CVCL_0531 - Rat Genome Database

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Cell Line : CVCL_0531 (SK-N-SH) Homo sapiens

Symbol: CVCL_0531
Name: SK-N-SH
RGD ID: 21120297
Cell Line Type: cancer cell line
Origin: Derived from metastatic site: Bone marrow.
Gender: Female
Source: From: Memorial Sloan Kettering Cancer Center; New York; USA
Research Use: Omics: Array-based CGH; Omics: ATAC-Seq; Omics: ChIP-seq epigenome analysis; Omics: Deep exome analysis; Omics: Deep RNAseq analysis; Omics: DNA methylation analysis; Omics: SNP array analysis; Omics: Transcriptome analysis
Phenotype: Doubling time: 44 hours (PubMed=4748425); Microsatellite instability: Stable (MSS) (Sanger)
Genomic Alteration: Sequence variation: Heterozygous for ALK p.Phe1174Leu (c.3522C>A) (ClinVar=VCV000217852) (PubMed=18724359; PubMed=28350380; CCLE; Cosmic-CLP); Sequence variation: Heterozygous for NRAS p.Gln61Lys (c.181C>A) (ClinVar=VCV000073058) (CCLE; Cosmic-CLP)
Groups: Part of: Cancer Cell Line Encyclopedia (CCLE) project; Part of: COSMIC cell lines project; Part of: ENCODE project common cell types; tier 3; Registration: Memorial Sloan Kettering Cancer Center Office of Technology Development; SK1980-529
Description: HLA typing: A*24:02,01:01; B*49:01,18:01; C*07:06,07:06 (PubMed=25960936); Genome ancestry: African=0.37%; Native American=0.07%; East Asian, North=1.63%; East Asian, South=0%; South Asian=0%; European, North=66.77%; European, South=31.16% (PubMed=30894373)
Child Cell Lines: CVCL_0019 (SH-SY5Y)
CVCL_0524 (SH-EP)
CVCL_D044 (SK-N-SH-RA)
CVCL_IY16 (SH-F)
CVCL_IY17 (SH-N)
CVCL_W973 (SH-FE)
CVCL_W974 (SH-IN)
Aliases: NSH; SK N SH; SK-N-CH; SK-NSH; SKN-SH; SKNSH
Disease(s): neuroblastoma (DOID:769) [NCI:C3270,ORDO:635]

References
Additional References at PubMed
PMID:29704   PMID:62055   PMID:833871   PMID:922665   PMID:1354203   PMID:2535691   PMID:2846152   PMID:2987426   PMID:3518877   PMID:4748425   PMID:6582512   PMID:6610792  
PMID:6888561   PMID:6935474   PMID:7037175   PMID:7838528   PMID:8040301   PMID:8069455   PMID:8617485   PMID:10074188   PMID:10630978   PMID:11550280   PMID:12702577   PMID:15892104  
PMID:16822308   PMID:18724359   PMID:18923524   PMID:18957096   PMID:22213050   PMID:22460905   PMID:23325432   PMID:24466371   PMID:25485619   PMID:25960936   PMID:27397505   PMID:28350380  
PMID:30894373   PMID:31068700  


