MNX1-AS2 (MNX1 antisense RNA 2) - Rat Genome Database

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Gene: MNX1-AS2 (MNX1 antisense RNA 2) Homo sapiens
Analyze
Symbol: MNX1-AS2
Name: MNX1 antisense RNA 2
RGD ID: 10054337
HGNC Page HGNC:40278
Description: ASSOCIATED WITH Autism; autistic disorder; Currarino syndrome
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387157,006,307 - 157,007,120 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7157,006,307 - 157,007,132 (+)EnsemblGRCh38hg38GRCh38
GRCh377156,799,001 - 156,799,814 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map7q36.3NCBI
CHM1_17156,807,177 - 156,808,434 (+)NCBICHM1_1
T2T-CHM13v2.07158,194,042 - 158,194,855 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Autism  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
Additional References at PubMed
PMID:27816668  


Genomics

Variants

.
Variants in MNX1-AS2
25 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_005515.4(MNX1):c.775C>T (p.Gln259Ter) single nucleotide variant Currarino triad [RCV000015976] Chr7:157006556 [GRCh38]
Chr7:156799250 [GRCh37]
Chr7:7q36.3		 pathogenic
NM_005515.4(MNX1):c.736A>T (p.Thr246Ser) single nucleotide variant Currarino triad [RCV000015982] Chr7:157006595 [GRCh38]
Chr7:156799289 [GRCh37]
Chr7:7q36.3		 pathogenic
NM_005515.4(MNX1):c.844G>T (p.Glu282Ter) single nucleotide variant Currarino triad [RCV000015984] Chr7:157006487 [GRCh38]
Chr7:156799181 [GRCh37]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:155007022-159135526)x1 copy number loss See cases [RCV000050856] Chr7:155007022..159135526 [GRCh38]
Chr7:154798732..158928217 [GRCh37]
Chr7:154429665..158620978 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q32.1-36.3(chr7:129310166-159282390)x3 copy number gain See cases [RCV000050876] Chr7:129310166..159282390 [GRCh38]
Chr7:128950007..159075079 [GRCh37]
Chr7:128737243..158767840 [NCBI36]
Chr7:7q32.1-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132850196-159325876)x3 copy number gain See cases [RCV000051101] Chr7:132850196..159325876 [GRCh38]
Chr7:132534956..159118566 [GRCh37]
Chr7:132185496..158811327 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:147250465-159325876)x1 copy number loss See cases [RCV000051108] Chr7:147250465..159325876 [GRCh38]
Chr7:146947557..159118566 [GRCh37]
Chr7:146578490..158811327 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q33-36.3(chr7:136309982-159307523)x3 copy number gain See cases [RCV000053576] Chr7:136309982..159307523 [GRCh38]
Chr7:135994730..159100212 [GRCh37]
Chr7:135645270..158792973 [NCBI36]
Chr7:7q33-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:142021716-159325876)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053577]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053577]|See cases [RCV000053577] Chr7:142021716..159325876 [GRCh38]
Chr7:142528609..159118566 [GRCh37]
Chr7:141367985..158811327 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:139365967-159282531)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054175]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054175]|See cases [RCV000054175] Chr7:139365967..159282531 [GRCh38]
Chr7:139050713..159075220 [GRCh37]
Chr7:138701253..158767981 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:140754198-159307523)x1 copy number loss See cases [RCV000054176] Chr7:140754198..159307523 [GRCh38]
Chr7:140453998..159100212 [GRCh37]
Chr7:140100467..158792973 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:142358524-159282531)x1 copy number loss See cases [RCV000054177] Chr7:142358524..159282531 [GRCh38]
Chr7:142528609..159075220 [GRCh37]
Chr7:141726947..158767981 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:143884559-159282390)x1 copy number loss See cases [RCV000054178] Chr7:143884559..159282390 [GRCh38]
Chr7:143581652..159075079 [GRCh37]
Chr7:143212585..158767840 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:145699944-159296617)x1 copy number loss See cases [RCV000054188] Chr7:145699944..159296617 [GRCh38]
Chr7:145397037..159089306 [GRCh37]
Chr7:145027970..158782067 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:152332476-159296617)x1 copy number loss See cases [RCV000054190] Chr7:152332476..159296617 [GRCh38]
Chr7:152029561..159089306 [GRCh37]
Chr7:151660494..158782067 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:152918472-159307523)x1 copy number loss See cases [RCV000054191] Chr7:152918472..159307523 [GRCh38]
