Anxa1 (annexin A1) - Rat Genome Database
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Gene: Anxa1 (annexin A1) Mus musculus
Analyze
Symbol: Anxa1
Name: annexin A1
RGD ID: 10164
MGI Page MGI
Description: Predicted to contribute to single-stranded DNA binding activity and single-stranded RNA binding activity. Involved in several processes, including arachidonic acid secretion; myoblast migration involved in skeletal muscle regeneration; and positive regulation of neutrophil apoptotic process. Localizes to several cellular components, including apical plasma membrane; lateral plasma membrane; and sarcolemma. Predicted to colocalize with actin filament. Is expressed in several structures, including alimentary system; central nervous system; respiratory system; skeleton; and skin. Human ortholog(s) of this gene implicated in brain ischemia and pancreatic cancer. Orthologous to human ANXA1 (annexin A1); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; INTERACTS WITH (R)-noradrenaline; 1,1-dichloroethene; 1,2-dichloroethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: annexin I; annexin-1; Anx; Anx-1; Anx-A1; C430014K04Rik; calpactin II; calpactin-2; chromobindin-9; lipocortin 1; lipocortin I; Lp; Lpc; Lpc-1; Lpc1; p35; phospholipase A2 inhibitory protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391920,350,798 - 20,368,035 (-)NCBIGRCm39mm39
GRCm381920,373,434 - 20,390,671 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1920,373,428 - 20,390,944 (-)EnsemblGRCm38mm10GRCm38
MGSCv371920,447,924 - 20,465,161 (-)NCBIGRCm37mm9NCBIm37
MGSCv361920,440,455 - 20,457,696 (-)NCBImm8
Celera1921,098,423 - 21,115,607 (-)NCBICelera
Cytogenetic Map19BNCBI
cM Map1913.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acute kidney failure  (ISO)
Animal Mammary Neoplasms  (ISO)
asthma  (IMP)
Blister  (ISO)
brain ischemia  (ISO)
Breast Neoplasms  (ISO)
carcinoma  (ISO)
cataract  (IAGP,ISO)
Cerebral Hemorrhage  (ISO)
cerebral infarction  (ISO)
colitis  (ISO)
contact dermatitis  (IMP)
COVID-19  (ISO)
Craniofacial Abnormalities  (ISO)
Delayed Hypersensitivity  (IMP)
Discoid Lupus Erythematosus  (ISO)
dry eye syndrome  (ISO)
ductal carcinoma in situ  (ISO)
encephalitis  (IMP)
esophagus squamous cell carcinoma  (ISO)
Experimental Arthritis  (IMP,ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Autoimmune Neuritis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
Hyperalgesia  (ISO)
hypertension  (ISO)
hyperthyroidism  (ISO)
hypothyroidism  (ISO)
Inflammation  (ISO)
invasive ductal carcinoma  (ISO)
ischemia  (ISO)
keratosis follicularis  (ISO)
kidney disease  (ISO)
Kidney Reperfusion Injury  (ISO)
lung adenocarcinoma  (ISO)
Lymphatic Metastasis  (ISO)
malignant astrocytoma  (ISO)
Mammary Neoplasms, Experimental  (ISO)
Mouth Neoplasms  (ISO)
Myocardial Reperfusion Injury  (IMP,ISO)
Nasal Polyps  (ISO)
Neoplasm Invasiveness  (ISO)
Neoplasm Metastasis  (IMP,ISO)
Ocular Toxoplasmosis  (IEP)
pancreatic cancer  (ISO)
paranasal sinus benign neoplasm  (ISO)
pleurisy  (ISO)
Prostatic Neoplasms  (ISO)
psoriasis  (ISO)
pulmonary fibrosis  (ISO)
renal cell carcinoma  (ISO)
Rhinosinusitis  (ISO)
seborrheic keratosis  (ISO)
Skin Neoplasms  (IEP)
Spinal Cord Injuries  (ISO)
squamous cell carcinoma  (ISO)
stomach cancer  (ISO)
stomach disease  (ISO)
transitional cell carcinoma  (ISO)
uveitis  (IMP,ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-lariciresinol  (ISO)
(-)-demecolcine  (ISO)
(-)-lariciresinol  (ISO)
(R)-noradrenaline  (EXP)
(S)-nicotine  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1,4-phenylenediamine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
9-cis-retinoic acid  (ISO)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-4-oxoretinoic acid  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
aniline  (ISO)
anthracen-2-amine  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
ATP  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bilirubin IXalpha  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP,ISO)
carbonyl sulfide  (ISO)
carrageenan  (EXP)
chloropicrin  (ISO)
choline  (EXP)
chromium(6+)  (ISO)
cisplatin  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cortisol  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (EXP,ISO)
D-penicillamine  (ISO)
DDT  (ISO)
Deoxycorticosterone acetate  (ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP,ISO)
dieldrin  (ISO)
diethyldithiocarbamic acid  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
