Cck (cholecystokinin) - Rat Genome Database
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Gene: Cck (cholecystokinin) Mus musculus
Analyze
Symbol: Cck
Name: cholecystokinin
RGD ID: 10298
MGI Page MGI
Description: Exhibits neuropeptide hormone activity. Involved in axonogenesis; eating behavior; and neuron migration. Localizes to axon. Is expressed in several structures, including central nervous system; eye; genitourinary system; gut; and immune system. Orthologous to human CCK (cholecystokinin).
Type: protein-coding
RefSeq Status: REVIEWED
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399121,318,890 - 121,324,760 (-)NCBIGRCm39mm39
GRCm389121,489,824 - 121,495,694 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9121,489,824 - 121,495,694 (-)EnsemblGRCm38mm10GRCm38
MGSCv379121,398,942 - 121,404,807 (-)NCBIGRCm37mm9NCBIm37
MGSCv369121,338,523 - 121,344,360 (-)NCBImm8
Celera9121,960,523 - 121,966,357 (-)NCBICelera
Cytogenetic Map9F4NCBI
cM Map972.43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (EXP)
1,2-dimethylhydrazine  (EXP)
15-acetyldeoxynivalenol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,4,7,8-Pentachlorodibenzofuran  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-acetamidofluorene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-acetyldeoxynivalenol  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
5-aza-2'-deoxycytidine  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (ISO)
apomorphine  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bromosulfophthalein  (ISO)
butanal  (ISO)
butyric acid  (EXP)
capsaicin  (EXP,ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP,ISO)
clozapine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cylindrospermopsin  (ISO)
deoxynivalenol  (EXP)
dibutyl phthalate  (ISO)
dinophysistoxin 1  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
ethanol  (EXP)
ethylene glycol bis(2-aminoethyl)tetraacetic acid  (EXP)
fenamidone  (EXP)
fluoxetine  (EXP,ISO)
folic acid  (EXP)
Fusarenone X  (EXP)
genistein  (EXP)
haloperidol  (ISO)
hydrogen peroxide  (ISO)
irinotecan  (ISO)
kainic acid  (ISO)
malathion  (ISO)
melatonin  (ISO)
methamphetamine  (ISO)
methotrexate  (ISO)
methylseleninic acid  (ISO)
morphine  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-Nitrosopyrrolidine  (ISO)
naloxone  (ISO)
nicotine  (EXP)
nitrendipine  (EXP)
nitrobenzenes  (ISO)
Nivalenol  (EXP)
octreotide  (ISO)
orlistat  (ISO)
paracetamol  (ISO)
parathion  (ISO)
parathion-methyl  (ISO)
PCB138  (EXP)
pentanal  (ISO)
progesterone  (EXP)
propanal  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
ruthenium red  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium fluoride  (ISO)
Sodium oleate  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
triphenylphosphane oxide  (EXP)
U-73122  (EXP)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:1302014   PMID:1353694   PMID:1354648   PMID:1686839   PMID:1733847   PMID:2011497   PMID:2572508   PMID:2575582   PMID:3862083   PMID:7913715   PMID:8020952   PMID:8100981  
PMID:8288240   PMID:8314596   PMID:8325648   PMID:8336951   PMID:8406443   PMID:8486374   PMID:8530091   PMID:8563165   PMID:8631275   PMID:8641130   PMID:8748389   PMID:8825940  
PMID:8854867   PMID:8876222   PMID:8889548   PMID:9027482   PMID:9141651   PMID:9148921   PMID:9192769   PMID:9275097   PMID:9344657   PMID:9349522   PMID:9742148   PMID:9932288  
PMID:10330022   PMID:10331949   PMID:10349636   PMID:10536058   PMID:10615124   PMID:10821773   PMID:10920050   PMID:11042159   PMID:11076861   PMID:11208732   PMID:11312140   PMID:11714850  
PMID:12456641   PMID:12472887   PMID:12477932   PMID:12479974   PMID:12576089   PMID:12746872   PMID:14643757   PMID:14681479   PMID:14762785   PMID:14973278   PMID:15075450   PMID:15152034  