Additional Information

Database Acc Id Source(s)
ArrayExpress E-MTAB-2706 CELLOSAURUS
  E-MTAB-3610 CELLOSAURUS
ATCC HTB-11 CELLOSAURUS
BioSample SAMN01821600 CELLOSAURUS
  SAMN03472879 CELLOSAURUS
  SAMN10987849 CELLOSAURUS
BTO BTO_0001620 CELLOSAURUS
CCRID 3111C0001CCC000086 CELLOSAURUS
  3131C0001000700051 CELLOSAURUS
  3142C0001000000047 CELLOSAURUS
Cell Line Ontology CLO_0009059 CELLOSAURUS
  CLO_0050268 CELLOSAURUS
Cell Model Passports SIDM01098 CELLOSAURUS
Cellosaurus CVCL_0531 CELLOSAURUS
ChEMBL-Cells CHEMBL3307745 CELLOSAURUS
ChEMBL-Targets CHEMBL614924 CELLOSAURUS
COSMIC Samples 1019929 CELLOSAURUS
  1037355 CELLOSAURUS
  1078393 CELLOSAURUS
  1082519 CELLOSAURUS
  1099151 CELLOSAURUS
  1109108 CELLOSAURUS
  1109371 CELLOSAURUS
  1153800 CELLOSAURUS
  1153806 CELLOSAURUS
  1162006 CELLOSAURUS
  1167420 CELLOSAURUS
  1167993 CELLOSAURUS
  1518079 CELLOSAURUS
  1526640 CELLOSAURUS
  2058116 CELLOSAURUS
  2131595 CELLOSAURUS
  2239469 CELLOSAURUS
  2393645 CELLOSAURUS
  2485952 CELLOSAURUS
  697284 CELLOSAURUS
  717431 CELLOSAURUS
  801743 CELLOSAURUS
  848936 CELLOSAURUS
  922656 CELLOSAURUS
  923830 CELLOSAURUS
  930078 CELLOSAURUS
  947706 CELLOSAURUS
Cosmic-CLP 717431 CELLOSAURUS
DepMap ACH-000149 CELLOSAURUS
DOI 10.1007/0-306-46872-7_2 CELLOSAURUS
  10.1007/978-1-4757-1647-4_13 CELLOSAURUS
  10.1016/B978-0-12-333530-2.50006-X CELLOSAURUS
  10.1159/000407025 CELLOSAURUS
ECACC 86012802 CELLOSAURUS
EFO EFO_0003072 CELLOSAURUS
ENCODE ENCBS007RAH CELLOSAURUS
  ENCBS018DDZ CELLOSAURUS
  ENCBS061YYT CELLOSAURUS
  ENCBS324TZB CELLOSAURUS
  ENCBS360ENC CELLOSAURUS
  ENCBS361ENC CELLOSAURUS
  ENCBS362ENC CELLOSAURUS
  ENCBS363ENC CELLOSAURUS
  ENCBS364ENC CELLOSAURUS
  ENCBS365ENC CELLOSAURUS
  ENCBS376ENC CELLOSAURUS
  ENCBS387WHS CELLOSAURUS
  ENCBS428ENC CELLOSAURUS
  ENCBS433ENC CELLOSAURUS
  ENCBS434ENC CELLOSAURUS
  ENCBS435ENC CELLOSAURUS
  ENCBS436ENC CELLOSAURUS
  ENCBS437ENC CELLOSAURUS
  ENCBS438ENC CELLOSAURUS
  ENCBS439KOM CELLOSAURUS
  ENCBS489AAA CELLOSAURUS
  ENCBS490AAA CELLOSAURUS
  ENCBS491AAA CELLOSAURUS
  ENCBS492AAA CELLOSAURUS
  ENCBS495AAA CELLOSAURUS
  ENCBS500EWH CELLOSAURUS
  ENCBS526AQV CELLOSAURUS
  ENCBS592MTQ CELLOSAURUS
GDSC 717431 CELLOSAURUS
GEO GSM1003626 CELLOSAURUS
  GSM1003627 CELLOSAURUS
  GSM1003628 CELLOSAURUS
  GSM1003629 CELLOSAURUS
  GSM1003630 CELLOSAURUS
  GSM1003631 CELLOSAURUS
  GSM1003632 CELLOSAURUS
  GSM1003633 CELLOSAURUS
  GSM1008585 CELLOSAURUS
  GSM1010735 CELLOSAURUS
  GSM1010738 CELLOSAURUS
  GSM1010739 CELLOSAURUS
  GSM1010750 CELLOSAURUS
  GSM1010751 CELLOSAURUS
  GSM1010763 CELLOSAURUS
  GSM1010767 CELLOSAURUS
  GSM1010773 CELLOSAURUS
  GSM1010799 CELLOSAURUS
  GSM1010806 CELLOSAURUS
  GSM1010816 CELLOSAURUS
  GSM1010817 CELLOSAURUS
  GSM1010834 CELLOSAURUS
  GSM1010835 CELLOSAURUS
  GSM1010840 CELLOSAURUS
  GSM1010858 CELLOSAURUS
  GSM1010880 CELLOSAURUS
  GSM1010887 CELLOSAURUS
  GSM1010897 CELLOSAURUS
  GSM1010900 CELLOSAURUS
  GSM1010901 CELLOSAURUS
  GSM1622296 CELLOSAURUS
  GSM1670454 CELLOSAURUS
  GSM231674 CELLOSAURUS
  GSM231675 CELLOSAURUS
  GSM231676 CELLOSAURUS
  GSM231677 CELLOSAURUS
  GSM231678 CELLOSAURUS
  GSM231679 CELLOSAURUS
  GSM231680 CELLOSAURUS
  GSM231681 CELLOSAURUS
  GSM231682 CELLOSAURUS
  GSM231683 CELLOSAURUS
  GSM231684 CELLOSAURUS
  GSM231685 CELLOSAURUS
  GSM231686 CELLOSAURUS
  GSM231687 CELLOSAURUS
  GSM231688 CELLOSAURUS
  GSM231689 CELLOSAURUS
  GSM231690 CELLOSAURUS
  GSM231691 CELLOSAURUS
  GSM231692 CELLOSAURUS
  GSM231693 CELLOSAURUS
  GSM2371259 CELLOSAURUS
  GSM2394365 CELLOSAURUS
  GSM2824362 CELLOSAURUS
  GSM2824363 CELLOSAURUS
  GSM314027 CELLOSAURUS
  GSM333814 CELLOSAURUS
  GSM4104597 CELLOSAURUS
  GSM4104598 CELLOSAURUS
  GSM4104637 CELLOSAURUS
  GSM4104638 CELLOSAURUS
  GSM563357 CELLOSAURUS
  GSM692864 CELLOSAURUS
  GSM803335 CELLOSAURUS
  GSM887597 CELLOSAURUS
  GSM888680 CELLOSAURUS
  GSM923419 CELLOSAURUS
  GSM923441 CELLOSAURUS
ICLC HTL96019 CELLOSAURUS
KCLB 30011 CELLOSAURUS
LINCS_LDP LCL-1971 CELLOSAURUS
Lonza 80 CELLOSAURUS
NCIt C3270 CELLOSAURUS
Orphanet 635 CELLOSAURUS
PharmacoDB SKNSH_1409_2019 CELLOSAURUS
Progenetix CVCL_0531 CELLOSAURUS
RCB RCB0426 CELLOSAURUS
Wikidata Q28308636 CELLOSAURUS