Gm38944 (predicted gene, 38944) - Rat Genome Database

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Gene: Gm38944 (predicted gene, 38944) Mus musculus
Analyze
Symbol: Gm38944
Name: predicted gene, 38944
RGD ID: 10026304
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: Gm45068
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3976,345,994 - 6,348,281 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl76,345,994 - 6,347,004 (-)EnsemblGRCm39 Ensembl
GRCm3876,342,995 - 6,345,282 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl76,342,995 - 6,344,005 (-)EnsemblGRCm38mm10GRCm38
Celera76,072,585 - 6,074,774 (-)NCBICelera
Cytogenetic Map7A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14610273  


Genomics

Variants

.
Variants in Gm38944
119 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_881809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC188607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000208218
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl76,345,994 - 6,347,004 (-)Ensembl
GRCm38.p6 Ensembl76,342,995 - 6,344,005 (-)Ensembl
RefSeq Acc Id: XR_881809
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3976,345,994 - 6,348,281 (-)NCBI
GRCm3876,342,995 - 6,345,282 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000109080 Ensembl
MGD MGI:5621829 ENTREZGENE
NCBI Gene Gm38944 ENTREZGENE
PhenoGen Gm38944 PhenoGen