
RefSeq Acc Id: NP_001028401   ⟸   NM_001033229
- Sequence:
RefSeq Acc Id: ENSMUSP00000127888   ⟸   ENSMUST00000170259

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3TG86-F1-model_v2 AlphaFold Q3TG86 1-501 view protein structure

Promoters
RGD ID:8683978
Promoter ID:EPDNEW_M20020
Type:multiple initiation site
Name:Cyp11b1_1
Description:Mus musculus cytochrome P450, family 11, subfamily b, polypeptide1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381574,841,619 - 74,841,679EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88583 AgrOrtholog
Ensembl Genes ENSMUSG00000075604 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000170259 ENTREZGENE
  ENSMUST00000170259.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.630.10 UniProtKB/TrEMBL
InterPro Cyt_P450 UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/TrEMBL
  Cyt_P450_mitochondrial UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/TrEMBL
KEGG Report mmu:110115 UniProtKB/TrEMBL
MGD MGI:88583 ENTREZGENE
NCBI Gene 110115 ENTREZGENE
PANTHER PTHR24279 UniProtKB/TrEMBL
  STEROID 11-BETA-MONOOXYGENASE UniProtKB/TrEMBL
Pfam p450 UniProtKB/TrEMBL
PhenoGen Cyp11b1 PhenoGen
PRINTS MITP450 UniProtKB/TrEMBL
  P450 UniProtKB/TrEMBL
PROSITE CYTOCHROME_P450 UniProtKB/TrEMBL
Superfamily-SCOP Cytochrome_P450 UniProtKB/TrEMBL
UniProt Q3TG86_MOUSE UniProtKB/TrEMBL
  Q3TR45_MOUSE UniProtKB/TrEMBL
  Q3UQH5_MOUSE UniProtKB/TrEMBL