Chr7:152615557..159100212 [GRCh37]
Chr7:152246490..158792973 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:152920128-159332714)x1 copy number loss See cases [RCV000054192] Chr7:152920128..159332714 [GRCh38]
Chr7:152617213..159125404 [GRCh37]
Chr7:152248146..158818165 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:153833092-159282531)x1 copy number loss See cases [RCV000054193] Chr7:153833092..159282531 [GRCh38]
Chr7:153530177..159075220 [GRCh37]
Chr7:153161110..158767981 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:156544324-159325876)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054194]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000054194]|See cases [RCV000054194] Chr7:156544324..159325876 [GRCh38]
Chr7:156337018..159118566 [GRCh37]
Chr7:156029779..158811327 [NCBI36]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:155501171-159325876)x1 copy number loss See cases [RCV000135662] Chr7:155501171..159325876 [GRCh38]
Chr7:155293866..159118566 [GRCh37]
Chr7:154986627..158811327 [NCBI36]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:153908499-159325876)x1 copy number loss See cases [RCV000135826] Chr7:153908499..159325876 [GRCh38]
Chr7:153605584..159118566 [GRCh37]
Chr7:153236517..158811327 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:156994164-157006848)x3 copy number gain See cases [RCV000136024] Chr7:156994164..157006848 [GRCh38]
Chr7:156786858..156799542 [GRCh37]
Chr7:156479619..156492303 [NCBI36]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:150486071-159335865)x1 copy number loss See cases [RCV000136089] Chr7:150486071..159335865 [GRCh38]
Chr7:150183159..159128555 [GRCh37]
Chr7:149814092..158821316 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:151378879-158923762)x1 copy number loss See cases [RCV000136125] Chr7:151378879..158923762 [GRCh38]
Chr7:151075965..158716453 [GRCh37]
Chr7:150706898..158409214 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic|benign
GRCh38/hg38 7q36.2-36.3(chr7:152860576-159325876)x1 copy number loss See cases [RCV000136143] Chr7:152860576..159325876 [GRCh38]
Chr7:152557661..159118566 [GRCh37]
Chr7:152188594..158811327 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:154939710-159325876)x1 copy number loss See cases [RCV000136593] Chr7:154939710..159325876 [GRCh38]
Chr7:154731420..159118566 [GRCh37]
Chr7:154362353..158811327 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:151104277-159325876)x3 copy number gain See cases [RCV000136683] Chr7:151104277..159325876 [GRCh38]
Chr7:150801364..159118566 [GRCh37]
Chr7:150432297..158811327 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q21.3-36.3(chr7:97419852-158923762)x3 copy number gain See cases [RCV000136717] Chr7:97419852..158923762 [GRCh38]
Chr7:97049164..158716453 [GRCh37]
Chr7:96887100..158409214 [NCBI36]
Chr7:7q21.3-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:152807205-159325876)x1 copy number loss See cases [RCV000136940] Chr7:152807205..159325876 [GRCh38]
Chr7:152504290..159118566 [GRCh37]
Chr7:152135223..158811327 [NCBI36]
Chr7:7q36.2-36.3		 pathogenic
GRCh38/hg38 7q34-36.3(chr7:141960861-159335866)x1 copy number loss See cases [RCV000137256] Chr7:141960861..159335866 [GRCh38]
Chr7:142528609..159128556 [GRCh37]
Chr7:141307130..158821317 [NCBI36]
Chr7:7q34-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:145436544-159331441)x1 copy number loss See cases [RCV000137338] Chr7:145436544..159331441 [GRCh38]
Chr7:145133637..159124131 [GRCh37]
Chr7:144764570..158816892 [NCBI36]
Chr7:7q35-36.3		 pathogenic|likely pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:150802801-159335866)x1 copy number loss See cases [RCV000137465] Chr7:150802801..159335866 [GRCh38]
Chr7:150499889..159128556 [GRCh37]
Chr7:150130822..158821317 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:146047157-157522158)x1 copy number loss See cases [RCV000137781] Chr7:146047157..157522158 [GRCh38]
Chr7:145744250..157314852 [GRCh37]
Chr7:145375183..157007613 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:145250254-159335866)x1 copy number loss See cases [RCV000138005] Chr7:145250254..159335866 [GRCh38]
Chr7:144947347..159128556 [GRCh37]
Chr7:144578280..158821317 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q33-36.3(chr7:134666829-158591882)x1 copy number loss See cases [RCV000138120] Chr7:134666829..158591882 [GRCh38]
