Gm38551 (predicted gene, 38551) - Rat Genome Database

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Gene: Gm38551 (predicted gene, 38551) Mus musculus
Analyze
Symbol: Gm38551
Name: predicted gene, 38551
RGD ID: 10015141
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391714,670,184 - 14,708,373 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1714,669,833 - 14,716,053 (+)EnsemblGRCm39 Ensembl
GRCm381714,449,922 - 14,488,111 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1714,449,571 - 14,495,791 (+)EnsemblGRCm38mm10GRCm38
Celera1715,250,799 - 15,289,387 (+)NCBICelera
Cytogenetic Map17A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Gm38551
1223 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1558807Ceat1_mchronic experimental autoimmune thyroiditis 1 (mouse)Not determined171263668226401133Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17787584329487423Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4142507Obrq13_mobesity resistance QTL 13 (mouse)Not determined1219832925076769Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_876627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CT010437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000232609
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1714,669,833 - 14,716,053 (+)Ensembl
GRCm38.p6 Ensembl1714,449,571 - 14,495,791 (+)Ensembl
RefSeq Acc Id: XR_876627
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391714,670,184 - 14,708,373 (+)NCBI
GRCm381714,449,922 - 14,488,111 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000116801 Ensembl
MGD MGI:5621436 ENTREZGENE
NCBI Gene Gm38551 ENTREZGENE
PhenoGen Gm38551 PhenoGen