Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

7 Annotations Found.

An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD pipelines: automated import of non-rat, non-mouse GO annotations
  • The annotation has been inferred from electronic annotation with PANTHER:PTHR10283:SF109
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: involved_in
  • Original References(s): GO_REF:0000118


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with Slc13a5 (Rattus norvegicus)
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Original References(s): PMID:12177002 PMID:16524379 REF_RGD_ID:2303797 REF_RGD_ID:633417


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD pipelines: automated import of non-rat, non-mouse GO annotations
  • The annotation has been inferred from electronic annotation with UniProtKB:Q67BT3 & ensembl:ENSMUSP00000021161
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: involved_in
  • Original References(s): GO_REF:0000107


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from RGD pipelines: automated import of non-rat, non-mouse GO annotations
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: involved_in
  • Curation Notes: (PMID:30054523)
  • Original References(s): PMID:30054523


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from RGD pipelines: automated import of non-rat, non-mouse GO annotations
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: involved_in
  • Curation Notes: (PMID:12445824), (PMID:21264516), (PMID:26176240), (PMID:26324167), (PMID:26384929), (PMID:33597751)
  • Original References(s): PMID:12445824 PMID:21264516 PMID:26176240 PMID:26324167 PMID:26384929 PMID:33597751


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD pipelines: automated import of non-rat, non-mouse GO annotations
  • The annotation has been inferred from biological aspect of ancestor with MGI:3037150 & PANTHER:PTN002568167 & Slc13a5 (Rattus norvegicus) & UniProtKB:Q86YT5 & ZFIN:ZDB-GENE-030131-4628
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: involved_in
  • Original References(s): GO_REF:0000033


    • An association has been curated linking SLC13A5 and citrate transport in Homo sapiens.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with Slc13a5 (Mus musculus)
  • 6 RGD objects have been annotated to citrate transport  (GO:0015746)
  • 3 papers in RGD have been used to annotate SLC13A5
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: (PMID:14656221)
  • Original References(s): PMID:14656221


    • Go Back to source page   Continue to Ontology report