PMID:15242968   PMID:15374756   PMID:15590741   PMID:15655834   PMID:16002530   PMID:16093397   PMID:16141072   PMID:16141073   PMID:16174778   PMID:16230531   PMID:16266771   PMID:16380713  
PMID:16602821   PMID:16673392   PMID:16707556   PMID:16782213   PMID:16951258   PMID:16962573   PMID:16987237   PMID:17023535   PMID:17101553   PMID:17105752   PMID:17228339   PMID:17400205  
PMID:17706959   PMID:17911046   PMID:17953485   PMID:17988662   PMID:18028541   PMID:18160529   PMID:18400903   PMID:18462884   PMID:18519800   PMID:18554416   PMID:18577515   PMID:18720023  
PMID:18721803   PMID:18939974   PMID:18987169   PMID:19020049   PMID:19131325   PMID:19580868   PMID:19836465   PMID:19892785   PMID:20011219   PMID:20117110   PMID:20226774   PMID:20352619  
PMID:20364088   PMID:20507551   PMID:20534724   PMID:20691176   PMID:20731710   PMID:20883684   PMID:21085653   PMID:21264794   PMID:21267068   PMID:21472126   PMID:21491160   PMID:21602512  
PMID:21677750   PMID:21765815   PMID:21862448   PMID:21873635   PMID:21885869   PMID:21943598   PMID:22010007   PMID:22069189   PMID:22155653   PMID:22178591   PMID:22387004   PMID:22514301  
PMID:22613736   PMID:22869346   PMID:23027805   PMID:23054308   PMID:23064014   PMID:23064108   PMID:23233532   PMID:23349631   PMID:23429478   PMID:23431145   PMID:23564449   PMID:23816469  
PMID:23863478   PMID:23863714   PMID:23940571   PMID:24048849   PMID:24163148   PMID:24194600   PMID:24348900   PMID:24576871   PMID:24619096   PMID:24692543   PMID:24704498   PMID:24717432  
PMID:24817409   PMID:24899708   PMID:24929016   PMID:24952961   PMID:25004095   PMID:25058882   PMID:25071457   PMID:25084987   PMID:25104499   PMID:25155958   PMID:25383904   PMID:25470549  
PMID:25787141   PMID:25875176   PMID:25883113   PMID:25984632   PMID:26169832   PMID:26171590   PMID:26241122   PMID:26394663   PMID:26569394   PMID:26743624   PMID:26744409   PMID:26920055  
PMID:26948890   PMID:26974347   PMID:27032885   PMID:27102657   PMID:27301688   PMID:27346531   PMID:27497223   PMID:27565351   PMID:27618674   PMID:27626380   PMID:27655933   PMID:27923657  
PMID:28041852   PMID:28166221   PMID:28228269   PMID:28298361   PMID:28324023   PMID:28391401   PMID:28394324   PMID:28434802   PMID:28457596   PMID:28514446   PMID:28521244   PMID:28735749  
PMID:28768657   PMID:28800615   PMID:28919867   PMID:28942923   PMID:28964791   PMID:28985566   PMID:29184212   PMID:29438473   PMID:29572837   PMID:29689292   PMID:30038273   PMID:30209395  
PMID:30389916   PMID:30643290   PMID:30734936   PMID:30834305   PMID:30850520   PMID:30902899   PMID:31099752   PMID:31209151   PMID:31282864   PMID:31308792   PMID:31314171   PMID:31341279  
PMID:31630675   PMID:31636080   PMID:31668390   PMID:31784286   PMID:31811178   PMID:31955990   PMID:32005764   PMID:32173534   PMID:32325033   PMID:32675279   PMID:32723474   PMID:32879487  
PMID:33057429   PMID:33238113  


Genomics

Comparative Map Data
Cck
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399121,318,890 - 121,324,760 (-)NCBIGRCm39mm39
GRCm389121,489,824 - 121,495,694 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9121,489,824 - 121,495,694 (-)EnsemblGRCm38mm10GRCm38
MGSCv379121,398,942 - 121,404,807 (-)NCBIGRCm37mm9NCBIm37
MGSCv369121,338,523 - 121,344,360 (-)NCBImm8
Celera9121,960,523 - 121,966,357 (-)NCBICelera
Cytogenetic Map9F4NCBI
cM Map972.43NCBI
CCK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl342,257,825 - 42,266,185 (-)EnsemblGRCh38hg38GRCh38
GRCh38342,257,826 - 42,266,185 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37342,299,318 - 42,307,677 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh37342,299,315 - 42,307,662 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36342,274,322 - 42,281,399 (-)NCBINCBI36hg18NCBI36
Build 34342,274,321 - 42,281,399NCBI
Celera342,238,692 - 42,247,029 (-)NCBI
Cytogenetic Map3p22.1NCBI
HuRef342,342,652 - 42,351,001 (-)NCBIHuRef
