Acp5 (acid phosphatase 5, tartrate resistant) - Rat Genome Database

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Gene: Acp5 (acid phosphatase 5, tartrate resistant) Mus musculus
Analyze
Symbol: Acp5
Name: acid phosphatase 5, tartrate resistant
RGD ID: 10072
MGI Page MGI
Description: Enables acid phosphatase activity. Acts upstream of or within several processes, including bone resorption; negative regulation of cytokine production; and response to bacterium. Located in lysosome. Is expressed in several structures, including alimentary system; limb; liver; skeleton; and skin. Human ortholog(s) of this gene implicated in spondylometaphyseal dysplasia. Orthologous to human ACP5 (acid phosphatase 5, tartrate resistant).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: acid phosphatase type V; T; tartrate-resistant acid ATPase; tartrate-resistant acid phosphatase type 5; TR; TR-AP; TRACP; TRAP; trATPase; type 5 acid phosphatase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39922,038,023 - 22,047,042 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl922,038,023 - 22,047,007 (-)EnsemblGRCm39 Ensembl
GRCm38922,126,727 - 22,135,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl922,126,727 - 22,135,711 (-)EnsemblGRCm38mm10GRCm38
MGSCv37921,931,171 - 21,940,190 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36921,877,148 - 21,881,056 (-)NCBIMGSCv36mm8
Celera919,395,697 - 19,404,716 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map98.38NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-matairesinol  (EXP)
(20S)-ginsenoside Rg3  (ISO)
1,2,4-trimethylbenzene  (ISO)
1,4-dichlorobenzene  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-aminopurine  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-amino-5-chloro-N-[1-[3-(4-fluorophenoxy)propyl]-3-methoxy-4-piperidinyl]-2-methoxybenzamide  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
alendronic acid  (ISO)
all-trans-retinoic acid  (EXP)
aluminium oxide  (ISO)
amitrole  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
aristolochic acid A  (ISO)
azadirachtin A  (EXP)
beclomethasone  (ISO)
belinostat  (ISO)
benzamide  (EXP)
benzo[a]pyrene  (EXP,ISO)
Bergenin  (EXP)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chloroprene  (ISO)
chlorpromazine  (EXP)
chlorpyrifos  (EXP)
chromium atom  (ISO)
cisapride  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
copper(II) sulfate  (ISO)
crocin-1  (EXP)
cyclosporin A  (EXP,ISO)
Cyclosporin H  (EXP)
desferrioxamine B  (EXP)
dexamethasone  (EXP,ISO)
diethylstilbestrol  (EXP)
diosgenin  (EXP)
diosmetin  (EXP)
dioxygen  (ISO)
dithionite(2-)  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ellagic acid  (EXP)
entinostat  (ISO)
ethanol  (EXP)
ferric ammonium citrate  (ISO)
fluoxetine  (EXP)
formononetin  (EXP)
furan  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
guanethidine  (ISO)
Heptachlor epoxide  (EXP)
indometacin  (ISO)
iron dichloride  (ISO)
ivermectin  (ISO)
KN-93  (EXP)
linsidomine  (ISO)
lipopolysaccharide  (EXP)
manganese(II) chloride  (ISO)
mangiferin  (EXP)
Maxacalcitol  (ISO)
methimazole  (ISO)
methylglyoxal  (EXP,ISO)
microcystin-LR  (ISO)
modafinil  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
Morroniside  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
naringin  (EXP)
niclosamide  (EXP,ISO)
nitric acid  (ISO)
nitrofen  (ISO)
NMN zwitterion  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP)
phenethyl caffeate  (ISO)
poly(ethylene)  (ISO)
poly(methyl methacrylate) macromolecule  (EXP)
potassium dichromate  (ISO)
propiconazole  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (EXP,ISO)
sclareol  (EXP)
silibinin  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
Soman  (ISO)
stevioside  (ISO)
streptozocin  (EXP)
succimer  (EXP)
sulfadimethoxine  (ISO)
sulforaphane  (EXP)
tacrolimus hydrate  (EXP)
telmisartan  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thalidomide  (ISO)
theophylline  (ISO)
thioacetamide  (ISO)
thymol  (EXP)
thymol sulfate(1-)  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
tungsten  (EXP)
uranium atom  (ISO)
valproic acid  (EXP,ISO)
venlafaxine hydrochloride  (ISO)
vitamin D  (EXP)
zinc atom  (ISO)
zinc sulfate  (EXP)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
extracellular space  (ISO)
lysosome  (IDA,IMP)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Telmisartan Prevents Alveolar Bone Loss by Decreasing the Expression of Osteoclasts Markers in Hypertensive Rats With Periodontal Disease. Brito VGB, etal., Front Pharmacol. 2020 Nov 11;11:579926. doi: 10.3389/fphar.2020.579926. eCollection 2020.
