Gm40814 (predicted gene, 40814) - Rat Genome Database

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Gene: Gm40814 (predicted gene, 40814) Mus musculus
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Symbol: Gm40814
Name: predicted gene, 40814
RGD ID: 10008200
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MLV-related proviral Env polyprotein-like; uncharacterized protein Gm40814
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39118,870,852 - 8,879,275 (+)NCBIGRCm39GRCm39mm39
GRCm38118,920,852 - 8,929,275 (+)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map11A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Gm40814
361 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226794Feml9_mfemur length 9, 5 week (mouse)11705000016750000Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_030246476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL645571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_030246476   ⟹   XP_030102336
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39118,870,852 - 8,879,275 (+)NCBI
GRCm38118,920,852 - 8,929,275 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_030102336 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_030102336   ⟸   XM_030246476
- UniProtKB: Q811N4 (UniProtKB/Swiss-Prot),   Q811M9 (UniProtKB/Swiss-Prot),   Q80SY1 (UniProtKB/Swiss-Prot),   Q80SY0 (UniProtKB/Swiss-Prot),   Q80SW8 (UniProtKB/Swiss-Prot),   Q80SW7 (UniProtKB/Swiss-Prot),   Q78N94 (UniProtKB/Swiss-Prot),   Q78N73 (UniProtKB/Swiss-Prot),   Q78N71 (UniProtKB/Swiss-Prot),   P10404 (UniProtKB/Swiss-Prot)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH 1.10.287.210 UniProtKB/Swiss-Prot
  ENV polyprotein, receptor-binding domain UniProtKB/Swiss-Prot
InterPro FMuLV_rcpt-bd UniProtKB/Swiss-Prot
  TLV/ENV_coat_polyprotein UniProtKB/Swiss-Prot
MGD MGI:5623699 ENTREZGENE
NCBI Gene Gm40814 ENTREZGENE
PANTHER ENVELOPE POLYPROTEIN-RELATED UniProtKB/Swiss-Prot
  VIRAL ENVELOPE PROTEIN UniProtKB/Swiss-Prot
Pfam TLV_coat UniProtKB/Swiss-Prot
PhenoGen Gm40814 PhenoGen
Superfamily-SCOP ENV polyprotein, receptor-binding domain UniProtKB/Swiss-Prot
  Virus ectodomain UniProtKB/Swiss-Prot
UniProt ENV1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q78N71 ENTREZGENE
  Q78N73 ENTREZGENE
  Q78N94 ENTREZGENE
  Q80SW7 ENTREZGENE
  Q80SW8 ENTREZGENE
  Q80SY0 ENTREZGENE
  Q80SY1 ENTREZGENE
  Q811M9 ENTREZGENE
  Q811N4 ENTREZGENE
UniProt Secondary Q78N71 UniProtKB/Swiss-Prot
  Q78N73 UniProtKB/Swiss-Prot
  Q78N94 UniProtKB/Swiss-Prot
  Q80SW7 UniProtKB/Swiss-Prot
  Q80SW8 UniProtKB/Swiss-Prot
  Q80SY0 UniProtKB/Swiss-Prot
  Q80SY1 UniProtKB/Swiss-Prot
  Q811M9 UniProtKB/Swiss-Prot
  Q811N4 UniProtKB/Swiss-Prot