Chr7:134351581..158384574 [GRCh37]
Chr7:134002121..158077335 [NCBI36]
Chr7:7q33-36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:155379296-159335866)x3 copy number gain See cases [RCV000138167] Chr7:155379296..159335866 [GRCh38]
Chr7:155171991..159128556 [GRCh37]
Chr7:154864752..158821317 [NCBI36]
Chr7:7q36.3		 likely pathogenic
GRCh38/hg38 7q31.32-36.3(chr7:121863759-159335865)x3 copy number gain See cases [RCV000138847] Chr7:121863759..159335865 [GRCh38]
Chr7:121503813..159128555 [GRCh37]
Chr7:121291049..158821316 [NCBI36]
Chr7:7q31.32-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132444095-159335866)x3 copy number gain See cases [RCV000139654] Chr7:132444095..159335866 [GRCh38]
Chr7:132128854..159128556 [GRCh37]
Chr7:131779394..158821317 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:152428852-159335865)x3 copy number gain See cases [RCV000139725] Chr7:152428852..159335865 [GRCh38]
Chr7:152125937..159128555 [GRCh37]
Chr7:151756870..158821316 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:155574967-159335866)x1 copy number loss See cases [RCV000141247] Chr7:155574967..159335866 [GRCh38]
Chr7:155367662..159128556 [GRCh37]
Chr7:155060423..158821317 [NCBI36]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7q31.2-36.3(chr7:115459015-159325817)x3 copy number gain See cases [RCV000141413] Chr7:115459015..159325817 [GRCh38]
Chr7:115099069..159118507 [GRCh37]
Chr7:114886305..158811268 [NCBI36]
Chr7:7q31.2-36.3		 pathogenic
GRCh38/hg38 7q36.1-36.3(chr7:150260297-159325876)x1 copy number loss See cases [RCV000142592] Chr7:150260297..159325876 [GRCh38]
Chr7:149957386..159118566 [GRCh37]
Chr7:149588319..158811327 [NCBI36]
Chr7:7q36.1-36.3		 pathogenic
GRCh38/hg38 7q36.3(chr7:155262313-159117047)x1 copy number loss See cases [RCV000142635] Chr7:155262313..159117047 [GRCh38]
Chr7:155054023..158909738 [GRCh37]
Chr7:154684956..158602499 [NCBI36]
Chr7:7q36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:131228764-159335866)x3 copy number gain See cases [RCV000142802] Chr7:131228764..159335866 [GRCh38]
Chr7:130913523..159128556 [GRCh37]
Chr7:130564063..158821317 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q35-36.3(chr7:147144002-159327017)x1 copy number loss See cases [RCV000143503] Chr7:147144002..159327017 [GRCh38]
Chr7:146841094..159119707 [GRCh37]
Chr7:146472027..158812468 [NCBI36]
Chr7:7q35-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:132438072-159327017)x3 copy number gain See cases [RCV000143707] Chr7:132438072..159327017 [GRCh38]
Chr7:132122831..159119707 [GRCh37]
Chr7:131773371..158812468 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
GRCh38/hg38 7q32.3-36.3(chr7:131171478-159327017)x3 copy number gain See cases [RCV000143754] Chr7:131171478..159327017 [GRCh38]
Chr7:130856237..159119707 [GRCh37]
Chr7:130506777..158812468 [NCBI36]
Chr7:7q32.3-36.3		 pathogenic
NM_005515.4(MNX1):c.811del (p.Arg271fs) deletion not provided [RCV000487416] Chr7:157006520 [GRCh38]
Chr7:156799214 [GRCh37]
Chr7:7q36.3		 likely pathogenic
GRCh38/hg38 7q34-36.3(chr7:138620939-159233475)x3 copy number gain Neurodevelopmental disorder [RCV003327610] Chr7:138620939..159233475 [GRCh38]
Chr7:7q34-36.3		 likely pathogenic
NM_005515.4(MNX1):c.852+1G>A single nucleotide variant Currarino triad [RCV000015981] Chr7:157006478 [GRCh38]
Chr7:156799172 [GRCh37]
Chr7:7q36.3		 pathogenic|likely pathogenic
NC_000007.14:g.(?_152454659)_(158705768_?)del deletion Autism [RCV000754327] Chr7:152454659..158705768 [GRCh38]
Chr7:7q36.1-36.3		 likely pathogenic
NM_005515.4(MNX1):c.852+92A>G single nucleotide variant not provided [RCV001635614] Chr7:157006387 [GRCh38]
Chr7:156799081 [GRCh37]
Chr7:7q36.3		 benign
NM_005515.4(MNX1):c.832C>T (p.Leu278Phe) single nucleotide variant not provided [RCV001771256] Chr7:157006499 [GRCh38]
Chr7:156799193 [GRCh37]
Chr7:7q36.3		 conflicting interpretations of pathogenicity|uncertain significance
NM_005515.4(MNX1):c.780C>A (p.Phe260Leu) single nucleotide variant not provided [RCV001817460] Chr7:157006551 [GRCh38]
Chr7:156799245 [GRCh37]
Chr7:7q36.3		 likely pathogenic
NM_005515.4(MNX1):c.830C>G (p.Ser277Trp) single nucleotide variant not provided [RCV001816490] Chr7:157006501 [GRCh38]
Chr7:156799195 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.752del (p.Gln251fs) deletion not provided [RCV001817755] Chr7:157006579 [GRCh38]
Chr7:156799273 [GRCh37]
