CVCL_0008 - Rat Genome Database

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Cell Line : CVCL_0008 (Daudi) Homo sapiens

Symbol: CVCL_0008
Name: Daudi
RGD ID: 21113450
Cell Line Type: cancer cell line
Origin: Population: African; Kenyan; Transformant: Epstein-Barr virus (EBV)(NCBI-Taxonomy; 10376)
Gender: Male
Research Use: Omics: Deep antibody staining analysis; Omics: Deep exome analysis; Omics: Deep RNAseq analysis; Omics: DNA methylation analysis; Omics: Protein expression by reverse-phase protein arrays; Omics: SNP array analysis; Omics: Transcriptome analysis; Omics: Virome analysis using RNAseq
Availability: Discontinued: ATCC; CRL-7917; true.
Phenotype: Doubling time: 23.7 hours (PubMed=8847894); ~48 hours (DSMZ); Microsatellite instability: Instable (MSI-low) (Sanger)
Genomic Alteration: Sequence variation: Gene fusion; MYC-IGH (PubMed=3116544; PubMed=6806672); Sequence variation: Homozygous for B2M p.Met1? (c.3G>C) (PubMed=8197130; PubMed=11894933; CCLE; Cosmic-CLP); Sequence variation: Homozygous for CTNNB1 p.Ala5_Ala80del (c.14_241del228) (ATCC); Sequence variation: Heterozygous for TP53 p.Gly266Glu (c.797G>A) (ClinVar=VCV000161516) (CCLE; Cosmic-CLP)
Caution: Caution: TP53 mutation indicated incorrectly as being at c.637C>T in PubMed=2052620
Groups: Part of: 12th International Histocompatibility Workshop (12IHW) cell line panel; Part of: Cancer Cell Line Encyclopedia (CCLE) project; Part of: COSMIC cell lines project; Part of: Human variation panel; Part of: LL-100 blood cancer cell line panel; Part of: MD Anderson Cell Lines Project
Description: HLA typing: A*66:01,01:02; B*58:01,35:01; C*03:02,06:02; DQA1*01:03,01:03; DQB1*06:13,06:13; DRB1*13:02,03:27 (PubMed=25960936); HLA typing: A*66:01,01:02; B*58:01:01:01,58:02:01; C*03:02:02:01,06:02; DPA1*01:03:01,02:01:01:01; DPB1*02:01:02:01,106:01; DQA1*01:02,01:03; DQB1*06:04:01,06:02; DRB1*13:01:01,13:02:01; DRB3*02:02,03:01:01; DRB6*02 (IPD-IMGT/HLA; 10471); Genome ancestry: African=91.6%; Native American=0.12%; East Asian, North=2.24%; East Asian, South=0%; South Asian=1.3%; European, North=0%; European, South=4.74% (PubMed=30894373)
Child Cell Lines: CVCL_5I55 (RST2)
CVCL_6220 (Daudi-TG)
CVCL_UF09 (DIF10)
CVCL_UF10 (DIF2)
CVCL_UF11 (DIF3)
CVCL_UF14 (DIF8)
CVCL_UF15 (DIF9)
CVCL_ZI16 (DUT)
Aliases: DAUDI; GM03190; GM03190A; GM17346; GM3190; N; NK 10a; NK-10A; NK10a
Disease(s): Burkitt lymphoma (DOID:8584) [ORDO:543]

References
Additional References at PubMed
PMID:170370   PMID:216485   PMID:2052620   PMID:2140233   PMID:2470097   PMID:3026973   PMID:3034807   PMID:3080238   PMID:3116544   PMID:3518877   PMID:3785169   PMID:4122458  
PMID:4174339   PMID:4178827   PMID:4321974   PMID:4364259   PMID:4878906   PMID:5021706   PMID:6186604   PMID:6200433   PMID:6231253   PMID:6286763   PMID:6500159   PMID:6547209  
PMID:6582512   PMID:6806672   PMID:6935474   PMID:6954533   PMID:7316467   PMID:7849311   PMID:8197130   PMID:8301159   PMID:8515068   PMID:8558913   PMID:8558920   PMID:8847894  
PMID:9192833   PMID:9473234   PMID:9510473   PMID:9685479   PMID:9737686   PMID:9738977   PMID:9973220   PMID:11021758   PMID:11894933   PMID:12145705   PMID:12967475   PMID:14504097  
PMID:15028022   PMID:19358282   PMID:20164919   PMID:20215515   PMID:20454443   PMID:22460905   PMID:22885699   PMID:24590883   PMID:25355872   PMID:25485619   PMID:25960936   PMID:27397505  
PMID:28196595   PMID:29892436   PMID:30285677   PMID:30894373   PMID:31068700   PMID:31160637  


