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GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Clock and positive regulation of DNA-templated transcription in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Matagne V, etal., J Neuroendocrinol. 2012 Jun;24(6):916-29. doi: 10.1111/j.1365-2826.2012.02302.x.
  • 7 additional annotations were made from Matagne V, etal., J Neuroendocrinol. 2012 Jun;24(6):916-29. doi: 10.1111/j.1365-2826.2012.02302.x.
  • 1722 RGD objects have been annotated to positive regulation of DNA-templated transcription  (GO:0045893)
  • 20 papers in RGD have been used to annotate Clock
  • Qualifier: involved_in
  • Curation Notes: PMID:22356123


    • An association has been curated linking Clock and positive regulation of DNA-templated transcription in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:O08785
  • 1722 RGD objects have been annotated to positive regulation of DNA-templated transcription  (GO:0045893)
  • 20 papers in RGD have been used to annotate Clock
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000024
  • Original References(s): GO_REF:0000024


    • An association has been curated linking Clock and positive regulation of DNA-templated transcription in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with CLOCK (Homo sapiens)
  • 1722 RGD objects have been annotated to positive regulation of DNA-templated transcription  (GO:0045893)
  • 20 papers in RGD have been used to annotate Clock
  • Qualifier: involved_in
  • Curation Notes: (PMID:10864977), (PMID:23229515), (PMID:23785138)
  • Original References(s): PMID:10864977 PMID:23229515 PMID:23785138


    • An association has been curated linking Clock and positive regulation of DNA-templated transcription in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Clock (Mus musculus)
  • 1722 RGD objects have been annotated to positive regulation of DNA-templated transcription  (GO:0045893)
  • 20 papers in RGD have been used to annotate Clock
  • Qualifier: involved_in
  • Curation Notes: (MGI:2388855|PMID:12397359), (MGI:3794495|PMID:18316400), (MGI:3843127|PMID:19299583), (MGI:4410413|PMID:19605937), (MGI:4837055|PMID:20430893), (MGI:5292598|PMID:21768648), (MGI:5442460|PMID:22653727), (MGI:5553247|PMID:12738229), (MGI:5568140|PMID:24736997), (MGI:5582861|PMID:24089055), (MGI:5918767|PMID:25961797)
  • Original References(s): MGI:2388855 MGI:3794495 MGI:3843127 MGI:4410413 MGI:4837055 MGI:5292598 MGI:5442460 MGI:5553247 MGI:5568140 MGI:5582861 MGI:5918767 PMID:12397359 PMID:12738229 PMID:18316400 PMID:19299583 PMID:19605937 PMID:20430893 PMID:21768648 PMID:22653727 PMID:24089055 PMID:24736997 PMID:25961797


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