Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Smpd4 and sphingomyelin catabolic process in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Smpd4 (Mus musculus)
  • 9 RGD objects have been annotated to sphingomyelin catabolic process  (GO:0006685)
  • 4 papers in RGD have been used to annotate Smpd4
  • Qualifier: involved_in
  • Curation Notes: (MGI:6450503|PMID:25180167)
  • Original References(s): MGI:6450503 PMID:25180167


  • An association has been curated linking Smpd4 and sphingomyelin catabolic process in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with MGI:1924876 & PANTHER:PTN000988169 & UniProtKB:Q9NXE4
  • 66650 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 9 RGD objects have been annotated to sphingomyelin catabolic process  (GO:0006685)
  • 4 papers in RGD have been used to annotate Smpd4
  • Qualifier: involved_in
  • Curation Notes: PMID:21873635


  • An association has been curated linking Smpd4 and sphingomyelin catabolic process in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SMPD4 (Homo sapiens)
  • 9 RGD objects have been annotated to sphingomyelin catabolic process  (GO:0006685)
  • 4 papers in RGD have been used to annotate Smpd4
  • Qualifier: involved_in
  • Curation Notes: (PMID:16517606), (PMID:25180167)
  • Original References(s): PMID:16517606 PMID:25180167


  • Go Back to source page   Continue to Ontology report