Additional Information

Database Acc Id Source(s)
ArrayExpress E-MTAB-2706 CELLOSAURUS
  E-MTAB-2770 CELLOSAURUS
  E-MTAB-3610 CELLOSAURUS
  E-MTAB-38 CELLOSAURUS
  E-MTAB-7721 CELLOSAURUS
  E-MTAB-7722 CELLOSAURUS
  E-MTAB-783 CELLOSAURUS
ATCC CCL-213 CELLOSAURUS
  CRL-7917 CELLOSAURUS
BCRC 60192 CELLOSAURUS
BioSample SAMN00808283 CELLOSAURUS
  SAMN01821546 CELLOSAURUS
  SAMN01821623 CELLOSAURUS
  SAMN03472413 CELLOSAURUS
  SAMN10987948 CELLOSAURUS
BTO BTO_0001561 CELLOSAURUS
CCRID 3111C0001CCC000134 CELLOSAURUS
  3111C0002000000053 CELLOSAURUS
  3131C0001000700140 CELLOSAURUS
  3142C0001000000082 CELLOSAURUS
Cell Line Ontology CLO_0002708 CELLOSAURUS
  CLO_0013411 CELLOSAURUS
  CLO_0013740 CELLOSAURUS
  CLO_0050991 CELLOSAURUS
Cell Model Passports SIDM00845 CELLOSAURUS
CelloPub CLPUB00447 CELLOSAURUS
Cellosaurus CVCL_0008 CELLOSAURUS
ChEMBL-Cells CHEMBL3307579 CELLOSAURUS
ChEMBL-Targets CHEMBL614281 CELLOSAURUS
Coriell GM03190 CELLOSAURUS
  GM17346 CELLOSAURUS
COSMIC Samples 1019315 CELLOSAURUS
  1037701 CELLOSAURUS
  1070708 CELLOSAURUS
  1071878 CELLOSAURUS
  1086326 CELLOSAURUS
  1093789 CELLOSAURUS
  1118470 CELLOSAURUS
  1176616 CELLOSAURUS
  1191690 CELLOSAURUS
  1517663 CELLOSAURUS
  1995384 CELLOSAURUS
  2649240 CELLOSAURUS
  2759407 CELLOSAURUS
  2760061 CELLOSAURUS
  2814537 CELLOSAURUS
  2815216 CELLOSAURUS
  2823073 CELLOSAURUS
  687838 CELLOSAURUS
  906831 CELLOSAURUS
  919135 CELLOSAURUS
  929815 CELLOSAURUS
  931102 CELLOSAURUS
  932762 CELLOSAURUS
  991548 CELLOSAURUS
  996304 CELLOSAURUS
  998716 CELLOSAURUS
Cosmic-CLP 906831 CELLOSAURUS
DepMap ACH-000786 CELLOSAURUS
DSMZ ACC-78 CELLOSAURUS
ECACC 85011437 CELLOSAURUS
  94071449 CELLOSAURUS
EFO EFO_0002169 CELLOSAURUS
GDSC 906831 CELLOSAURUS
GEO GSM1374459 CELLOSAURUS
  GSM1669726 CELLOSAURUS
  GSM862859 CELLOSAURUS
  GSM862860 CELLOSAURUS
  GSM862861 CELLOSAURUS
  GSM862862 CELLOSAURUS
  GSM886973 CELLOSAURUS
  GSM888042 CELLOSAURUS
  GSM960117 CELLOSAURUS
  GSM960118 CELLOSAURUS
  GSM960119 CELLOSAURUS
  GSM960120 CELLOSAURUS
  GSM99381 CELLOSAURUS
ICLC HTL95024 CELLOSAURUS
IGRhCellID Daudi CELLOSAURUS
IHW IHW09366 CELLOSAURUS
IPD-IMGT/HLA 10471 CELLOSAURUS
JCRB JCRB9071 CELLOSAURUS
KCLB 10213 CELLOSAURUS
LiGeA CCLE_233 CELLOSAURUS
LINCS_LDP LCL-2018 CELLOSAURUS
Lonza 490 CELLOSAURUS
NCIt C27694 CELLOSAURUS
Orphanet 543 CELLOSAURUS
PharmacoDB Daudi_283_2019 CELLOSAURUS
Progenetix CVCL_0008 CELLOSAURUS
RCB RCB1640 CELLOSAURUS
Wikidata Q54828579 CELLOSAURUS