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GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Shmt1 and Breast Neoplasms in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Lissowska J, etal., Int J Cancer. 2007 Jun 15;120(12):2696-703.
  • The annotation has been inferred from sequence orthology with SHMT1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Lissowska J, etal., Int J Cancer. 2007 Jun 15;120(12):2696-703.
  • 1374 RGD objects have been annotated to Breast Neoplasms  (DOID:9008939)
  • 15 papers in RGD have been used to annotate Shmt1


    • An association has been curated linking Shmt1 and Breast Neoplasms in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SHMT1 (Homo sapiens) [(EXP) inferred from experiment]
  • 1374 RGD objects have been annotated to Breast Neoplasms  (DOID:9008939)
  • 15 papers in RGD have been used to annotate Shmt1
  • Curation Notes: CTD Direct Evidence: marker/mechanism
  • Original References(s): PMID:17595805


    • An association has been curated linking Shmt1 and Breast Neoplasms in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with SHMT1 (Homo sapiens)
  • 1374 RGD objects have been annotated to Breast Neoplasms  (DOID:9008939)
  • 15 papers in RGD have been used to annotate Shmt1
  • Qualifier: no_association
  • Curation Notes: DNA:SNP:CDS:no association between SNP rs1979277, rs1979276 or rs3783 and susceptibility to breast cancer
  • Original References(s): PMID:17311260 REF_RGD_ID:2300328


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