2. Curcumin suppresses increased bone resorption by inhibiting osteoclastogenesis in rats with streptozotocin-induced diabetes. Hie M, etal., Eur J Pharmacol. 2009 Oct 25;621(1-3):1-9. Epub 2009 Aug 21.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. MGD IEA MGD IEA
7. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
8. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
11. Evidence-based assessment of antiosteoporotic activity of petroleum-ether extract of Cissus quadrangularis Linn. on ovariectomy-induced osteoporosis. Potu BK, etal., Ups J Med Sci. 2009;114(3):140-8.
12. Mouse MP Annotation Import Pipeline RGD automated import pipeline
13. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Microdamage Repair and Remodeling Requires Mechanical Loading. Waldorff EI, etal., J Bone Miner Res. 2009 Oct 12.
Additional References at PubMed
PMID:7654474   PMID:8200916   PMID:8256664   PMID:8359686   PMID:8449511   PMID:8456115   PMID:8898228   PMID:9308894   PMID:9421432   PMID:9430236   PMID:10349636   PMID:10467942  
PMID:10646119   PMID:10853965   PMID:10861287   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11168643   PMID:11731469   PMID:12243748   PMID:12477932   PMID:12663664   PMID:12706893  
PMID:12756187   PMID:14584903   PMID:14610273   PMID:14617570   PMID:14681479   PMID:14962802   PMID:15033168   PMID:15081357   PMID:15489334   PMID:15563592   PMID:15563837   PMID:15590658  
PMID:15619674   PMID:15845367   PMID:15862156   PMID:15866164   PMID:15936336   PMID:15975830   PMID:16141072   PMID:16141073   PMID:16475168   PMID:16750176   PMID:16815385   PMID:16829211  
PMID:16939395   PMID:17014841   PMID:17544391   PMID:17548469   PMID:17551769   PMID:18021007   PMID:18025304   PMID:18056037   PMID:18297083   PMID:18320034   PMID:18458345   PMID:18554416  
PMID:18799693   PMID:18927151   PMID:18940929   PMID:19197242   PMID:19419310   PMID:19653325   PMID:19801646   PMID:20142103   PMID:20440000   PMID:20721934   PMID:20814988   PMID:21267068  
PMID:21571217   PMID:21873635   PMID:22158965   PMID:22174188   PMID:22206865   PMID:22290230   PMID:22579636   PMID:23132945   PMID:23321670   PMID:23444125   PMID:23567158   PMID:23603074  
PMID:23990468   PMID:24275439   PMID:24788917   PMID:24992711   PMID:25093463   PMID:25340332   PMID:25450682   PMID:25736226   PMID:27273006   PMID:27467521   PMID:27621061   PMID:27930311  
PMID:29174564   PMID:30075049   PMID:30684382   PMID:31202927   PMID:31360740   PMID:32186512   PMID:32220331   PMID:32792620   PMID:34595178   PMID:35651944   PMID:36569898   PMID:36726200  
PMID:37704707   PMID:37715952  


Genomics

Comparative Map Data
Acp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39922,038,023 - 22,047,042 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl922,038,023 - 22,047,007 (-)EnsemblGRCm39 Ensembl
GRCm38922,126,727 - 22,135,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl922,126,727 - 22,135,711 (-)EnsemblGRCm38mm10GRCm38
MGSCv37921,931,171 - 21,940,190 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36921,877,148 - 21,881,056 (-)NCBIMGSCv36mm8
Celera919,395,697 - 19,404,716 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map98.38NCBI
ACP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381911,574,660 - 11,578,975 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1911,574,653 - 11,579,993 (-)EnsemblGRCh38hg38GRCh38
GRCh371911,685,475 - 11,689,790 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361911,546,477 - 11,549,496 (-)NCBINCBI36Build 36hg18NCBI36
Build 341911,546,476 - 11,549,496NCBI
Celera1911,580,213 - 11,584,539 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef1911,259,840 - 11,264,071 (-)NCBIHuRef
CHM1_11911,685,335 - 11,689,664 (-)NCBICHM1_1
T2T-CHM13v2.01911,702,190 - 11,706,505 (-)NCBIT2T-CHM13v2.0
Acp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8828,939,984 - 28,946,639 (-)NCBIGRCr8
