Gm40466 (predicted gene, 40466) - Rat Genome Database

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Gene: Gm40466 (predicted gene, 40466) Mus musculus
Analyze
Symbol: Gm40466
Name: predicted gene, 40466
RGD ID: 10024104
MGI Page MGI
Description:
Type: ncrna (Ensembl: unprocessed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: Gm36166; Gm45695; predicted gene, 36166
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39820,555,621 - 20,593,814 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl820,576,700 - 20,584,337 (+)EnsemblGRCm39 Ensembl
GRCm38819,979,994 - 20,012,604 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl820,001,099 - 20,008,736 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map8A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12520002   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in Gm40466
225 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124751082Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130447432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131773288Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1357525Pnhdlc3_mplasma non-HDL cholesterol 3 (mouse)Not determined8721249923753815Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
4142199Poats1_mpost-ovarectomy adrenal tumor susceptibility 1 (mouse)Not determined1708262628849467Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000212174
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl820,576,700 - 20,584,337 (+)Ensembl
GRCm38.p6 Ensembl820,001,099 - 20,008,736 (+)Ensembl
RefSeq Acc Id: NR_188736
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39820,555,621 - 20,593,814 (+)NCBI
RefSeq Acc Id: NR_188737
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39820,555,621 - 20,593,814 (+)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110649 Ensembl
MGD MGI:5623351 ENTREZGENE
NCBI Gene Gm40466 ENTREZGENE
PhenoGen Gm40466 PhenoGen
RNAcentral URS00026A1A07 RNACentral
  URS00026A27DD RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-14 Gm40466  predicted gene, 40466  Gm36166  predicted gene, 36166  Data Merged 737654 PROVISIONAL