NAMPTP3 (nicotinamide phosphoribosyltransferase pseudogene 3) - Rat Genome Database

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Gene: NAMPTP3 (nicotinamide phosphoribosyltransferase pseudogene 3) Homo sapiens
Analyze
Symbol: NAMPTP3
Name: nicotinamide phosphoribosyltransferase pseudogene 3
RGD ID: 10399836
HGNC Page HGNC:51313
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: NAMPT  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381635,085,896 - 35,086,119 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1635,085,896 - 35,086,119 (+)EnsemblGRCh38hg38GRCh38
GRCh371634,320,267 - 34,320,490 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map16p11.2NCBI
CHM1_11635,661,028 - 35,661,251 (+)NCBICHM1_1
T2T-CHM13v2.01639,042,792 - 39,043,015 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:60
Count of miRNA genes:60
Interacting mature miRNAs:60
Transcripts:ENST00000569273
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 22 20 7 2 2 1 95 12 5
Below cutoff 47 164 30 20 129 13 83 39 64 12 186 50 7 42 62

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000569273
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1635,085,896 - 35,086,119 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC NAMPTP3 COSMIC
Ensembl Genes ENSG00000261053 Ensembl, ENTREZGENE
GTEx ENSG00000261053 GTEx
HGNC ID HGNC:51313 ENTREZGENE
Human Proteome Map NAMPTP3 Human Proteome Map
NCBI Gene NAMPTP3 ENTREZGENE