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GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking Msh6 and mismatch repair in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with MSH6 (Homo sapiens)
  • 27 RGD objects have been annotated to mismatch repair  (GO:0006298)
  • 9 papers in RGD have been used to annotate Msh6
  • Qualifier: involved_in
  • Curation Notes: (PMID:10871409), (PMID:23622243), (PMID:8782829)
  • Original References(s): PMID:10871409 PMID:23622243 PMID:8782829


  • An association has been curated linking Msh6 and mismatch repair in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
  •  
  • The annotation was made from van Boxtel R, etal., Carcinogenesis. 2008 Apr 15;.
  • 16 additional annotations were made from van Boxtel R, etal., Carcinogenesis. 2008 Apr 15;.
  • 27 RGD objects have been annotated to mismatch repair  (GO:0006298)
  • 9 papers in RGD have been used to annotate Msh6


  • An association has been curated linking Msh6 and mismatch repair in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with MSH6 (Homo sapiens)
  • 27 RGD objects have been annotated to mismatch repair  (GO:0006298)
  • 9 papers in RGD have been used to annotate Msh6
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: UniProtKB:P40692|UniProtKB:P43246 (PMID:23603115)
  • Original References(s): PMID:23603115


  • An association has been curated linking Msh6 and mismatch repair in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Msh6 (Mus musculus)
  • 27 RGD objects have been annotated to mismatch repair  (GO:0006298)
  • 9 papers in RGD have been used to annotate Msh6
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: MGI:109519|MGI:1858014|MGI:2151803|MGI:3653701|MGI:88039 (MGI:1100204|PMID:9390556), (MGI:2154151|PMID:11691815), (MGI:2388851|PMID:12370835), (MGI:3053495|PMID:15324697), (MGI:3692242|PMID:16728433), (MGI:5464025|PMID:23071719)
  • Original References(s): MGI:1100204 MGI:2154151 MGI:2388851 MGI:3053495 MGI:3692242 MGI:5464025 PMID:11691815 PMID:12370835 PMID:15324697 PMID:16728433 PMID:23071719 PMID:9390556


  • An association has been curated linking Msh6 and mismatch repair in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • The annotation has been inferred from biological aspect of ancestor with FB:FBgn0036486 & MGI:1343961 & PANTHER:PTN000145560 & PomBase:SPCC285.16c & Msh6 (Rattus norvegicus) & SGD:S000002504 & UniProtKB:P52701 & WB:WBGene00003422
  • 69839 additional annotations were made from Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
  • 27 RGD objects have been annotated to mismatch repair  (GO:0006298)
  • 9 papers in RGD have been used to annotate Msh6
  • Qualifier: involved_in
  • Curation Notes: PMID:21873635


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