EIF1AXP2 (EIF1AX pseudogene 2) - Rat Genome Database

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Gene: EIF1AXP2 (EIF1AX pseudogene 2) Homo sapiens
Analyze
Symbol: EIF1AXP2
Name: EIF1AX pseudogene 2
RGD ID: 10400454
HGNC Page HGNC:44295
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: eukaryotic translation initiation factor 1A, X-linked pseudogene 2
Related Functional Gene: EIF1AX  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381465,528,830 - 65,529,574 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1465,528,830 - 65,529,574 (-)EnsemblGRCh38hg38GRCh38
GRCh371465,995,548 - 65,996,292 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map14q23.3NCBI
CHM1_11465,933,731 - 65,934,475 (-)NCBICHM1_1
T2T-CHM13v2.01459,733,592 - 59,734,336 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:52
Interacting mature miRNAs:52
Transcripts:ENST00000555940
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 5 1 3 1 65 1 20 24 3 12 4 1 13 1
Below cutoff 187 76 86 22 160 13 236 65 416 19 155 96 10 42 162

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000555940
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1465,528,830 - 65,529,574 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC EIF1AXP2 COSMIC
Ensembl Genes ENSG00000258980 Ensembl, ENTREZGENE
GTEx ENSG00000258980 GTEx
HGNC ID HGNC:44295 ENTREZGENE
Human Proteome Map EIF1AXP2 Human Proteome Map
NCBI Gene EIF1AXP2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 EIF1AXP2  EIF1AX pseudogene 2    eukaryotic translation initiation factor 1A, X-linked pseudogene 2  Symbol and/or name change 5135510 APPROVED