CVCL_0009 - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Cell Line : CVCL_0009 (HDLM-2) Homo sapiens

Symbol: CVCL_0009
Name: HDLM-2
RGD ID: 21113452
Cell Line Type: cancer cell line
Origin: Derived from sampling site: Pleural effusion.
Gender: Male
Research Use: Omics: Cell surface proteome; Omics: Deep antibody staining analysis; Omics: Deep exome analysis; Omics: Deep RNAseq analysis; Omics: DNA methylation analysis; Omics: SNP array analysis; Omics: Transcriptome analysis
Phenotype: Doubling time: ~70-75 hours (DSMZ); Microsatellite instability: Stable (MSS) (Sanger)
Genomic Alteration: Sequence variation: TP53 p.Ser261fs c.?(782delins) (PubMed=17065008)
Groups: Part of: Cancer Cell Line Encyclopedia (CCLE) project; Part of: COSMIC cell lines project; Part of: LL-100 blood cancer cell line panel
Description: Genome ancestry: African=1.09%; Native American=0%; East Asian, North=1.64%; East Asian, South=0%; South Asian=0.05%; European, North=62.14%; European, South=35.08% (PubMed=30894373)
Child Cell Lines: CVCL_M696 (HDLM-2d)
Originate from same individual as: CVCL_M693 (HDLM-1)
CVCL_M697 (HDLM-3)
Aliases: HD-LM-2; HDLM2
Disease(s): Hodgkin's lymphoma (DOID:8567) [NCI:C9357,ORDO:98293]

References
Additional References at PubMed
PMID:2602652   PMID:2690233   PMID:3713248   PMID:8558920   PMID:9685479   PMID:12581897   PMID:17065008   PMID:20164919   PMID:22460905   PMID:25894527   PMID:27397505   PMID:29533902  
PMID:30894373   PMID:31068700   PMID:31160637  


Additional Information

Database Acc Id Source(s)
ArrayExpress E-MTAB-3610 CELLOSAURUS
  E-MTAB-7721 CELLOSAURUS
  E-MTAB-7722 CELLOSAURUS
  E-MTAB-783 CELLOSAURUS
BioSample SAMN03473364 CELLOSAURUS
  SAMN10988513 CELLOSAURUS
Cell Line Ontology CLO_0003671 CELLOSAURUS
Cell Model Passports SIDM01064 CELLOSAURUS
Cellosaurus CVCL_0009 CELLOSAURUS
ChEMBL-Cells CHEMBL3308234 CELLOSAURUS
ChEMBL-Targets CHEMBL2366231 CELLOSAURUS
COSMIC Samples 1013909 CELLOSAURUS
  1086355 CELLOSAURUS
  1278832 CELLOSAURUS
  1289699 CELLOSAURUS
  1290220 CELLOSAURUS
  1432040 CELLOSAURUS
  2276322 CELLOSAURUS
  2464309 CELLOSAURUS
  924110 CELLOSAURUS
  988701 CELLOSAURUS
Cosmic-CLP 924110 CELLOSAURUS
DepMap ACH-000267 CELLOSAURUS
DOI 10.1016/B978-0-12-221970-2.50457-5 CELLOSAURUS
DSMZ ACC-17 CELLOSAURUS
GDSC 924110 CELLOSAURUS
GEO GSM1669870 CELLOSAURUS
  GSM335390 CELLOSAURUS
  GSM381298 CELLOSAURUS
  GSM499724 CELLOSAURUS
  GSM499732 CELLOSAURUS
  GSM552430 CELLOSAURUS
  GSM646534 CELLOSAURUS
  GSM887064 CELLOSAURUS
  GSM888134 CELLOSAURUS
IGRhCellID HDLM2 CELLOSAURUS
LINCS_LDP LCL-2007 CELLOSAURUS
NCIt C9357 CELLOSAURUS
Orphanet 98293 CELLOSAURUS
PharmacoDB HDLM2_521_2019 CELLOSAURUS
PRIDE PXD000589 CELLOSAURUS
Progenetix CVCL_0009 CELLOSAURUS
Wikidata Q54882175 CELLOSAURUS