mRatBN7.2820,663,984 - 20,670,604 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl820,663,985 - 20,667,929 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx824,693,289 - 24,698,588 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0822,990,432 - 22,995,731 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0820,893,525 - 20,899,471 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0823,142,733 - 23,149,067 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl823,142,734 - 23,148,396 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0823,197,095 - 23,202,903 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera822,052,728 - 22,058,674 (-)NCBICelera
Cytogenetic Map8q13NCBI
Acp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554952,418,364 - 2,421,538 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554952,418,113 - 2,421,181 (+)NCBIChiLan1.0ChiLan1.0
ACP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22016,486,997 - 16,495,640 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11915,482,421 - 15,489,613 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01911,120,451 - 11,125,167 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11911,832,575 - 11,836,881 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1911,832,575 - 11,835,203 (-)Ensemblpanpan1.1panPan2
ACP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,812,444 - 49,816,262 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,814,032 - 49,816,260 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2049,684,989 - 49,687,385 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02050,330,836 - 50,334,545 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2050,332,449 - 50,334,544 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12049,542,471 - 49,544,878 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,968,636 - 49,971,025 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02050,211,593 - 50,213,981 (+)NCBIUU_Cfam_GSD_1.0
Acp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,712,098 - 208,756,454 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366591,598,177 - 1,600,262 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366591,598,252 - 1,642,615 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl270,206,162 - 70,208,229 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1270,206,159 - 70,209,855 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2270,615,520 - 70,616,019 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap2q12-q21NCBI
ACP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1610,488,572 - 10,493,508 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl610,488,460 - 10,491,519 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660749,350,068 - 9,354,653 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acp5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248283,307,635 - 3,310,547 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248283,305,913 - 3,309,983 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Acp5
305 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:477
Count of miRNA genes:152
Interacting mature miRNAs:178
Transcripts:ENSMUST00000069330, ENSMUST00000115315, ENSMUST00000165735
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902913Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130341840Mouse
35673312Ari7_mantibody response to influenza 7, day 45, IgG3 (mouse)9780000122211296Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse

Markers in Region
D9Mit83  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38922,130,293 - 22,130,424UniSTSGRCm38
MGSCv37921,934,737 - 21,934,868UniSTSGRCm37
Celera919,399,263 - 19,399,394UniSTS
Cytogenetic Map9A3UniSTS
cM Map96.0UniSTS
Whitehead Genetic94.4UniSTS
Whitehead_YAC9 UniSTS
M99054  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38922,126,840 - 22,126,924UniSTSGRCm38
MGSCv37921,931,284 - 21,931,368UniSTSGRCm37
Celera919,395,810 - 19,395,894UniSTS
Cytogenetic Map9A3UniSTS
cM Map96.0UniSTS
Whitehead/MRC_RH9255.57UniSTS
Acp5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37921,935,005 - 21,935,101UniSTSGRCm37