CHM1_1342,250,423 - 42,258,799 (-)NCBICHM1_1
Cck
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28121,153,499 - 121,160,194 (-)NCBI
Rnor_6.0 Ensembl8130,120,523 - 130,127,392 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08130,120,525 - 130,127,515 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08129,312,785 - 129,319,582 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48126,492,636 - 126,499,220 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18126,512,372 - 126,518,954 (-)NCBI
Celera8120,288,523 - 120,295,093 (-)NCBICelera
RH 3.4 Map81282.1RGD
RH 3.4 Map81254.7RGD
Cytogenetic Map8q32NCBI
Cck
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542028,438,806 - 28,443,458 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542028,438,806 - 28,443,458 (+)NCBIChiLan1.0ChiLan1.0
CCK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1342,431,021 - 42,439,396 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl342,431,022 - 42,439,396 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0342,168,012 - 42,176,358 (-)NCBIMhudiblu_PPA_v0panPan3
CCK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2311,414,249 - 11,454,198 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12311,414,254 - 11,419,990 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cck
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366952,776,705 - 2,782,280 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1325,937,645 - 25,946,197 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11325,940,674 - 25,945,879 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21328,610,211 - 28,615,371 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CCK
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1223,698,192 - 3,705,443 (-)NCBI
ChlSab1.1 Ensembl223,698,173 - 3,704,956 (-)Ensembl
Cck
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473077,310,080 - 77,314,258 (+)NCBI

Position Markers
Cck  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv379121,399,030 - 121,399,211UniSTSGRCm37
MGSCv379121,399,227 - 121,399,319UniSTSGRCm37
Celera9121,960,808 - 121,960,900UniSTS
Celera9121,960,611 - 121,960,792UniSTS
Cytogenetic Map9F4UniSTS
cM Map971.0UniSTS
cM Map971.0UniSTS
X59520  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,489,901 - 121,490,042UniSTSGRCm38
MGSCv379121,399,019 - 121,399,160UniSTSGRCm37
Celera9121,960,600 - 121,960,741UniSTS
Cytogenetic Map9F4UniSTS
cM Map971.0UniSTS
Whitehead/MRC_RH91227.66UniSTS
UniSTS:236286  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,489,827 - 121,490,037UniSTSGRCm38
MGSCv379121,398,945 - 121,399,155UniSTSGRCm37
Celera9121,960,526 - 121,960,736UniSTS
Cytogenetic Map9F4UniSTS
cM Map971.0UniSTS
Cck  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F4UniSTS
Cck  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,489,912 - 121,490,093UniSTSGRCm38
MGSCv379121,399,030 - 121,399,211UniSTSGRCm37
Celera9121,960,611 - 121,960,792UniSTS
Cytogenetic Map9F4UniSTS
cM Map971.0UniSTS
Cck  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,490,109 - 121,490,201UniSTSGRCm38
MGSCv379121,399,227 - 121,399,319UniSTSGRCm37
Celera9121,960,808 - 121,960,900UniSTS
Cytogenetic Map9F4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:176
Count of miRNA genes:156
Interacting mature miRNAs:167
Transcripts:ENSMUST00000035120
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000035120   ⟹   ENSMUSP00000035120
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,489,824 - 121,495,694 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213106   ⟹   ENSMUSP00000149410
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,490,160 - 121,494,860 (-)Ensembl
RefSeq Acc Id: ENSMUST00000215228   ⟹   ENSMUSP00000149679
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,489,943 - 121,494,840 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216138   ⟹   ENSMUSP00000150080
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,489,824 - 121,495,639 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216176   ⟹   ENSMUSP00000149163
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,489,824 - 121,493,564 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217581   ⟹   ENSMUSP00000150557
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,490,183 - 121,494,510 (-)Ensembl
RefSeq Acc Id: NM_001284508   ⟹   NP_001271437
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,318,890 - 121,324,760 (-)NCBI
GRCm389121,489,824 - 121,495,694 (-)NCBI
Celera9121,960,523 - 121,966,362 (-)NCBI
Sequence:
RefSeq Acc Id: NM_031161   ⟹   NP_112438
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,318,890 - 121,324,760 (-)NCBI
GRCm389121,489,824 - 121,495,694 (-)NCBI
MGSCv379121,398,942 - 121,404,807 (-)RGD
Celera9121,960,523 - 121,966,362 (-)NCBI
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017313116   ⟹   XP_017168605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,318,890 - 121,324,148 (-)NCBI
GRCm389121,489,824 - 121,495,082 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_112438   ⟸   NM_031161
- Peptide Label: isoform 1 preproprotein
- UniProtKB: P09240 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001271437   ⟸   NM_001284508
- Peptide Label: isoform 2 precursor
- UniProtKB: P09240 (UniProtKB/Swiss-Prot),   Q8R041 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017168605   ⟸   XM_017313116
- Peptide Label: isoform X1
- UniProtKB: P09240 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000150557   ⟸   ENSMUST00000217581
RefSeq Acc Id: ENSMUSP00000035120   ⟸   ENSMUST00000035120
RefSeq Acc Id: ENSMUSP00000149410   ⟸   ENSMUST00000213106
RefSeq Acc Id: ENSMUSP00000150080   ⟸   ENSMUST00000216138
RefSeq Acc Id: ENSMUSP00000149163   ⟸   ENSMUST00000216176
RefSeq Acc Id: ENSMUSP00000149679   ⟸   ENSMUST00000215228
Protein Domains
Gastrin

Promoters
RGD ID:6844295
Promoter ID:MM_KWN:59196
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000060307,   NM_031161
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369121,404,466 - 121,404,966 (-)MPROMDB
RGD ID:8671250
Promoter ID:EPDNEW_M13656
Type:initiation region
Name:Cck_1
Description:Mus musculus cholecystokinin , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389121,495,662 - 121,495,722EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88297 AgrOrtholog
Ensembl Genes ENSMUSG00000032532 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000035120 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000149163 UniProtKB/TrEMBL
  ENSMUSP00000149410 UniProtKB/TrEMBL
  ENSMUSP00000149679 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000150080 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000150557 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035120 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000213106 UniProtKB/TrEMBL
  ENSMUST00000215228 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000216138 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000216176 UniProtKB/TrEMBL
  ENSMUST00000217581 UniProtKB/TrEMBL
InterPro CCK-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gastrin/CCK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gastrin/cholecystokinin_CS UniProtKB/Swiss-Prot
KEGG Report mmu:12424 UniProtKB/Swiss-Prot
MGD MGI:88297 ENTREZGENE
NCBI Gene 12424 ENTREZGENE
PANTHER PTHR10786 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Gastrin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cck PhenoGen
PROSITE GASTRIN UniProtKB/Swiss-Prot
UniProt A0A1L1SQR9_MOUSE UniProtKB/TrEMBL
  A0A1L1SRD3_MOUSE UniProtKB/TrEMBL
  A0A1L1SU12_MOUSE UniProtKB/TrEMBL
  CCKN_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8R041 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q53WS9 UniProtKB/Swiss-Prot
  Q9DCL5 UniProtKB/Swiss-Prot