Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Cdkn2a and Ovarian Neoplasms in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Kommoss S, etal., Br J Cancer. 2007 Jan 29;96(2):306-13.
  • The annotation has been inferred from sequence orthology with CDKN2A (Homo sapiens) [(IEP) inferred from expression pattern]
  • 5 additional annotations were made from Kommoss S, etal., Br J Cancer. 2007 Jan 29;96(2):306-13.
  • 583 RGD objects have been annotated to Ovarian Neoplasms  (DOID:9002762)
  • 102 papers in RGD have been used to annotate Cdkn2a
  • Qualifier: disease_progression


    • An association has been curated linking Cdkn2a and Ovarian Neoplasms in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from O'Neill CJ, etal., Histopathology. 2007 May;50(6):773-9.
  • The annotation has been inferred from sequence orthology with CDKN2A (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from O'Neill CJ, etal., Histopathology. 2007 May;50(6):773-9.
  • 583 RGD objects have been annotated to Ovarian Neoplasms  (DOID:9002762)
  • 102 papers in RGD have been used to annotate Cdkn2a
  • Qualifier: severity


    • An association has been curated linking Cdkn2a and Ovarian Neoplasms in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Wiley A, etal., Cancer. 2006 Jul 15;107(2):299-308.
  • The annotation has been inferred from sequence orthology with CDKN2A (Homo sapiens) [(IDA) inferred from direct assay]
  • 2 additional annotations were made from Wiley A, etal., Cancer. 2006 Jul 15;107(2):299-308.
  • 583 RGD objects have been annotated to Ovarian Neoplasms  (DOID:9002762)
  • 102 papers in RGD have been used to annotate Cdkn2a
  • Curation Notes: DNA:hypermethylation:promoter


    • An association has been curated linking Cdkn2a and Ovarian Neoplasms in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CDKN2A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 583 RGD objects have been annotated to Ovarian Neoplasms  (DOID:9002762)
  • 102 papers in RGD have been used to annotate Cdkn2a
  • Curation Notes: ClinVar Annotator: match by term: Ovarian Neoplasms
  • Original References(s): PMID:10738302 PMID:16397522 PMID:16896043 PMID:17713569 PMID:18025365 PMID:18337833 PMID:19523171 PMID:20093296 PMID:25023876 PMID:25741868 PMID:25780468 PMID:26467025 PMID:26581427 PMID:26681309 PMID:26775776 PMID:28492532 PMID:29263814 PMID:31567591 PMID:7881419 PMID:8570179 PMID:8653684 PMID:8727306 PMID:9916806


    • Go Back to source page   Continue to Ontology report