MGSCv37921,932,137 - 21,932,462UniSTSGRCm37
Celera919,396,663 - 19,396,988UniSTS
Celera919,399,531 - 19,399,627UniSTS
Cytogenetic Map9A3UniSTS
cM Map96.0UniSTS
Acp5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38922,130,561 - 22,130,657UniSTSGRCm38
MGSCv37921,935,005 - 21,935,101UniSTSGRCm37
Celera919,399,531 - 19,399,627UniSTS
Cytogenetic Map9A3UniSTS
ACP5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38922,127,693 - 22,128,018UniSTSGRCm38
MGSCv37921,932,137 - 21,932,462UniSTSGRCm37
Celera919,396,663 - 19,396,988UniSTS
Cytogenetic Map9A3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001102404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001102405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY187311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG076865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ031772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY084869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY107232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ023444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M85212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M99054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S70805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000069330   ⟹   ENSMUSP00000065425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,038,023 - 22,043,111 (-)Ensembl
GRCm38.p6 Ensembl922,126,727 - 22,131,815 (-)Ensembl
RefSeq Acc Id: ENSMUST00000115315   ⟹   ENSMUSP00000110970
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,038,027 - 22,041,894 (-)Ensembl
GRCm38.p6 Ensembl922,126,731 - 22,130,598 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165735   ⟹   ENSMUSP00000127128
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,038,023 - 22,047,007 (-)Ensembl
GRCm38.p6 Ensembl922,126,727 - 22,135,711 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213815   ⟹   ENSMUSP00000149597
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,038,034 - 22,042,949 (-)Ensembl
GRCm38.p6 Ensembl922,126,738 - 22,131,653 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216684
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,043,916 - 22,046,987 (-)Ensembl
GRCm38.p6 Ensembl922,132,620 - 22,135,691 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217643   ⟹   ENSMUSP00000150903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl922,038,034 - 22,043,127 (-)Ensembl
GRCm38.p6 Ensembl922,126,738 - 22,131,831 (-)Ensembl
RefSeq Acc Id: NM_001102404   ⟹   NP_001095874
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,043,161 (-)NCBI
GRCm38922,126,727 - 22,131,865 (-)NCBI
MGSCv37921,931,171 - 21,940,190 (-)RGD
Celera919,395,697 - 19,404,716 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001102405   ⟹   NP_001095875
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,047,042 (-)NCBI
GRCm38922,126,727 - 22,135,746 (-)ENTREZGENE
MGSCv37921,931,171 - 21,940,190 (-)RGD
Celera919,395,697 - 19,404,716 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_007388   ⟹   NP_031414
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,041,894 (-)NCBI
GRCm38922,126,727 - 22,130,598 (-)NCBI
MGSCv37921,931,171 - 21,940,190 (-)RGD
Celera919,395,697 - 19,404,716 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509944   ⟹   XP_006510007
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,046,982 (-)NCBI
GRCm38922,126,727 - 22,135,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509945   ⟹   XP_006510008
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,042,976 (-)NCBI
GRCm38922,126,727 - 22,131,680 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509946   ⟹   XP_006510009
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,042,934 (-)NCBI
GRCm38922,126,727 - 22,131,654 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242384   ⟹   XP_011240686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39922,038,023 - 22,046,982 (-)NCBI
GRCm38922,126,727 - 22,135,686 (-)NCBI
Sequence:
RefSeq Acc Id: NP_031414   ⟸   NM_007388