eurycomanone  (ISO)
fluoxetine  (ISO)
flurbiprofen  (EXP)
fluticasone  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
graphite  (ISO)
hexachlorobenzene  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
ibuprofen  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoflavones  (ISO)
isoprenaline  (EXP)
ketoconazole  (ISO)
kojic acid  (ISO)
L-ascorbic acid  (ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
lead(II) chloride  (ISO)
levofloxacin  (ISO)
lipopolysaccharide  (EXP,ISO)
lithocholic acid  (EXP)
magnesium atom  (ISO)
mercury dibromide  (ISO)
metacetamol  (EXP)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
miconazole  (ISO)
mifepristone  (ISO)
monosodium L-glutamate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nickel sulfate  (ISO)
nicotine  (ISO)
ochratoxin A  (ISO)
ouabain  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
paclitaxel  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
phosgene  (EXP)
potassium chloride  (ISO)
potassium dichromate  (ISO)
Propiverine  (ISO)
prostaglandin E2  (ISO)
quercetin  (ISO)
quinoline  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP)
rimonabant  (EXP)
rofecoxib  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
simvastatin  (EXP)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
tanespimycin  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
thiophenes  (ISO)
titanium dioxide  (EXP)
torcetrapib  (ISO)
triadimefon  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin cytoskeleton reorganization  (IBA,ISO)
adaptive immune response  (IEA)
alpha-beta T cell differentiation  (IBA,IMP)
arachidonic acid secretion  (IBA,IMP)
cell surface receptor signaling pathway  (IBA,ISO)
cellular response to glucocorticoid stimulus  (IBA,IMP,ISO)
cellular response to hydrogen peroxide  (IBA,ISO)
cellular response to vascular endothelial growth factor stimulus  (IBA,ISO)
DNA duplex unwinding  (IBA,ISO)
endocrine pancreas development  (IBA)
estrous cycle  (IBA)
G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger  (ISO)
gliogenesis  (IBA)
granulocyte chemotaxis  (IBA,ISO)
hepatocyte differentiation  (IBA)
immune system process  (IEA)
inflammatory response  (IBA,IMP)
innate immune response  (IEA)
insulin secretion  (IBA,ISO)
keratinocyte differentiation  (IBA,ISO)
monocyte chemotaxis  (ISO)
myoblast migration involved in skeletal muscle regeneration  (IBA,IDA)
negative regulation of exocytosis  (IBA,ISO)
negative regulation of interleukin-8 production  (ISO)
negative regulation of phospholipase A2 activity  (IBA,ISO)
negative regulation of protein secretion  (ISO)
negative regulation of T-helper 2 cell differentiation  (IBA,ISO)
neutrophil clearance  (IBA,ISO)
neutrophil homeostasis  (IMP,ISO)
peptide cross-linking  (ISO)
phagocytosis  (IMP)
positive regulation of apoptotic process  (ISO)
positive regulation of cell migration involved in sprouting angiogenesis  (IBA,ISO)
positive regulation of G1/S transition of mitotic cell cycle  (IBA,IMP)
positive regulation of interleukin-2 production  (IBA,ISO)
positive regulation of neutrophil apoptotic process  (IBA,IMP)
positive regulation of prostaglandin biosynthetic process  (IBA,ISO)
positive regulation of T cell proliferation  (IBA,ISO)
positive regulation of T-helper 1 cell differentiation  (IBA,ISO)
positive regulation of vesicle fusion  (IBA,ISO)
positive regulation of wound healing  (IBA,ISO)
prolactin secretion  (IBA,ISO)
prostate gland development  (IBA)
regulation of cell population proliferation  (IMP)
regulation of cell shape  (IBA,ISO)
regulation of hormone secretion  (IBA,ISO)
regulation of inflammatory response  (IBA,IMP)
regulation of interleukin-1 production  (IBA,IMP)
regulation of leukocyte migration  (IBA,IMP)
response to corticosteroid  (ISO)
response to drug  (IBA)
response to estradiol  (IBA)
response to glucocorticoid  (ISO)
response to hormone  (ISO)
response to interleukin-1  (IBA)
response to organic cyclic compound  (ISO)
response to peptide hormone  (IBA)
response to X-ray  (IBA)
signal transduction  (IMP)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adipose tissue morphology  (IAGP)
abnormal adipose tissue physiology  (IAGP)
abnormal adrenal gland secretion  (IAGP)
abnormal colon morphology  (IAGP)
abnormal corticotroph morphology  (IAGP)
abnormal cranium morphology  (IAGP)
abnormal fat pad morphology  (IAGP)
abnormal folliculo-stellate cell morphology  (IAGP)
abnormal frontal bone morphology  (IAGP)
abnormal gonadotroph morphology  (IAGP)
abnormal intestinal epithelium morphology  (IAGP)
abnormal lactotroph morphology  (IAGP)
abnormal leukocyte physiology  (IAGP)
abnormal neurocranium morphology  (IAGP)
abnormal palatine bone morphology  (IAGP)
abnormal sagittal suture morphology  (IAGP)
abnormal somatotroph morphology  (IAGP)
abnormal tumor vascularization  (IAGP)
abnormal vascular endothelial cell migration  (IAGP)
abnormal vascular endothelial cell physiology  (IAGP)
decreased corticotroph cell size  (IAGP)
decreased metastatic potential  (IAGP)
decreased sensitivity to induced morbidity/mortality  (IAGP)
decreased tumor growth/size  (IAGP)
decreased vascular endothelial cell proliferation  (IAGP)
delayed wound healing  (IAGP)
ectopic cranial bone  (IAGP)
impaired macrophage phagocytosis  (IAGP)
increased adrenocorticotropin level  (IAGP)
increased bone mineral density  (IAGP)
increased circulating insulin level  (IAGP)
increased inflammatory response  (IAGP)
increased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
increased susceptibility to induced colitis  (IAGP)
thin adrenal cortex  (IAGP)
weight loss  (IAGP)
References

References - curated
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Additional References at PubMed
PMID:1676980   PMID:2522299   PMID:2974946   PMID:7592984   PMID:7698766   PMID:7706559   PMID:7768185   PMID:7774911   PMID:7782070   PMID:7894166   PMID:8013374   PMID:8043949  
PMID:8075499   PMID:8499657   PMID:8587144   PMID:8634333   PMID:8719346   PMID:9107690   PMID:9525630   PMID:9606417   PMID:9624122   PMID:9763662   PMID:9826670   PMID:9924185  
PMID:10349636   PMID:10725249   PMID:10876093   PMID:10922068   PMID:10956639   PMID:11042159   PMID:11076861   PMID:11423996   PMID:11440986   PMID:12475898   PMID:12477932   PMID:12516535  
PMID:12553880   PMID:12560218   PMID:12586783   PMID:14506282   PMID:14967753   PMID:15022342   PMID:15064349   PMID:15169834   PMID:15197108   PMID:15485879   PMID:15489334   PMID:15749912  
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PMID:18469846   PMID:18794802   PMID:18802107   PMID:18827967   PMID:18952200   PMID:19029200   PMID:19095957   PMID:19103997   PMID:19104500   PMID:19208747   PMID:19244132   PMID:19553536  
PMID:19625660   PMID:19805119   PMID:19912648   PMID:20139728   PMID:20405035   PMID:20489160   PMID:20558817   PMID:20578244   PMID:20962261   PMID:21245195   PMID:21267068   PMID:21370880  
PMID:21383699   PMID:21398608   PMID:21565611   PMID:21677750   PMID:21873635   PMID:21957127   PMID:22011168   PMID:22159717   PMID:22493082   PMID:22511458   PMID:22539796   PMID:22562975  
PMID:22673621   PMID:22791338   PMID:22897118   PMID:23038751   PMID:23077482   PMID:23144744   PMID:23222458   PMID:23241962   PMID:23277424   PMID:23277546   PMID:23638088   PMID:23777345  
PMID:24048896   PMID:24187664   PMID:24312665   PMID:24464914   PMID:24648446   PMID:24668763   PMID:24790181   PMID:24997993   PMID:25124533   PMID:25129480   PMID:25184992   PMID:25520364  
PMID:25533809   PMID:25562320   PMID:25616869   PMID:25619792   PMID:25664854   PMID:25795053   PMID:25818588   PMID:26102067   PMID:26386311   PMID:26410627   PMID:26458561   PMID:26470781  
PMID:26606969   PMID:26667898   PMID:26677751   PMID:26803520   PMID:26892496   PMID:26943321   PMID:27012521   PMID:27343762   PMID:27426034   PMID:27435504   PMID:27451051   PMID:27633771  
PMID:27833268   PMID:27995621   PMID:28062503   PMID:28071719   PMID:28289158   PMID:28320709   PMID:28373208   PMID:28378742   PMID:28389361   PMID:28432199   PMID:28489004   PMID:28655761  
PMID:29030970   PMID:29085990   PMID:29101233   PMID:29115663   PMID:29192208   PMID:29213013   PMID:29249464   PMID:29263330   PMID:29781578   PMID:30419240   PMID:30595499   PMID:30623413  
PMID:30650525   PMID:30896112   PMID:30972066   PMID:31040226   PMID:31154815   PMID:31196457   PMID:31303498   PMID:31398292   PMID:31645615   PMID:31738896   PMID:31908042   PMID:32015229  
PMID:32107769   PMID:32325033   PMID:32497150   PMID:32552056   PMID:32758484   PMID:33333231  


Genomics

Comparative Map Data
Anxa1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391920,350,798 - 20,368,035 (-)NCBIGRCm39mm39
GRCm381920,373,434 - 20,390,671 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1920,373,428 - 20,390,944 (-)EnsemblGRCm38mm10GRCm38
MGSCv371920,447,924 - 20,465,161 (-)NCBIGRCm37mm9NCBIm37
MGSCv361920,440,455 - 20,457,696 (-)NCBImm8
Celera1921,098,423 - 21,115,607 (-)NCBICelera
Cytogenetic Map19BNCBI
cM Map1913.83NCBI
ANXA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl973,151,865 - 73,170,393 (+)EnsemblGRCh38hg38GRCh38
GRCh38973,151,865 - 73,170,393 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37975,766,781 - 75,785,309 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37975,766,721 - 75,785,309 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36974,956,601 - 74,975,127 (+)NCBINCBI36hg18NCBI36
Build 34972,996,334 - 73,014,861NCBI
Celera946,339,417 - 46,357,944 (+)NCBI
Cytogenetic Map9q21.13ENTREZGENE
HuRef945,589,147 - 45,607,684 (+)NCBIHuRef
CHM1_1975,913,496 - 75,932,176 (+)NCBICHM1_1
Anxa1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21217,861,175 - 217,877,205 (-)NCBI
Rnor_6.0 Ensembl1237,893,966 - 237,910,012 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01237,893,983 - 237,910,002 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01245,192,875 - 245,220,057 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41223,478,436 - 223,494,455 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11223,642,460 - 223,658,478 (-)NCBI
Celera1215,138,950 - 215,154,969 (-)NCBICelera
Cytogenetic Map1q51NCBI
Anxa1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555125,686,508 - 5,703,645 (-)NCBIChiLan1.0ChiLan1.0
ANXA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1971,930,148 - 71,948,779 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl971,929,728 - 71,948,779 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0951,647,404 - 51,665,990 (-)NCBIMhudiblu_PPA_v0panPan3
ANXA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl184,744,163 - 84,763,011 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1184,744,159 - 84,763,011 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Anxa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365039,124,314 - 9,142,372 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1226,414,307 - 226,432,287 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11226,414,200 - 226,431,963 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,989,694 - 253,007,485 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11284,207,818 - 84,226,438 (+)NCBI
ChlSab1.1 Ensembl1284,207,820 - 84,226,562 (+)Ensembl
Anxa1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624811765,338 - 782,203 (+)NCBI

Position Markers
RH129631  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Celera1921,098,458 - 21,098,643UniSTS
Cytogenetic Map19BUniSTS
cM Map1918.0UniSTS
Anxa1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381920,383,822 - 20,384,758UniSTSGRCm38
MGSCv371920,458,312 - 20,459,248UniSTSGRCm37
Celera1921,108,757 - 21,109,693UniSTS
Cytogenetic Map19BUniSTS
cM Map1918.0UniSTS
cM Map1918.0UniSTS
cM Map1918.0UniSTS
Anxa1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381920,390,955 - 20,391,246UniSTSGRCm38
MGSCv371920,465,445 - 20,465,736UniSTSGRCm37
Celera1921,115,891 - 21,116,080UniSTS
Cytogenetic Map19BUniSTS
cM Map1918.0UniSTS
Anxa1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381920,373,488 - 20,373,643UniSTSGRCm38
MGSCv371920,447,978 - 20,448,133UniSTSGRCm37
Celera1921,098,477 - 21,098,632UniSTS
Cytogenetic Map19BUniSTS
cM Map1918.0UniSTS
Anxa1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381920,373,692 - 20,373,768UniSTSGRCm38
MGSCv371920,448,182 - 20,448,258UniSTSGRCm37
Cytogenetic Map19BUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120645286Mouse
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122321310Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132362870Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132897810Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19167640035676563Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19320000035900000Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19327855120562299Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19334585237345984Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19334585237345984Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19334585237345984Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19334585237345984Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19533596239336106Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19932831543328421Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19981005343810202Mouse
