Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Shank3 and AMPA glutamate receptor clustering in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Shank3 (Mus musculus)
  • 12 RGD objects have been annotated to AMPA glutamate receptor clustering  (GO:0097113)
  • 27 papers in RGD have been used to annotate Shank3
  • Qualifier: involved_in
  • Curation Notes: (MGI:5013997|PMID:21558424), (MGI:5320264|PMID:21795692)
  • Original References(s): MGI:5013997 MGI:5320264 PMID:21558424 PMID:21795692


  • An association has been curated linking Shank3 and AMPA glutamate receptor clustering in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
  •  
  • The annotation was made from Verpelli C, etal., J Biol Chem. 2011 Oct 7;286(40):34839-50. doi: 10.1074/jbc.M111.258384. Epub 2011 Jul 27.
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:Q4ACU6
  • 7 additional annotations were made from Verpelli C, etal., J Biol Chem. 2011 Oct 7;286(40):34839-50. doi: 10.1074/jbc.M111.258384. Epub 2011 Jul 27.
  • 12 RGD objects have been annotated to AMPA glutamate receptor clustering  (GO:0097113)
  • 27 papers in RGD have been used to annotate Shank3
  • Qualifier: involved_in
  • Curation Notes: PMID:21795692


  • An association has been curated linking Shank3 and AMPA glutamate receptor clustering in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:Q4ACU6 & ensembl:ENSMUSP00000104932
  • 12 RGD objects have been annotated to AMPA glutamate receptor clustering  (GO:0097113)
  • 27 papers in RGD have been used to annotate Shank3
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


  • Go Back to source page   Continue to Ontology report