Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Beachy PA, etal., Genes Dev. 2010 Sep 15;24(18):2001-12.
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(TAS) traceable author statement]
  • 19 additional annotations were made from Beachy PA, etal., Genes Dev. 2010 Sep 15;24(18):2001-12.
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh


    • An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from Pipeline to import KEGG annotations from KEGG into RGD
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh
  • Original References(s): rno:04340


    • An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Mimeault M and Batra SK, Pharmacol Rev. 2010 Sep;62(3):497-524.
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(TAS) traceable author statement]
  • 30 additional annotations were made from Mimeault M and Batra SK, Pharmacol Rev. 2010 Sep;62(3):497-524.
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh


    • An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Pipeline to import Pathway Interaction Database annotations from NCI into RGD
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(EXP) inferred from experiment]
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh
  • Original References(s): PID:200168


    • An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Pipeline to import Pathway Interaction Database annotations from NCI into RGD
  • The annotation has been inferred from sequence orthology with SHH (Homo sapiens) [(EXP) inferred from experiment]
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh
  • Original References(s): PID:200172


    • An association has been curated linking Shh and Hedgehog signaling pathway in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Nicot A, etal., J Neurosci 2002 Nov 1;22(21):9244-54.
  • The annotation has been inferred from sequence orthology with Shh (Mus musculus) [(IDA) inferred from direct assay]
  • 3 additional annotations were made from Nicot A, etal., J Neurosci 2002 Nov 1;22(21):9244-54.
  • 101 RGD objects have been annotated to Hedgehog signaling pathway  (PW:0000122)
  • 94 papers in RGD have been used to annotate Shh


    • Go Back to source page   Continue to Ontology report