14928311Manh85_mmandible shape 85 (mouse)191193738945937389Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191494561648945738Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191593520749935319Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191593520749935319Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191831776252317981Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191831776252317981Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192025691554257062Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192025691554257062Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir196a-1mmu-miR-196a-5pOncomiRDBexternal_infoNANA18663355
Mir196a-2mmu-miR-196a-5pOncomiRDBexternal_infoNANA18663355

Predicted Target Of
Summary Value
Count of predictions:507
Count of miRNA genes:257
Interacting mature miRNAs:290
Transcripts:ENSMUST00000025561, ENSMUST00000163902, ENSMUST00000164587, ENSMUST00000165518, ENSMUST00000167668, ENSMUST00000168020, ENSMUST00000171423
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH001995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU684130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M24554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X07486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000025561   ⟹   ENSMUSP00000025561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,373,428 - 20,390,944 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163902
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,373,556 - 20,375,587 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164587
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,379,659 - 20,390,651 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165518
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,377,680 - 20,380,021 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167668
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,377,680 - 20,378,589 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168020
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,378,118 - 20,382,125 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171423   ⟹   ENSMUSP00000158429
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,373,430 - 20,390,761 (-)Ensembl
RefSeq Acc Id: ENSMUST00000235280   ⟹   ENSMUSP00000158305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1920,373,428 - 20,390,673 (-)Ensembl
RefSeq Acc Id: NM_010730   ⟹   NP_034860
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391920,350,798 - 20,368,035 (-)NCBI
GRCm381920,373,434 - 20,390,671 (-)ENTREZGENE
MGSCv371920,447,924 - 20,465,161 (-)RGD
Celera1921,098,423 - 21,115,607 (-)RGD
cM Map19 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034860   ⟸   NM_010730
- UniProtKB: P10107 (UniProtKB/Swiss-Prot),   Q4FJV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000158429   ⟸   ENSMUST00000171423
RefSeq Acc Id: ENSMUSP00000025561   ⟸   ENSMUST00000025561
RefSeq Acc Id: ENSMUSP00000158305   ⟸   ENSMUST00000235280

Promoters
RGD ID:13679080
Promoter ID:EPDNEW_M23689
Type:initiation region
Name:Anxa1_1
Description:Mus musculus annexin A1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381920,390,672 - 20,390,732EPDNEW
RGD ID:6829836
Promoter ID:MM_KWN:26622
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000025561,   ENSMUST00000099584,   UC008GYJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361920,462,926 - 20,465,177 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96819 AgrOrtholog
Ensembl Genes ENSMUSG00000024659 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000025561 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000158305 UniProtKB/Swiss-Prot
  ENSMUSP00000158429 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000025561 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000171423 UniProtKB/TrEMBL
  ENSMUST00000235280 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.220.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANX1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16952 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96819 ENTREZGENE
NCBI Gene 16952 ENTREZGENE
PANTHER PTHR10502:SF17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Anxa1 PhenoGen
PRINTS ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXINI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A494BBD8_MOUSE UniProtKB/TrEMBL
  ANXA1_MOUSE UniProtKB/Swiss-Prot
  B7STB7_MOUSE UniProtKB/TrEMBL
  P10107 ENTREZGENE
  Q3U5N9_MOUSE UniProtKB/TrEMBL
  Q3US43_MOUSE UniProtKB/TrEMBL
  Q4FJV4 ENTREZGENE, UniProtKB/TrEMBL
  Q4FK88_MOUSE UniProtKB/TrEMBL