Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking BRCA1 and Experimental Mammary Neoplasms in Homo sapiens.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Okochi E, etal., Mol Carcinog. 2002 Aug;34(4):211-8.
  • The annotation has been inferred from sequence orthology with Brca1 (Rattus norvegicus) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Okochi E, etal., Mol Carcinog. 2002 Aug;34(4):211-8.
  • 290 RGD objects have been annotated to Experimental Mammary Neoplasms  (DOID:9005233)
  • 49 papers in RGD have been used to annotate BRCA1
  • Curation Notes: Protein:decrease expression


    • An association has been curated linking BRCA1 and Experimental Mammary Neoplasms in Homo sapiens.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Hoshino A, etal., Int J Biol Sci. 2007 Apr 25;3(5):281-91.
  • 2 additional annotations were made from Hoshino A, etal., Int J Biol Sci. 2007 Apr 25;3(5):281-91.
  • 290 RGD objects have been annotated to Experimental Mammary Neoplasms  (DOID:9005233)
  • 49 papers in RGD have been used to annotate BRCA1


    • An association has been curated linking BRCA1 and Experimental Mammary Neoplasms in Homo sapiens.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Shakya R, etal., Proc Natl Acad Sci U S A. 2008 May 13;105(19):7040-5. Epub 2008 Apr 28.
  • The annotation has been inferred from sequence orthology with Brca1 (Mus musculus) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Shakya R, etal., Proc Natl Acad Sci U S A. 2008 May 13;105(19):7040-5. Epub 2008 Apr 28.
  • 290 RGD objects have been annotated to Experimental Mammary Neoplasms  (DOID:9005233)
  • 49 papers in RGD have been used to annotate BRCA1
  • Qualifier: susceptibility


    • An association has been curated linking BRCA1 and Experimental Mammary Neoplasms in Homo sapiens.        

  • The association was inferred from experiment (EXP)
    		•  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • 290 RGD objects have been annotated to Experimental Mammary Neoplasms  (DOID:9005233)
  • 49 papers in RGD have been used to annotate BRCA1
  • Curation Notes: CTD Direct Evidence: marker/mechanism
  • Original References(s): PMID:12203372 PMID:22767648


    • Go Back to source page   Continue to Ontology report