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Gene: Col11a2 (collagen, type XI, alpha 2) Mus musculus
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Symbol: Col11a2
Name: collagen, type XI, alpha 2
Description: Predicted to have extracellular matrix structural constituent. Involved in several processes, including collagen fibril organization; sensory perception of sound; and skeletal system development. Localizes to collagen trimer. Is expressed in several structures, including genitourinary system; hemolymphoid system gland; limb; liver; and skeletal system. Used to study Stickler syndrome; autosomal dominant nonsyndromic deafness 13; and otospondylomegaepiphyseal dysplasia, autosomal recessive. Human ortholog(s) of this gene implicated in cleft palate; nonsyndromic deafness (multiple); and osteochondrodysplasia (multiple). Orthologous to human COL11A2 (collagen type XI alpha 2 chain).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: collagen alpha-2(XI) chain; procollagen, type XI, alpha 2
Orthologs:
Homo sapiens (human) : COL11A2 (collagen type XI alpha 2 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col11a2 (collagen type XI alpha 2 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col11a2 (collagen type XI alpha 2 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL11A2 (collagen type XI alpha 2 chain)
Canis lupus familiaris (dog) : COL11A2 (collagen type XI alpha 2 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col11a2 (collagen type XI alpha 2 chain)
Sus scrofa (pig) : COL11A2 (collagen type XI alpha 2 chain)
Chlorocebus sabaeus (African green monkey) : COL11A2 (collagen type XI alpha 2 chain)
Heterocephalus glaber (naked mole-rat) : Col11a2 (collagen type XI alpha 2 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38.p6 Ensembl1734,039,437 - 34,066,685 (+)EnsemblGRCm38mm10GRCm38
GRCm381734,038,919 - 34,066,684 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371734,176,382 - 34,203,187 (+)NCBIGRCm37mm9NCBIm37
MGSCv361733,649,891 - 33,676,696 (+)NCBImm8
Celera1736,785,570 - 36,812,404 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col11a2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 10371
Created: 2000-05-25
Species: Mus musculus
Last Modified: 2020-06-30
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.