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GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Xu Y, etal., Cell Rep. 2019 Oct 22;29(4):800-809.e5. doi: 10.1016/j.celrep.2019.09.028.
  • 25 additional annotations were made from Xu Y, etal., Cell Rep. 2019 Oct 22;29(4):800-809.e5. doi: 10.1016/j.celrep.2019.09.028.
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6


    • An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Ercc6 (Mus musculus)
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: MGI:1932102 (PMID:12509265), (PMID:9150142)
  • Original References(s): PMID:12509265 PMID:9150142


    • An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with MGI:1100494 & PANTHER:PTN001326493 & PomBase:SPCP25A2.02c & Ercc6 (Rattus norvegicus) & SGD:S000003796 & UniProtKB:Q03468
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:F8VPZ5 & ensembl:ENSMUSP00000066256
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


    • An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:Q03468 & ensembl:ENSP00000348089
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


    • An association has been curated linking Ercc6 and transcription-coupled nucleotide-excision repair in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with ERCC6 (Homo sapiens)
  • 14 RGD objects have been annotated to transcription-coupled nucleotide-excision repair  (GO:0006283)
  • 38 papers in RGD have been used to annotate Ercc6
  • Qualifier: involved_in
  • Curation Notes: (PMID:10564257), (PMID:26620705), (PMID:32355176), (PMID:34526721), (PMID:38316879), (PMID:38600235), (PMID:9565609)
  • Original References(s): PMID:10564257 PMID:26620705 PMID:32355176 PMID:34526721 PMID:38316879 PMID:38600235 PMID:9565609


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