Chr7:7q36.3		 pathogenic
NM_005515.4(MNX1):c.808A>C (p.Lys270Gln) single nucleotide variant Currarino triad [RCV002484909]|not provided [RCV001976744] Chr7:157006523 [GRCh38]
Chr7:156799217 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.852+12C>T single nucleotide variant not provided [RCV002167520] Chr7:157006467 [GRCh38]
Chr7:156799161 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.692-18C>T single nucleotide variant Currarino triad [RCV002508086]|not provided [RCV002127917] Chr7:157006657 [GRCh38]
Chr7:156799351 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.766C>T (p.Leu256=) single nucleotide variant not provided [RCV003121370] Chr7:157006565 [GRCh38]
Chr7:156799259 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.852G>A (p.Gln284=) single nucleotide variant Currarino triad [RCV002472167] Chr7:157006479 [GRCh38]
Chr7:156799173 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.697del (p.Ala233fs) deletion not provided [RCV003013782] Chr7:157006634 [GRCh38]
Chr7:156799328 [GRCh37]
Chr7:7q36.3		 pathogenic
NM_005515.4(MNX1):c.738C>G (p.Thr246=) single nucleotide variant not provided [RCV002914615] Chr7:157006593 [GRCh38]
Chr7:156799287 [GRCh37]
Chr7:7q36.3		 likely benign
GRCh38/hg38 7q33-36.3(chr7:137463392-159345973)x3 copy number gain Neurodevelopmental disorder [RCV003327609] Chr7:137463392..159345973 [GRCh38]
Chr7:7q33-36.3		 pathogenic
GRCh38/hg38 7q36.2-36.3(chr7:154446117-159206757)x1 copy number loss Holoprosencephaly 3 [RCV003327714] Chr7:154446117..159206757 [GRCh38]
Chr7:7q36.2-36.3		 pathogenic
NM_005515.4(MNX1):c.767T>G (p.Leu256Arg) single nucleotide variant MNX1-related condition [RCV003397530] Chr7:157006564 [GRCh38]
Chr7:156799258 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.832C>G (p.Leu278Val) single nucleotide variant MNX1-related condition [RCV003414460] Chr7:157006499 [GRCh38]
Chr7:156799193 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.792G>A (p.Lys264=) single nucleotide variant not provided [RCV003712785] Chr7:157006539 [GRCh38]
Chr7:156799233 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.852+6C>G single nucleotide variant not provided [RCV003714756] Chr7:157006473 [GRCh38]
Chr7:156799167 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.794A>T (p.Tyr265Phe) single nucleotide variant not provided [RCV003558331] Chr7:157006537 [GRCh38]
Chr7:156799231 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.692-8G>C single nucleotide variant not provided [RCV003717910] Chr7:157006647 [GRCh38]
Chr7:156799341 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.852+20C>G single nucleotide variant not provided [RCV003823215] Chr7:157006459 [GRCh38]
Chr7:156799153 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.849C>A (p.Thr283=) single nucleotide variant not provided [RCV003822608] Chr7:157006482 [GRCh38]
Chr7:156799176 [GRCh37]
Chr7:7q36.3		 likely benign
NM_005515.4(MNX1):c.712C>A (p.Leu238Met) single nucleotide variant not provided [RCV003731189] Chr7:157006619 [GRCh38]
Chr7:156799313 [GRCh37]
Chr7:7q36.3		 uncertain significance
NM_005515.4(MNX1):c.692-2A>G single nucleotide variant not provided [RCV003675173] Chr7:157006641 [GRCh38]
Chr7:156799335 [GRCh37]
Chr7:7q36.3		 likely pathogenic
NM_005515.4(MNX1):c.850C>G (p.Gln284Glu) single nucleotide variant not provided [RCV003552138] Chr7:157006481 [GRCh38]
Chr7:156799175 [GRCh37]
Chr7:7q36.3		 likely pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:321
Count of miRNA genes:267
Interacting mature miRNAs:276
Transcripts:ENST00000429228
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 3 25 3 11 3 1 22 9 9
Low 1015 221 260 60 549 43 349 76 531 85 546 338 23 34 254 1
Below cutoff 716 1001 410 191 420 112 1779 853 1833 166 516 542 84 451 1229 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000429228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7157,006,307 - 157,007,132 (+)Ensembl
RefSeq Acc Id: NR_147077
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387157,006,307 - 157,007,120 (+)NCBI
T2T-CHM13v2.07158,194,042 - 158,194,855 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC MNX1-AS2 COSMIC
Ensembl Genes ENSG00000235029 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000429228 ENTREZGENE
GTEx ENSG00000235029 GTEx
HGNC ID HGNC:40278 ENTREZGENE
Human Proteome Map MNX1-AS2 Human Proteome Map
NCBI Gene MNX1-AS2 ENTREZGENE
RNAcentral URS0000BC44DB RNACentral