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Gene: Col12a1 (collagen, type XII, alpha 1) Mus musculus
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Symbol: Col12a1
Name: collagen, type XII, alpha 1
Description: Predicted to have extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in endodermal cell differentiation and growth plate cartilage chondrocyte morphogenesis. Localizes to the collagen-containing extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Is expressed in several structures, including connective tissue; mitral valve; sensory organ; skeleton; and skin. Orthologous to human COL12A1 (collagen type XII alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AW743884; collagen alpha-1(XII) chain; procollagen, type XII, alpha 1
Orthologs:
Homo sapiens (human) : COL12A1 (collagen type XII alpha 1 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col12a1 (collagen type XII alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col12a1 (collagen type XII alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL12A1 (collagen type XII alpha 1 chain)
Canis lupus familiaris (dog) : COL12A1 (collagen type XII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col12a1 (collagen type XII alpha 1 chain)
Sus scrofa (pig) : COL12A1 (collagen type XII alpha 1 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38979,598,987 - 79,721,141 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37979,446,798 - 79,566,485 (-)NCBIGRCm37mm9NCBIm37
MGSCv36979,387,443 - 79,504,149 (-)NCBImm8
Celera976,744,484 - 76,862,867 (-)NCBICelera
Cytogenetic Map9 E1NCBI
cM Map943.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col12a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 10372
Created: 2000-05-25
Species: Mus musculus
Last Modified: 2019-09-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.