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GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Synj1 and phosphatidylinositol dephosphorylation in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Synj1 (Mus musculus)
  • 31 RGD objects have been annotated to phosphatidylinositol dephosphorylation  (GO:0046856)
  • 33 papers in RGD have been used to annotate Synj1
  • Curation Notes: MGI:MGI:2179801 (MGI:MGI:1346710|PMID:10535736), (MGI:MGI:3803033|PMID:18591654)
  • Original References(s): MGI:MGI:1346710, MGI:MGI:3803033, PMID:10535736, PMID:18591654


  • An association has been curated linking Synj1 and phosphatidylinositol dephosphorylation in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with InterPro:IPR000300 & InterPro:IPR034972
  • 31 RGD objects have been annotated to phosphatidylinositol dephosphorylation  (GO:0046856)
  • 33 papers in RGD have been used to annotate Synj1
  • Curation Notes: GO_REF:0000002
  • Original References(s): GO_REF:0000002


  • An association has been curated linking Synj1 and phosphatidylinositol dephosphorylation in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SYNJ1 (Homo sapiens)
  • 31 RGD objects have been annotated to phosphatidylinositol dephosphorylation  (GO:0046856)
  • 33 papers in RGD have been used to annotate Synj1
  • Curation Notes: (PMID:18093523), (PMID:18591654)
  • Original References(s): PMID:18093523, PMID:18591654


  • An association has been curated linking Synj1 and phosphatidylinositol dephosphorylation in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with FB:FBgn0023508 & MGI:MGI:103257 & MGI:MGI:109589 & MGI:MGI:1354961 & PANTHER:PTN000127779 & PomBase:SPBC2G2.02 & Synj2 (Rattus norvegicus) & SGD:S000001264 & SGD:S000005050 & SGD:S000005426 & SGD:S000005635 & TAIR:locus:2015388 & UniProtKB:A0A1D8PIH6 & UniProtKB:O43426 & UniProtKB:P32019 & UniProtKB:Q9BT40 & dictyBase:DDB_G0267462 & dictyBase:DDB_G0284187 & dictyBase:DDB_G0292392
  • 71313 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 31 RGD objects have been annotated to phosphatidylinositol dephosphorylation  (GO:0046856)
  • 33 papers in RGD have been used to annotate Synj1
  • Curation Notes: PMID:21873635


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    RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.