- Peptide Label: precursor
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001095875   ⟸   NM_001102405
- Peptide Label: precursor
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001095874   ⟸   NM_001102404
- Peptide Label: precursor
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510007   ⟸   XM_006509944
- Peptide Label: isoform X1
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510008   ⟸   XM_006509945
- Peptide Label: isoform X1
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510009   ⟸   XM_006509946
- Peptide Label: isoform X1
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011240686   ⟸   XM_011242384
- Peptide Label: isoform X1
- UniProtKB: Q05117 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000150903   ⟸   ENSMUST00000217643
RefSeq Acc Id: ENSMUSP00000127128   ⟸   ENSMUST00000165735
RefSeq Acc Id: ENSMUSP00000149597   ⟸   ENSMUST00000213815
RefSeq Acc Id: ENSMUSP00000110970   ⟸   ENSMUST00000115315
RefSeq Acc Id: ENSMUSP00000065425   ⟸   ENSMUST00000069330

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q05117-F1-model_v2 AlphaFold Q05117 1-327 view protein structure

Promoters
RGD ID:6844064
Promoter ID:MM_KWN:56613
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:ENSMUST00000115315
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36921,935,809 - 21,936,309 (-)MPROMDB
RGD ID:6844066
Promoter ID:MM_KWN:56614
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Spleen
Transcripts:NM_001102404
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36921,935,956 - 21,936,456 (-)MPROMDB
RGD ID:8669018
Promoter ID:EPDNEW_M12539
Type:initiation region
Name:Acp5_1
Description:Mus musculus acid phosphatase 5, tartrate resistant , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12540  EPDNEW_M12541  EPDNEW_M12542  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38922,130,574 - 22,130,634EPDNEW
RGD ID:8669020
Promoter ID:EPDNEW_M12540
Type:initiation region
Name:Acp5_4
Description:Mus musculus acid phosphatase 5, tartrate resistant , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12539  EPDNEW_M12541  EPDNEW_M12542  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38922,131,649 - 22,131,709EPDNEW
RGD ID:8669022
Promoter ID:EPDNEW_M12541
Type:initiation region
Name:Acp5_2
Description:Mus musculus acid phosphatase 5, tartrate resistant , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12539  EPDNEW_M12540  EPDNEW_M12542  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38922,131,866 - 22,131,926EPDNEW
RGD ID:8669024
Promoter ID:EPDNEW_M12542
Type:multiple initiation site
Name:Acp5_3
Description:Mus musculus acid phosphatase 5, tartrate resistant , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M12539  EPDNEW_M12540  EPDNEW_M12541  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38922,135,776 - 22,135,836EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:87883 AgrOrtholog
Ensembl Genes ENSMUSG00000001348 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000069330 ENTREZGENE
  ENSMUST00000069330.14 UniProtKB/Swiss-Prot
  ENSMUST00000115315 ENTREZGENE
  ENSMUST00000115315.3 UniProtKB/Swiss-Prot
  ENSMUST00000165735 ENTREZGENE
  ENSMUST00000165735.9 UniProtKB/Swiss-Prot
  ENSMUST00000213815 ENTREZGENE
  ENSMUST00000213815.2 UniProtKB/Swiss-Prot
  ENSMUST00000217643.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.60.21.10 UniProtKB/Swiss-Prot
InterPro Acid_PPase UniProtKB/Swiss-Prot
  Calcineurin-like_PHP_ApaH UniProtKB/Swiss-Prot
  Metallo-depent_PP-like UniProtKB/Swiss-Prot
KEGG Report mmu:11433 UniProtKB/Swiss-Prot
MGD MGI:87883 ENTREZGENE
NCBI Gene 11433 ENTREZGENE
PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 UniProtKB/Swiss-Prot
  TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 UniProtKB/Swiss-Prot
Pfam Metallophos UniProtKB/Swiss-Prot
PhenoGen Acp5 PhenoGen
PIRSF Acid_Ptase_5 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56300 UniProtKB/Swiss-Prot
UniProt PPA5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE