Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Ufd1 and protein binding in Rattus norvegicus.        

  • The association was inferred from physical interaction (IPI)
    		•  
  • The annotation was made from Meyer HH, etal., EMBO J 2000 May 15;19(10):2181-92.
  • The annotation has been inferred from physical interaction with UniProtKB:Q9ES54
  • 25 additional annotations were made from Meyer HH, etal., EMBO J 2000 May 15;19(10):2181-92.
  • 14764 RGD objects have been annotated to protein binding  (GO:0005515)
  • 14 papers in RGD have been used to annotate Ufd1
  • Qualifier: enables
  • Curation Notes: PMID:10811609


    • An association has been curated linking Ufd1 and protein binding in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Ufd1 (Mus musculus)
  • 14764 RGD objects have been annotated to protein binding  (GO:0005515)
  • 14 papers in RGD have been used to annotate Ufd1
  • Qualifier: enables
  • Curation Notes: UniProtKB:Q01853|UniProtKB:Q9ES54 (MGI:5440826|PMID:22773186), (MGI:5634894|PMID:10811609), (MGI:5914283|PMID:22232657), (MGI:6092812|PMID:17202270)
  • Original References(s): MGI:5440826 MGI:5634894 MGI:5914283 MGI:6092812 PMID:10811609 PMID:17202270 PMID:22232657 PMID:22773186


    • An association has been curated linking Ufd1 and protein binding in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with UFD1 (Homo sapiens)
  • 14764 RGD objects have been annotated to protein binding  (GO:0005515)
  • 14 papers in RGD have been used to annotate Ufd1
  • Qualifier: enables
  • Curation Notes: UniProtKB:P42858|UniProtKB:P55072|UniProtKB:Q8TAT6|UniProtKB:Q9UKV5 (PMID:11574150), (PMID:17681147), (PMID:18775313), (PMID:20414249), (PMID:21645854), (PMID:25959826), (PMID:26712280), (PMID:32296183), (PMID:32814053)
  • Original References(s): PMID:11574150 PMID:17681147 PMID:18775313 PMID:20414249 PMID:21645854 PMID:25959826 PMID:26712280 PMID:32296183 PMID:32814053


    • Go Back to source page   Continue to Ontology report