Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Smc1a and nucleoplasm in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with Smc1a (Rattus norvegicus)
  • 3822 RGD objects have been annotated to nucleoplasm  (GO:0005654)
  • 12 papers in RGD have been used to annotate Smc1a
  • Curation Notes: MMO:0000662
  • Original References(s): PMID:10652260 REF_RGD_ID:1331378


    • An association has been curated linking Smc1a and nucleoplasm in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: MGI data from the GO Consortium
  • The annotation has been inferred from sequence orthology with Smc1a (Rattus norvegicus)
  • 3822 RGD objects have been annotated to nucleoplasm  (GO:0005654)
  • 12 papers in RGD have been used to annotate Smc1a
  • Qualifier: located_in
  • Original References(s): GO_REF:0000096 MGI:4417868


    • An association has been curated linking Smc1a and nucleoplasm in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: MGI data from the GO Consortium
  • The annotation has been inferred from sequence orthology with UniProtKB:Q14683
  • 3822 RGD objects have been annotated to nucleoplasm  (GO:0005654)
  • 12 papers in RGD have been used to annotate Smc1a
  • Qualifier: located_in
  • Original References(s): GO_REF:0000119 MGI:4834177


    • An association has been curated linking Smc1a and nucleoplasm in Mus musculus.        

  • The association was traceable author statement (TAS)
    		•  
  • The annotation was made from RGD pipelines: MGI data from the GO Consortium
  • 3822 RGD objects have been annotated to nucleoplasm  (GO:0005654)
  • 12 papers in RGD have been used to annotate Smc1a
  • Qualifier: located_in
  • Original References(s): Reactome:R-MMU-912355 Reactome:R-MMU-912362 Reactome:R-MMU-912423 Reactome:R-MMU-912449 Reactome:R-MMU-912468 Reactome:R-MMU-912506


    • Go Back to source page   Continue to Ontology report