Gm38948 (predicted gene, 38948) - Rat Genome Database

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Gene: Gm38948 (predicted gene, 38948) Mus musculus
Analyze
Symbol: Gm38948
Name: predicted gene, 38948
RGD ID: 10026868
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: Gm45281
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39715,714,247 - 15,720,549 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl715,705,808 - 15,718,579 (+)EnsemblGRCm39 Ensembl
GRCm38715,980,322 - 15,986,950 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl715,971,883 - 15,984,654 (+)EnsemblGRCm38mm10GRCm38
Celera713,178,684 - 13,183,564 (+)NCBICelera
Cytogenetic Map7A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm38948
82 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000210035
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl715,705,808 - 15,718,579 (+)Ensembl
GRCm38.p6 Ensembl715,971,883 - 15,984,654 (+)Ensembl
RefSeq Acc Id: XR_003946607
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39715,714,247 - 15,720,549 (+)NCBI
GRCm38715,980,323 - 15,986,950 (+)NCBI
Sequence:
RefSeq Acc Id: XR_881829
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39715,714,247 - 15,718,897 (+)NCBI
GRCm38715,980,322 - 15,984,763 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000109984 Ensembl
MGD MGI:5621833 ENTREZGENE
NCBI Gene Gm38948 ENTREZGENE
PhenoGen Gm38948 PhenoGen